CuGenDBv2

Gene ID	PI0026215
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Drebrin-like
Genome location	chr01:17348172..17348867
RNA-Seq Expression	PI0026215
Synteny	PI0026215
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0032726.1 drebrin-like [Cucumis melo var. makuwa]

4.1e-23

40.54

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Query:  MSSRHDNIIALDKAVLLYCILEELSINSGEIVCRQIHSWVRHPRGARPFPHLIEQLCLKAIPVLKTFLTIPIKDGLCSITGLRRIINLHKNKAETRHLKT
        M +RHDN I++DK VL+YCI+EEL +N GEI+C  I +WV+HP+G+RPFPHLIE+LCLKA P L+    + +KD + + + L   I +HKNK+  +HLKT
Subjt:  MSSRHDNIIALDKAVLLYCILEELSINSGEIVCRQIHSWVRHPRGARPFPHLIEQLCLKAIPVLKTFLTIPIKDGLCSITGLRRIINLHKNKAETRHLKT

Query:  LKGGKGEKEDDEMEID-DEEMESPTTVPLVRKRKGKEEAFGSKKKKRHKAKDSNDPIPLAVESPPKQKTRM-STIPPSPPKAIEE
               K +    I   EE+  P    L  K K      GS +K  H++   +DP     ++  + + R      PSPPK+  E
Subjt:  LKGGKGEKEDDEMEID-DEEMESPTTVPLVRKRKGKEEAFGSKKKKRHKAKDSNDPIPLAVESPPKQKTRM-STIPPSPPKAIEE

KAA0058409.1 hypothetical protein E6C27_scaffold409G001210 [Cucumis melo var. makuwa]

2.7e-35

53.61

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Query:  MSSRHDNIIALDKAVLLYCILEELSINSGEIVCRQIHSWVRHPRGARPFPHLIEQLCLKAIPVLKTFLTIPIKDGLCSITGLRRIINLHKNKAETRHLKT
        M +  DN+I++DK +LLYC +EE+ +N G+I+C  I +WVRHP  ARP P+LIEQ+ LKA   LK  L   +KD +C+IT +  +INL+KNKAE + LKT
Subjt:  MSSRHDNIIALDKAVLLYCILEELSINSGEIVCRQIHSWVRHPRGARPFPHLIEQLCLKAIPVLKTFLTIPIKDGLCSITGLRRIINLHKNKAETRHLKT

Query:  LKGGKGEKEDDEMEID-DEEMESPTTVPLVRKRKGKEEAFGSKKKKRH-KAKDSNDPIPLA-VESP
         K  +  KEDD+MEID +EE E  T  PL+RK KG+ +AFGS+K+KR  KAKDS D +PLA + SP
Subjt:  LKGGKGEKEDDEMEID-DEEMESPTTVPLVRKRKGKEEAFGSKKKKRH-KAKDSNDPIPLA-VESP

KAA0066376.1 hypothetical protein E6C27_scaffold21G004490 [Cucumis melo var. makuwa]

4.5e-22

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Query:  MSSRHDNIIALDKAVLLYCILEELSINSGEIVCRQIHSWVRHPRGARPFPHLIEQLCLKAIPVLKTFLTIPIKDGLCSITGLRRIINLHKNKAETRHLKT
        M +R ++I+++D+ +L+YCI+EEL +N GEI+C  I   V+HP GAR FPHLIE+LCLK    L+    + +KDG+C+   L RII +HKNKA  + LKT
Subjt:  MSSRHDNIIALDKAVLLYCILEELSINSGEIVCRQIHSWVRHPRGARPFPHLIEQLCLKAIPVLKTFLTIPIKDGLCSITGLRRIINLHKNKAETRHLKT

Query:  LKGG
         K G
Subjt:  LKGG

KGN57727.1 hypothetical protein Csa_009739 [Cucumis sativus]

2.2e-24

42.76

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Query:  MSSRHDNIIALDKAVLLYCILEELSINSGEIVCRQIHSWVRHPRGARPFPHLIEQLCLKAIPVLKTFLTIPIKDGLCSITGLRRIINLHKNKAETRHLKT
        M +RH + I++++ +L+YCI++++ +N G+I+   I + V+HPRGARPF +LIEQLCL+A  +L+    + +KDG+   + L RII +HKNKA+ + LKT
Subjt:  MSSRHDNIIALDKAVLLYCILEELSINSGEIVCRQIHSWVRHPRGARPFPHLIEQLCLKAIPVLKTFLTIPIKDGLCSITGLRRIINLHKNKAETRHLKT

Query:  LKGGKGEKEDDEMEIDDEEMESPTTVPLVRKRKGKEEAFGSKKKKRHKAKDS
         +G K  KE D+ ++++E+ +    +P  RKR+ KE+  GSKK K  K +DS
Subjt:  LKGGKGEKEDDEMEIDDEEMESPTTVPLVRKRKGKEEAFGSKKKKRHKAKDS

TYK00908.1 hypothetical protein E5676_scaffold602G00710 [Cucumis melo var. makuwa]

4.5e-22

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Query:  MSSRHDNIIALDKAVLLYCILEELSINSGEIVCRQIHSWVRHPRGARPFPHLIEQLCLKAIPVLKTFLTIPIKDGLCSITGLRRIINLHKNKAETRHLKT
        M +R ++I+++D+ +L+YCI+EEL +N GEI+C  I   V+HP GAR FPHLIE+LCLK    L+    + +KDG+C+   L RII +HKNKA  + LKT
Subjt:  MSSRHDNIIALDKAVLLYCILEELSINSGEIVCRQIHSWVRHPRGARPFPHLIEQLCLKAIPVLKTFLTIPIKDGLCSITGLRRIINLHKNKAETRHLKT

Query:  LKGG
         K G
Subjt:  LKGG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LAN0 Uncharacterized protein

1.1e-24

42.76

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Query:  MSSRHDNIIALDKAVLLYCILEELSINSGEIVCRQIHSWVRHPRGARPFPHLIEQLCLKAIPVLKTFLTIPIKDGLCSITGLRRIINLHKNKAETRHLKT
        M +RH + I++++ +L+YCI++++ +N G+I+   I + V+HPRGARPF +LIEQLCL+A  +L+    + +KDG+   + L RII +HKNKA+ + LKT
Subjt:  MSSRHDNIIALDKAVLLYCILEELSINSGEIVCRQIHSWVRHPRGARPFPHLIEQLCLKAIPVLKTFLTIPIKDGLCSITGLRRIINLHKNKAETRHLKT

Query:  LKGGKGEKEDDEMEIDDEEMESPTTVPLVRKRKGKEEAFGSKKKKRHKAKDS
         +G K  KE D+ ++++E+ +    +P  RKR+ KE+  GSKK K  K +DS
Subjt:  LKGGKGEKEDDEMEIDDEEMESPTTVPLVRKRKGKEEAFGSKKKKRHKAKDS

A0A5A7SRQ1 Drebrin-like

2.0e-23

40.54

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Query:  MSSRHDNIIALDKAVLLYCILEELSINSGEIVCRQIHSWVRHPRGARPFPHLIEQLCLKAIPVLKTFLTIPIKDGLCSITGLRRIINLHKNKAETRHLKT
        M +RHDN I++DK VL+YCI+EEL +N GEI+C  I +WV+HP+G+RPFPHLIE+LCLKA P L+    + +KD + + + L   I +HKNK+  +HLKT
Subjt:  MSSRHDNIIALDKAVLLYCILEELSINSGEIVCRQIHSWVRHPRGARPFPHLIEQLCLKAIPVLKTFLTIPIKDGLCSITGLRRIINLHKNKAETRHLKT

Query:  LKGGKGEKEDDEMEID-DEEMESPTTVPLVRKRKGKEEAFGSKKKKRHKAKDSNDPIPLAVESPPKQKTRM-STIPPSPPKAIEE
               K +    I   EE+  P    L  K K      GS +K  H++   +DP     ++  + + R      PSPPK+  E
Subjt:  LKGGKGEKEDDEMEID-DEEMESPTTVPLVRKRKGKEEAFGSKKKKRHKAKDSNDPIPLAVESPPKQKTRM-STIPPSPPKAIEE

A0A5A7VJ48 Uncharacterized protein

2.2e-22

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Query:  MSSRHDNIIALDKAVLLYCILEELSINSGEIVCRQIHSWVRHPRGARPFPHLIEQLCLKAIPVLKTFLTIPIKDGLCSITGLRRIINLHKNKAETRHLKT
        M +R ++I+++D+ +L+YCI+EEL +N GEI+C  I   V+HP GAR FPHLIE+LCLK    L+    + +KDG+C+   L RII +HKNKA  + LKT
Subjt:  MSSRHDNIIALDKAVLLYCILEELSINSGEIVCRQIHSWVRHPRGARPFPHLIEQLCLKAIPVLKTFLTIPIKDGLCSITGLRRIINLHKNKAETRHLKT

Query:  LKGG
         K G
Subjt:  LKGG

A0A5D3BPB1 Uncharacterized protein

2.2e-22

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Query:  MSSRHDNIIALDKAVLLYCILEELSINSGEIVCRQIHSWVRHPRGARPFPHLIEQLCLKAIPVLKTFLTIPIKDGLCSITGLRRIINLHKNKAETRHLKT
        M +R ++I+++D+ +L+YCI+EEL +N GEI+C  I   V+HP GAR FPHLIE+LCLK    L+    + +KDG+C+   L RII +HKNKA  + LKT
Subjt:  MSSRHDNIIALDKAVLLYCILEELSINSGEIVCRQIHSWVRHPRGARPFPHLIEQLCLKAIPVLKTFLTIPIKDGLCSITGLRRIINLHKNKAETRHLKT

Query:  LKGG
         K G
Subjt:  LKGG

A0A5D3C0C3 Uncharacterized protein

1.3e-35

53.61

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Query:  MSSRHDNIIALDKAVLLYCILEELSINSGEIVCRQIHSWVRHPRGARPFPHLIEQLCLKAIPVLKTFLTIPIKDGLCSITGLRRIINLHKNKAETRHLKT
        M +  DN+I++DK +LLYC +EE+ +N G+I+C  I +WVRHP  ARP P+LIEQ+ LKA   LK  L   +KD +C+IT +  +INL+KNKAE + LKT
Subjt:  MSSRHDNIIALDKAVLLYCILEELSINSGEIVCRQIHSWVRHPRGARPFPHLIEQLCLKAIPVLKTFLTIPIKDGLCSITGLRRIINLHKNKAETRHLKT

Query:  LKGGKGEKEDDEMEID-DEEMESPTTVPLVRKRKGKEEAFGSKKKKRH-KAKDSNDPIPLA-VESP
         K  +  KEDD+MEID +EE E  T  PL+RK KG+ +AFGS+K+KR  KAKDS D +PLA + SP
Subjt:  LKGGKGEKEDDEMEID-DEEMESPTTVPLVRKRKGKEEAFGSKKKKRH-KAKDSNDPIPLA-VESP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGTCGTCACGCCACGACAACATTATCGCGTTGGACAAAGCGGTGCTCCTCTATTGCATTTTGGAGGAGTTGTCAATCAACTCGGGCGAGATAGTTTGTCGACAAATCCA
TTCATGGGTGAGGCATCCACGCGGCGCAAGACCCTTCCCGCACTTGATAGAACAATTATGTTTAAAGGCAATCCCTGTGTTGAAGACTTTCCTTACAATACCCATCAAAG
ATGGCCTGTGTTCCATTACAGGCCTTCGACGCATCATTAACCTCCATAAGAACAAGGCTGAAACGAGACACCTCAAAACCTTAAAAGGTGGAAAAGGTGAGAAAGAGGAT
GATGAAATGGAGATTGATGATGAAGAAATGGAAAGTCCAACAACAGTCCCACTCGTTCGCAAGAGGAAAGGCAAGGAAGAGGCCTTTGGGTCTAAGAAGAAGAAAAGGCA
CAAGGCCAAGGATTCCAATGATCCTATTCCTCTTGCGGTTGAAAGCCCACCCAAGCAGAAAACGCGCATGTCCACCATCCCGCCTTCACCCCCTAAGGCAATAGAAGAAC
CACCACTTCTCCCAATAATCCAAATTCCTTCTCCCCAAGCATCCAAAACGCCAAGCTCTGTCCAGCAAGTCCAAATAATTTCCACTCCCACTTTCCCGCGACAAGAGGAA
AATCCTCAATCTCTTGTCGCGCAAGCCCTTGACTAA

mRNA sequence

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Protein sequence

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MSSRHDNIIALDKAVLLYCILEELSINSGEIVCRQIHSWVRHPRGARPFPHLIEQLCLKAIPVLKTFLTIPIKDGLCSITGLRRIINLHKNKAETRHLKTLKGGKGEKED
DEMEIDDEEMESPTTVPLVRKRKGKEEAFGSKKKKRHKAKDSNDPIPLAVESPPKQKTRMSTIPPSPPKAIEEPPLLPIIQIPSPQASKTPSSVQQVQIISTPTFPRQEE
NPQSLVAQALD

PI0026215 (gene) of Melon (PI 482460) v1 genome