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PI0026244 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026244
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr12:7510227..7510433
RNA-Seq ExpressionPI0026244
SyntenyPI0026244
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040602.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.9e-1670.77Show/hide
Query:  MDKDAVMENITNICTMKHLQTYQIHKSTNKNQRIKRSQGNIKFRIDGDNQLKIDDVRIVEHIDFL
        MD D  M NI NIC MKHLQ YQI KSTNKNQR KR++ NI+ R+D +NQL+IDDVR+VEHIDFL
Subjt:  MDKDAVMENITNICTMKHLQTYQIHKSTNKNQRIKRSQGNIKFRIDGDNQLKIDDVRIVEHIDFL

KAA0041168.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]3.5e-1575.44Show/hide
Query:  NITNICTMKHLQTYQIHKSTNKNQRIKRSQGNIKFRIDGDNQLKIDDVRIVEHIDFL
        NITNIC MKHLQ YQI KSTNKNQR KR++ NI+FR++ DNQLKID+V++VEHIDFL
Subjt:  NITNICTMKHLQTYQIHKSTNKNQRIKRSQGNIKFRIDGDNQLKIDDVRIVEHIDFL

KAA0065673.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]8.7e-0670.73Show/hide
Query:  MDKDAVMENITNICTMKHLQTYQIHKSTNKNQRIKRSQGNI
        MD D  M NITNIC MKHLQ YQI KSTNKNQR KR++ +I
Subjt:  MDKDAVMENITNICTMKHLQTYQIHKSTNKNQRIKRSQGNI

KAA0066693.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.3e-1373.21Show/hide
Query:  MDKDAVMENITNICTMKHLQTYQIHKSTNKNQRIKRSQGNIKFRIDGDNQLKIDDV
        MD D  M NITNIC MKHLQ YQI KSTNKNQR KR++ NI+FR+D DNQL+IDDV
Subjt:  MDKDAVMENITNICTMKHLQTYQIHKSTNKNQRIKRSQGNIKFRIDGDNQLKIDDV

TYK08229.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]8.7e-0670.73Show/hide
Query:  MDKDAVMENITNICTMKHLQTYQIHKSTNKNQRIKRSQGNI
        MD D  M NITNIC MKHLQ YQI KSTNKNQR KR++ +I
Subjt:  MDKDAVMENITNICTMKHLQTYQIHKSTNKNQRIKRSQGNI

TrEMBL top hitse value%identityAlignment
A0A5A7TDY5 Serine/threonine-protein phosphatase 7 long form-like protein1.7e-1575.44Show/hide
Query:  NITNICTMKHLQTYQIHKSTNKNQRIKRSQGNIKFRIDGDNQLKIDDVRIVEHIDFL
        NITNIC MKHLQ YQI KSTNKNQR KR++ NI+FR++ DNQLKID+V++VEHIDFL
Subjt:  NITNICTMKHLQTYQIHKSTNKNQRIKRSQGNIKFRIDGDNQLKIDDVRIVEHIDFL

A0A5A7VBU8 GATA zinc finger domain-containing protein 10-like isoform X24.2e-0670.73Show/hide
Query:  MDKDAVMENITNICTMKHLQTYQIHKSTNKNQRIKRSQGNI
        MD D  M NITNIC MKHLQ YQI KSTNKNQR KR++ +I
Subjt:  MDKDAVMENITNICTMKHLQTYQIHKSTNKNQRIKRSQGNI

A0A5A7VF64 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.6e-1373.21Show/hide
Query:  MDKDAVMENITNICTMKHLQTYQIHKSTNKNQRIKRSQGNIKFRIDGDNQLKIDDV
        MD D  M NITNIC MKHLQ YQI KSTNKNQR KR++ NI+FR+D DNQL+IDDV
Subjt:  MDKDAVMENITNICTMKHLQTYQIHKSTNKNQRIKRSQGNIKFRIDGDNQLKIDDV

A0A5D3C2V9 Mediator of RNA polymerase II transcription subunit 12-like isoform X19.0e-1770.77Show/hide
Query:  MDKDAVMENITNICTMKHLQTYQIHKSTNKNQRIKRSQGNIKFRIDGDNQLKIDDVRIVEHIDFL
        MD D  M NI NIC MKHLQ YQI KSTNKNQR KR++ NI+ R+D +NQL+IDDVR+VEHIDFL
Subjt:  MDKDAVMENITNICTMKHLQTYQIHKSTNKNQRIKRSQGNIKFRIDGDNQLKIDDVRIVEHIDFL

A0A5D3CD18 GATA zinc finger domain-containing protein 10-like isoform X24.2e-0670.73Show/hide
Query:  MDKDAVMENITNICTMKHLQTYQIHKSTNKNQRIKRSQGNI
        MD D  M NITNIC MKHLQ YQI KSTNKNQR KR++ +I
Subjt:  MDKDAVMENITNICTMKHLQTYQIHKSTNKNQRIKRSQGNI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAGGACGCAGTCATGGAGAACATAACAAATATTTGTACTATGAAGCACCTGCAGACGTATCAGATCCACAAGAGTACCAACAAGAACCAAAGAATCAAGAGGAG
CCAGGGCAACATAAAGTTCAGAATCGACGGTGACAACCAGCTCAAAATCGACGACGTTCGGATTGTGGAACACATTGATTTTCTTTATATCTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACAAGGACGCAGTCATGGAGAACATAACAAATATTTGTACTATGAAGCACCTGCAGACGTATCAGATCCACAAGAGTACCAACAAGAACCAAAGAATCAAGAGGAG
CCAGGGCAACATAAAGTTCAGAATCGACGGTGACAACCAGCTCAAAATCGACGACGTTCGGATTGTGGAACACATTGATTTTCTTTATATCTTTTAA
Protein sequenceShow/hide protein sequence
MDKDAVMENITNICTMKHLQTYQIHKSTNKNQRIKRSQGNIKFRIDGDNQLKIDDVRIVEHIDFLYIF