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PI0026263 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026263
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol
Genome locationchr05:13057650..13058408
RNA-Seq ExpressionPI0026263
SyntenyPI0026263
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037287.1 hypothetical protein E6C27_scaffold68G00220 [Cucumis melo var. makuwa]2.8e-0938.54Show/hide
Query:  TTVPLIHKRKGEEEASGSKKKKKH-KAKDLSDPIPLAIESPP---------KQKKPKSTISSSPPKAIKESSLLPI--IQIPSPQTSKTPSPIHQVQIIT
        T   ++  +KGE+EAS SKK++K  K K+  DP PL I +PP           K PK T SS+     K  + LP   IQ  +P+ SKT SP  Q+Q  T
Subjt:  TTVPLIHKRKGEEEASGSKKKKKH-KAKDLSDPIPLAIESPP---------KQKKPKSTISSSPPKAIKESSLLPI--IQIPSPQTSKTPSPIHQVQIIT

Query:  TPTSLRQEENPQSLVPQALDQTTFSPNIIFYAQLNEG-----IDGFMQELCNTDFDAED-FRETEDATLVPDESQQTEVLEEPVNDPLPKGK
        T TS+RQEENP +LV    +QT   P+ +     N+G      + F   LC+     ED  ++ ++A+LVP      EVLE  ++DPL K K
Subjt:  TPTSLRQEENPQSLVPQALDQTTFSPNIIFYAQLNEG-----IDGFMQELCNTDFDAED-FRETEDATLVPDESQQTEVLEEPVNDPLPKGK

KAA0038296.1 hypothetical protein E6C27_scaffold270G001610 [Cucumis melo var. makuwa]8.5e-1444.64Show/hide
Query:  DGFMQELCNTDFDAED-FRETEDATLVPDESQQTEVLEEPVNDPLPKGKEIAFEVAGETRAPSPSKQTEDQQNIAAEENDDEDFYKFINEAIGKPMMDGL
        D     +C+     ED  +  ED +LVP  S + EVLE+ V+DPL KGK I  ++A ET  PSP K+T  Q + A E +D ++++KFI    GKPM DG 
Subjt:  DGFMQELCNTDFDAED-FRETEDATLVPDESQQTEVLEEPVNDPLPKGKEIAFEVAGETRAPSPSKQTEDQQNIAAEENDDEDFYKFINEAIGKPMMDGL

Query:  EDIFQNQADLHE
        ED+FQ QA+  E
Subjt:  EDIFQNQADLHE

KAA0053481.1 protein MNN4-like [Cucumis melo var. makuwa]6.3e-0939.29Show/hide
Query:  KESSLLPIIQIPSPQTSKTPSPIHQVQIITTPTSLRQEENPQSLVPQALDQTTFSPNIIFYAQLNEGIDGFMQELCNTDFDA-----EDFRETEDATLVP
        K  +  P+ +    +   + SP HQVQIIT P+SLRQEENPQ+LV   LD TT     +  + +++G D F     ++ +D      + F++  D  L P
Subjt:  KESSLLPIIQIPSPQTSKTPSPIHQVQIITTPTSLRQEENPQSLVPQALDQTTFSPNIIFYAQLNEGIDGFMQELCNTDFDA-----EDFRETEDATLVP

Query:  DESQQTEVLEEPVNDPLPKGKEIAFEVAGETRAPSPSKQT
          S   EVLE+ V+DPL KGK+I+ +  GE R  S  KQT
Subjt:  DESQQTEVLEEPVNDPLPKGKEIAFEVAGETRAPSPSKQT

TYK19850.1 hypothetical protein E5676_scaffold811G00610 [Cucumis melo var. makuwa]2.5e-1346.39Show/hide
Query:  EDFRETEDATLVPDESQQTEVLEEPVNDPLPKGKEIAFEVAGETRAPSPSKQTEDQQNIAAEENDDEDFYKFINEAIGKPMMDGLEDIFQNQADLHE
        ++ +  ED +LVP  S + EVLE+ V+DPL KGK I  ++A ET  PSP K+T  Q + A E ++ ++++KFI    GKPM DG ED+FQ QA+  E
Subjt:  EDFRETEDATLVPDESQQTEVLEEPVNDPLPKGKEIAFEVAGETRAPSPSKQTEDQQNIAAEENDDEDFYKFINEAIGKPMMDGLEDIFQNQADLHE

TYK23898.1 gag-pol [Cucumis melo var. makuwa]5.0e-1459.49Show/hide
Query:  EVLEEPVNDPLPKGKEIAFEVAGETRAPSPSKQTEDQQNIAAEENDDED-FYKFINEAIGKPMMDGLEDIFQNQADLHE
        +V EEPV+D L KGK+IA+E  GE   PSP KQT +QQ+    E+DDED ++KFI++  GKPMMD LEDIFQ Q+DL E
Subjt:  EVLEEPVNDPLPKGKEIAFEVAGETRAPSPSKQTEDQQNIAAEENDDED-FYKFINEAIGKPMMDGLEDIFQNQADLHE

TrEMBL top hitse value%identityAlignment
A0A5A7T7V1 Uncharacterized protein4.1e-1444.64Show/hide
Query:  DGFMQELCNTDFDAED-FRETEDATLVPDESQQTEVLEEPVNDPLPKGKEIAFEVAGETRAPSPSKQTEDQQNIAAEENDDEDFYKFINEAIGKPMMDGL
        D     +C+     ED  +  ED +LVP  S + EVLE+ V+DPL KGK I  ++A ET  PSP K+T  Q + A E +D ++++KFI    GKPM DG 
Subjt:  DGFMQELCNTDFDAED-FRETEDATLVPDESQQTEVLEEPVNDPLPKGKEIAFEVAGETRAPSPSKQTEDQQNIAAEENDDEDFYKFINEAIGKPMMDGL

Query:  EDIFQNQADLHE
        ED+FQ QA+  E
Subjt:  EDIFQNQADLHE

A0A5D3BSJ3 Protein MNN4-like3.0e-0939.29Show/hide
Query:  KESSLLPIIQIPSPQTSKTPSPIHQVQIITTPTSLRQEENPQSLVPQALDQTTFSPNIIFYAQLNEGIDGFMQELCNTDFDA-----EDFRETEDATLVP
        K  +  P+ +    +   + SP HQVQIIT P+SLRQEENPQ+LV   LD TT     +  + +++G D F     ++ +D      + F++  D  L P
Subjt:  KESSLLPIIQIPSPQTSKTPSPIHQVQIITTPTSLRQEENPQSLVPQALDQTTFSPNIIFYAQLNEGIDGFMQELCNTDFDA-----EDFRETEDATLVP

Query:  DESQQTEVLEEPVNDPLPKGKEIAFEVAGETRAPSPSKQT
          S   EVLE+ V+DPL KGK+I+ +  GE R  S  KQT
Subjt:  DESQQTEVLEEPVNDPLPKGKEIAFEVAGETRAPSPSKQT

A0A5D3C6C6 Uncharacterized protein1.4e-0938.54Show/hide
Query:  TTVPLIHKRKGEEEASGSKKKKKH-KAKDLSDPIPLAIESPP---------KQKKPKSTISSSPPKAIKESSLLPI--IQIPSPQTSKTPSPIHQVQIIT
        T   ++  +KGE+EAS SKK++K  K K+  DP PL I +PP           K PK T SS+     K  + LP   IQ  +P+ SKT SP  Q+Q  T
Subjt:  TTVPLIHKRKGEEEASGSKKKKKH-KAKDLSDPIPLAIESPP---------KQKKPKSTISSSPPKAIKESSLLPI--IQIPSPQTSKTPSPIHQVQIIT

Query:  TPTSLRQEENPQSLVPQALDQTTFSPNIIFYAQLNEG-----IDGFMQELCNTDFDAED-FRETEDATLVPDESQQTEVLEEPVNDPLPKGK
        T TS+RQEENP +LV    +QT   P+ +     N+G      + F   LC+     ED  ++ ++A+LVP      EVLE  ++DPL K K
Subjt:  TPTSLRQEENPQSLVPQALDQTTFSPNIIFYAQLNEG-----IDGFMQELCNTDFDAED-FRETEDATLVPDESQQTEVLEEPVNDPLPKGK

A0A5D3D8Q5 Uncharacterized protein1.2e-1346.39Show/hide
Query:  EDFRETEDATLVPDESQQTEVLEEPVNDPLPKGKEIAFEVAGETRAPSPSKQTEDQQNIAAEENDDEDFYKFINEAIGKPMMDGLEDIFQNQADLHE
        ++ +  ED +LVP  S + EVLE+ V+DPL KGK I  ++A ET  PSP K+T  Q + A E ++ ++++KFI    GKPM DG ED+FQ QA+  E
Subjt:  EDFRETEDATLVPDESQQTEVLEEPVNDPLPKGKEIAFEVAGETRAPSPSKQTEDQQNIAAEENDDEDFYKFINEAIGKPMMDGLEDIFQNQADLHE

A0A5D3DK59 Gag-pol2.4e-1459.49Show/hide
Query:  EVLEEPVNDPLPKGKEIAFEVAGETRAPSPSKQTEDQQNIAAEENDDED-FYKFINEAIGKPMMDGLEDIFQNQADLHE
        +V EEPV+D L KGK+IA+E  GE   PSP KQT +QQ+    E+DDED ++KFI++  GKPMMD LEDIFQ Q+DL E
Subjt:  EVLEEPVNDPLPKGKEIAFEVAGETRAPSPSKQTEDQQNIAAEENDDED-FYKFINEAIGKPMMDGLEDIFQNQADLHE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGTCCAACAACAGTCCCACTCATTCACAAGAGAAAAGGCGAGGAAGAGGCCTCTGGGTCCAAGAAGAAAAAGAAGCATAAGGCTAAGGATTTAAGTGATCCTAT
TCCTCTCGCGATTGAAAGCCCACCAAAACAGAAAAAGCCTAAGTCCACCATCTCGTCTTCACCCCCTAAGGCAATAAAAGAATCATCACTTCTCCCAATAATCCAAATTC
CTTCTCCTCAAACATCTAAAACGCCAAGCCCTATCCATCAAGTCCAAATAATTACCACTCCCACTTCCCTGCGGCAAGAGGAAAATCCTCAATCTCTTGTCCCGCAAGCC
CTTGATCAAACTACCTTTTCGCCCAACATTATTTTTTATGCCCAACTTAACGAAGGGATTGATGGCTTCATGCAAGAGCTTTGCAATACAGACTTTGATGCTGAAGATTT
CAGAGAAACAGAGGACGCGACTCTAGTTCCTGATGAGTCGCAACAAACAGAAGTTCTTGAGGAGCCAGTTAATGACCCACTCCCCAAAGGTAAAGAAATAGCCTTTGAGG
TAGCTGGTGAAACACGAGCTCCTTCACCATCGAAGCAAACAGAAGACCAACAAAACATTGCGGCGGAAGAAAATGACGATGAAGATTTTTACAAGTTCATCAATGAGGCG
ATTGGGAAGCCAATGATGGATGGACTTGAAGATATCTTCCAAAACCAAGCCGATCTGCATGAACGCGTGATAGATTTCAGACTTGGAGTTAAAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGTCCAACAACAGTCCCACTCATTCACAAGAGAAAAGGCGAGGAAGAGGCCTCTGGGTCCAAGAAGAAAAAGAAGCATAAGGCTAAGGATTTAAGTGATCCTAT
TCCTCTCGCGATTGAAAGCCCACCAAAACAGAAAAAGCCTAAGTCCACCATCTCGTCTTCACCCCCTAAGGCAATAAAAGAATCATCACTTCTCCCAATAATCCAAATTC
CTTCTCCTCAAACATCTAAAACGCCAAGCCCTATCCATCAAGTCCAAATAATTACCACTCCCACTTCCCTGCGGCAAGAGGAAAATCCTCAATCTCTTGTCCCGCAAGCC
CTTGATCAAACTACCTTTTCGCCCAACATTATTTTTTATGCCCAACTTAACGAAGGGATTGATGGCTTCATGCAAGAGCTTTGCAATACAGACTTTGATGCTGAAGATTT
CAGAGAAACAGAGGACGCGACTCTAGTTCCTGATGAGTCGCAACAAACAGAAGTTCTTGAGGAGCCAGTTAATGACCCACTCCCCAAAGGTAAAGAAATAGCCTTTGAGG
TAGCTGGTGAAACACGAGCTCCTTCACCATCGAAGCAAACAGAAGACCAACAAAACATTGCGGCGGAAGAAAATGACGATGAAGATTTTTACAAGTTCATCAATGAGGCG
ATTGGGAAGCCAATGATGGATGGACTTGAAGATATCTTCCAAAACCAAGCCGATCTGCATGAACGCGTGATAGATTTCAGACTTGGAGTTAAAAATTGA
Protein sequenceShow/hide protein sequence
MESPTTVPLIHKRKGEEEASGSKKKKKHKAKDLSDPIPLAIESPPKQKKPKSTISSSPPKAIKESSLLPIIQIPSPQTSKTPSPIHQVQIITTPTSLRQEENPQSLVPQA
LDQTTFSPNIIFYAQLNEGIDGFMQELCNTDFDAEDFRETEDATLVPDESQQTEVLEEPVNDPLPKGKEIAFEVAGETRAPSPSKQTEDQQNIAAEENDDEDFYKFINEA
IGKPMMDGLEDIFQNQADLHERVIDFRLGVKN