; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0026269 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026269
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr03:14254244..14255122
RNA-Seq ExpressionPI0026269
SyntenyPI0026269
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041594.1 uncharacterized protein E6C27_scaffold93G00610 [Cucumis melo var. makuwa]3.6e-5545.52Show/hide
Query:  MDLIVNAGLSKIVSNVGPYYPCLIQELIVNLPSDFNNPSSSDFQIVHIRGYVFNLSPSVFNTFLEHHLPPSSPTSFPTPEALASELIGETFIVWPSNGQI
        MDLI  AGL K +SNVGP+YP LI+E IVNLP +FNNPSS+D+Q VHIRG+ F +SP+  N FL + +      S P  E LA+ L G T   WP NG I
Subjt:  MDLIVNAGLSKIVSNVGPYYPCLIQELIVNLPSDFNNPSSSDFQIVHIRGYVFNLSPSVFNTFLEHHLPPSSPTSFPTPEALASELIGETFIVWPSNGQI

Query:  PTVSLSVKYAILHKIGIANWFPSLYALSVSTALTSFLYQIGSGAPIDVG---------------------------FVLIHQNPGIPLASDALGSAPKTL
        P  +LSVKY ILHKIGIANWFPS +A S+S AL +FLYQI +   +D G                            +L+H N  +  ASD     PKT+
Subjt:  PTVSLSVKYAILHKIGIANWFPSLYALSVSTALTSFLYQIGSGAPIDVG---------------------------FVLIHQNPGIPLASDALGSAPKTL

Query:  SLSYRLFQGSHTPDLAPSNQPLQG--YTSTENANIPSEGLLIPHSLASMIFSLLSTKSQVLGNSIVALTKRHSKVDTMLRHLKVLLPSSS
        +LSYRLFQG H PD+ P   P  G     T + +  +EG  +   LA+ I + L+ +S  L NSI  L++R  +VD ++RHLK   PS+S
Subjt:  SLSYRLFQGSHTPDLAPSNQPLQG--YTSTENANIPSEGLLIPHSLASMIFSLLSTKSQVLGNSIVALTKRHSKVDTMLRHLKVLLPSSS

KAA0065846.1 uncharacterized protein E6C27_scaffold37G001590 [Cucumis melo var. makuwa]4.7e-5550.94Show/hide
Query:  MDLIVNAGLSKIVSNVGPYYPCLIQELIVNLPSDFNNPSSSDFQIVHIRGYVFNLSPSVFNTFLEHHLPPSSPTSFPTPEALASELIGETFIVWPSNGQI
        +DLI  AGLSK +SNVG +YP L++E IVNL  +FN+PSS D+Q VHIRG+ F +SP V N FLE+ +     +S P+ + LA  L   T   WP NG I
Subjt:  MDLIVNAGLSKIVSNVGPYYPCLIQELIVNLPSDFNNPSSSDFQIVHIRGYVFNLSPSVFNTFLEHHLPPSSPTSFPTPEALASELIGETFIVWPSNGQI

Query:  PTVSLSVKYAILHKIGIANWFPSLYALSVSTALTSFLYQIGSGAPI--DVGFVLIHQNPGIPLASDALGSAPKTLSLSYRLFQGSHTP----DLAPSNQP
        PTV+LS+KYAILHKIGIANWFPS +A SVS AL +FLYQI +   +  D   +L+H N  +  ASDALG  PKTLSLSY LFQGSH      D+  S  P
Subjt:  PTVSLSVKYAILHKIGIANWFPSLYALSVSTALTSFLYQIGSGAPI--DVGFVLIHQNPGIPLASDALGSAPKTLSLSYRLFQGSHTP----DLAPSNQP

Query:  LQGYTSTENANIPSEGLLIPHSLASMIFSLLSTKSQVLGNSIVALTKRHSKVDTMLRHLKVLLPSSS
            TS  + +I  EG  +   L S I + L+TKS+ L NSI  L +R  +VD+++ HLK   PS+S
Subjt:  LQGYTSTENANIPSEGLLIPHSLASMIFSLLSTKSQVLGNSIVALTKRHSKVDTMLRHLKVLLPSSS

TYK29236.1 uncharacterized protein E5676_scaffold1228G00270 [Cucumis melo var. makuwa]1.0e-5445.73Show/hide
Query:  MDLIVNAGLSKIVSNVGPYYPCLIQELIVNLPSDFNNPSSSDFQIVHIRGYVFNLSPSVFNTFLEHHLPPSSPTSFPTPEALASELIGETFIVWPSNGQI
        M+LI  AGL K +SNVGP+YP LI+E IVNLP +FN+PSS+D+  VHIRG+ F +SP+V N FL + +      S PT + LA+ L G T   W  NG I
Subjt:  MDLIVNAGLSKIVSNVGPYYPCLIQELIVNLPSDFNNPSSSDFQIVHIRGYVFNLSPSVFNTFLEHHLPPSSPTSFPTPEALASELIGETFIVWPSNGQI

Query:  PTVSLSVKYAILHKIGIANWFPSLYALSVSTALTSFLYQIGSGAPIDVG---------------------------FVLIHQNPGIPLASDALGSAPKTL
        PT +LSVKYAILHKIGIANWFPSL+A S+S AL +FLYQI +   +D G                            +L++ N  +  ASDA G  PKT+
Subjt:  PTVSLSVKYAILHKIGIANWFPSLYALSVSTALTSFLYQIGSGAPIDVG---------------------------FVLIHQNPGIPLASDALGSAPKTL

Query:  SLSYRLFQGSHTPDLAPSNQPLQGYTSTENANIP--SEGLLIPHSLASMIFSLLSTKSQVLGNSIVALTKRHSKVDTMLRHLKVLLPSSSSST
        +LSYRLFQGSH PD+     P +G    E  +    +EG  +   LA+ I + L+ +S  L NSI  L++R  +VD ++RHLK    SS+ ST
Subjt:  SLSYRLFQGSHTPDLAPSNQPLQGYTSTENANIP--SEGLLIPHSLASMIFSLLSTKSQVLGNSIVALTKRHSKVDTMLRHLKVLLPSSSSST

XP_008462856.1 PREDICTED: uncharacterized protein LOC103501137 [Cucumis melo]2.5e-5646.21Show/hide
Query:  MDLIVNAGLSKIVSNVGPYYPCLIQELIVNLPSDFNNPSSSDFQIVHIRGYVFNLSPSVFNTFLEHHLPPSSPTSFPTPEALASELIGETFIVWPSNGQI
        M+L   AGL K +SNVGP+YP LI+E IVNLP DFN+PSS ++Q VHIRG+ F +SP+V N FL + +     +S PT E LA+ L G T   WP NG I
Subjt:  MDLIVNAGLSKIVSNVGPYYPCLIQELIVNLPSDFNNPSSSDFQIVHIRGYVFNLSPSVFNTFLEHHLPPSSPTSFPTPEALASELIGETFIVWPSNGQI

Query:  PTVSLSVKYAILHKIGIANWFPSLYALSVSTALTSFLYQIGSGAPIDVG---------------------------FVLIHQNPGIPLASDALGSAPKTL
        P  +LSVKYAILHKIGIANWFPS +A S+S AL +FLYQI +   +D G                            +L+H N  +  ASDA G  PKT+
Subjt:  PTVSLSVKYAILHKIGIANWFPSLYALSVSTALTSFLYQIGSGAPIDVG---------------------------FVLIHQNPGIPLASDALGSAPKTL

Query:  SLSYRLFQGSHTPDLAPSNQPLQG--YTSTENANIPSEGLLIPHSLASMIFSLLSTKSQVLGNSIVALTKRHSKVDTMLRHLKVLLPSSS
        +LSYRLFQGSH PD+     P  G     T + +  +EG  +   LA+ I + L+ +S+ L NSI  L++R  +VD ++RHLK   PS+S
Subjt:  SLSYRLFQGSHTPDLAPSNQPLQG--YTSTENANIPSEGLLIPHSLASMIFSLLSTKSQVLGNSIVALTKRHSKVDTMLRHLKVLLPSSS

XP_008466681.1 PREDICTED: uncharacterized protein LOC103504033 [Cucumis melo]3.6e-5545.52Show/hide
Query:  MDLIVNAGLSKIVSNVGPYYPCLIQELIVNLPSDFNNPSSSDFQIVHIRGYVFNLSPSVFNTFLEHHLPPSSPTSFPTPEALASELIGETFIVWPSNGQI
        MDLI  AGL K +SNVGP+YP LI+E IVNLP +FNNPSS+D+Q VHIRG+ F +SP+  N FL + +      S P  E LA+ L G T   WP NG I
Subjt:  MDLIVNAGLSKIVSNVGPYYPCLIQELIVNLPSDFNNPSSSDFQIVHIRGYVFNLSPSVFNTFLEHHLPPSSPTSFPTPEALASELIGETFIVWPSNGQI

Query:  PTVSLSVKYAILHKIGIANWFPSLYALSVSTALTSFLYQIGSGAPIDVG---------------------------FVLIHQNPGIPLASDALGSAPKTL
        P  +LSVKY ILHKIGIANWFPS +A S+S AL +FLYQI +   +D G                            +L+H N  +  ASD     PKT+
Subjt:  PTVSLSVKYAILHKIGIANWFPSLYALSVSTALTSFLYQIGSGAPIDVG---------------------------FVLIHQNPGIPLASDALGSAPKTL

Query:  SLSYRLFQGSHTPDLAPSNQPLQG--YTSTENANIPSEGLLIPHSLASMIFSLLSTKSQVLGNSIVALTKRHSKVDTMLRHLKVLLPSSS
        +LSYRLFQG H PD+ P   P  G     T + +  +EG  +   LA+ I + L+ +S  L NSI  L++R  +VD ++RHLK   PS+S
Subjt:  SLSYRLFQGSHTPDLAPSNQPLQG--YTSTENANIPSEGLLIPHSLASMIFSLLSTKSQVLGNSIVALTKRHSKVDTMLRHLKVLLPSSS

TrEMBL top hitse value%identityAlignment
A0A1S3CHW3 uncharacterized protein LOC1035011371.2e-5646.21Show/hide
Query:  MDLIVNAGLSKIVSNVGPYYPCLIQELIVNLPSDFNNPSSSDFQIVHIRGYVFNLSPSVFNTFLEHHLPPSSPTSFPTPEALASELIGETFIVWPSNGQI
        M+L   AGL K +SNVGP+YP LI+E IVNLP DFN+PSS ++Q VHIRG+ F +SP+V N FL + +     +S PT E LA+ L G T   WP NG I
Subjt:  MDLIVNAGLSKIVSNVGPYYPCLIQELIVNLPSDFNNPSSSDFQIVHIRGYVFNLSPSVFNTFLEHHLPPSSPTSFPTPEALASELIGETFIVWPSNGQI

Query:  PTVSLSVKYAILHKIGIANWFPSLYALSVSTALTSFLYQIGSGAPIDVG---------------------------FVLIHQNPGIPLASDALGSAPKTL
        P  +LSVKYAILHKIGIANWFPS +A S+S AL +FLYQI +   +D G                            +L+H N  +  ASDA G  PKT+
Subjt:  PTVSLSVKYAILHKIGIANWFPSLYALSVSTALTSFLYQIGSGAPIDVG---------------------------FVLIHQNPGIPLASDALGSAPKTL

Query:  SLSYRLFQGSHTPDLAPSNQPLQG--YTSTENANIPSEGLLIPHSLASMIFSLLSTKSQVLGNSIVALTKRHSKVDTMLRHLKVLLPSSS
        +LSYRLFQGSH PD+     P  G     T + +  +EG  +   LA+ I + L+ +S+ L NSI  L++R  +VD ++RHLK   PS+S
Subjt:  SLSYRLFQGSHTPDLAPSNQPLQG--YTSTENANIPSEGLLIPHSLASMIFSLLSTKSQVLGNSIVALTKRHSKVDTMLRHLKVLLPSSS

A0A1S3CRT1 uncharacterized protein LOC1035040331.7e-5545.52Show/hide
Query:  MDLIVNAGLSKIVSNVGPYYPCLIQELIVNLPSDFNNPSSSDFQIVHIRGYVFNLSPSVFNTFLEHHLPPSSPTSFPTPEALASELIGETFIVWPSNGQI
        MDLI  AGL K +SNVGP+YP LI+E IVNLP +FNNPSS+D+Q VHIRG+ F +SP+  N FL + +      S P  E LA+ L G T   WP NG I
Subjt:  MDLIVNAGLSKIVSNVGPYYPCLIQELIVNLPSDFNNPSSSDFQIVHIRGYVFNLSPSVFNTFLEHHLPPSSPTSFPTPEALASELIGETFIVWPSNGQI

Query:  PTVSLSVKYAILHKIGIANWFPSLYALSVSTALTSFLYQIGSGAPIDVG---------------------------FVLIHQNPGIPLASDALGSAPKTL
        P  +LSVKY ILHKIGIANWFPS +A S+S AL +FLYQI +   +D G                            +L+H N  +  ASD     PKT+
Subjt:  PTVSLSVKYAILHKIGIANWFPSLYALSVSTALTSFLYQIGSGAPIDVG---------------------------FVLIHQNPGIPLASDALGSAPKTL

Query:  SLSYRLFQGSHTPDLAPSNQPLQG--YTSTENANIPSEGLLIPHSLASMIFSLLSTKSQVLGNSIVALTKRHSKVDTMLRHLKVLLPSSS
        +LSYRLFQG H PD+ P   P  G     T + +  +EG  +   LA+ I + L+ +S  L NSI  L++R  +VD ++RHLK   PS+S
Subjt:  SLSYRLFQGSHTPDLAPSNQPLQG--YTSTENANIPSEGLLIPHSLASMIFSLLSTKSQVLGNSIVALTKRHSKVDTMLRHLKVLLPSSS

A0A5A7TDT9 Uncharacterized protein1.7e-5545.52Show/hide
Query:  MDLIVNAGLSKIVSNVGPYYPCLIQELIVNLPSDFNNPSSSDFQIVHIRGYVFNLSPSVFNTFLEHHLPPSSPTSFPTPEALASELIGETFIVWPSNGQI
        MDLI  AGL K +SNVGP+YP LI+E IVNLP +FNNPSS+D+Q VHIRG+ F +SP+  N FL + +      S P  E LA+ L G T   WP NG I
Subjt:  MDLIVNAGLSKIVSNVGPYYPCLIQELIVNLPSDFNNPSSSDFQIVHIRGYVFNLSPSVFNTFLEHHLPPSSPTSFPTPEALASELIGETFIVWPSNGQI

Query:  PTVSLSVKYAILHKIGIANWFPSLYALSVSTALTSFLYQIGSGAPIDVG---------------------------FVLIHQNPGIPLASDALGSAPKTL
        P  +LSVKY ILHKIGIANWFPS +A S+S AL +FLYQI +   +D G                            +L+H N  +  ASD     PKT+
Subjt:  PTVSLSVKYAILHKIGIANWFPSLYALSVSTALTSFLYQIGSGAPIDVG---------------------------FVLIHQNPGIPLASDALGSAPKTL

Query:  SLSYRLFQGSHTPDLAPSNQPLQG--YTSTENANIPSEGLLIPHSLASMIFSLLSTKSQVLGNSIVALTKRHSKVDTMLRHLKVLLPSSS
        +LSYRLFQG H PD+ P   P  G     T + +  +EG  +   LA+ I + L+ +S  L NSI  L++R  +VD ++RHLK   PS+S
Subjt:  SLSYRLFQGSHTPDLAPSNQPLQG--YTSTENANIPSEGLLIPHSLASMIFSLLSTKSQVLGNSIVALTKRHSKVDTMLRHLKVLLPSSS

A0A5A7VHL4 Uncharacterized protein2.3e-5550.94Show/hide
Query:  MDLIVNAGLSKIVSNVGPYYPCLIQELIVNLPSDFNNPSSSDFQIVHIRGYVFNLSPSVFNTFLEHHLPPSSPTSFPTPEALASELIGETFIVWPSNGQI
        +DLI  AGLSK +SNVG +YP L++E IVNL  +FN+PSS D+Q VHIRG+ F +SP V N FLE+ +     +S P+ + LA  L   T   WP NG I
Subjt:  MDLIVNAGLSKIVSNVGPYYPCLIQELIVNLPSDFNNPSSSDFQIVHIRGYVFNLSPSVFNTFLEHHLPPSSPTSFPTPEALASELIGETFIVWPSNGQI

Query:  PTVSLSVKYAILHKIGIANWFPSLYALSVSTALTSFLYQIGSGAPI--DVGFVLIHQNPGIPLASDALGSAPKTLSLSYRLFQGSHTP----DLAPSNQP
        PTV+LS+KYAILHKIGIANWFPS +A SVS AL +FLYQI +   +  D   +L+H N  +  ASDALG  PKTLSLSY LFQGSH      D+  S  P
Subjt:  PTVSLSVKYAILHKIGIANWFPSLYALSVSTALTSFLYQIGSGAPI--DVGFVLIHQNPGIPLASDALGSAPKTLSLSYRLFQGSHTP----DLAPSNQP

Query:  LQGYTSTENANIPSEGLLIPHSLASMIFSLLSTKSQVLGNSIVALTKRHSKVDTMLRHLKVLLPSSS
            TS  + +I  EG  +   L S I + L+TKS+ L NSI  L +R  +VD+++ HLK   PS+S
Subjt:  LQGYTSTENANIPSEGLLIPHSLASMIFSLLSTKSQVLGNSIVALTKRHSKVDTMLRHLKVLLPSSS

A0A5D3E001 Uncharacterized protein5.0e-5545.73Show/hide
Query:  MDLIVNAGLSKIVSNVGPYYPCLIQELIVNLPSDFNNPSSSDFQIVHIRGYVFNLSPSVFNTFLEHHLPPSSPTSFPTPEALASELIGETFIVWPSNGQI
        M+LI  AGL K +SNVGP+YP LI+E IVNLP +FN+PSS+D+  VHIRG+ F +SP+V N FL + +      S PT + LA+ L G T   W  NG I
Subjt:  MDLIVNAGLSKIVSNVGPYYPCLIQELIVNLPSDFNNPSSSDFQIVHIRGYVFNLSPSVFNTFLEHHLPPSSPTSFPTPEALASELIGETFIVWPSNGQI

Query:  PTVSLSVKYAILHKIGIANWFPSLYALSVSTALTSFLYQIGSGAPIDVG---------------------------FVLIHQNPGIPLASDALGSAPKTL
        PT +LSVKYAILHKIGIANWFPSL+A S+S AL +FLYQI +   +D G                            +L++ N  +  ASDA G  PKT+
Subjt:  PTVSLSVKYAILHKIGIANWFPSLYALSVSTALTSFLYQIGSGAPIDVG---------------------------FVLIHQNPGIPLASDALGSAPKTL

Query:  SLSYRLFQGSHTPDLAPSNQPLQGYTSTENANIP--SEGLLIPHSLASMIFSLLSTKSQVLGNSIVALTKRHSKVDTMLRHLKVLLPSSSSST
        +LSYRLFQGSH PD+     P +G    E  +    +EG  +   LA+ I + L+ +S  L NSI  L++R  +VD ++RHLK    SS+ ST
Subjt:  SLSYRLFQGSHTPDLAPSNQPLQGYTSTENANIP--SEGLLIPHSLASMIFSLLSTKSQVLGNSIVALTKRHSKVDTMLRHLKVLLPSSSSST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTTAATTGTCAATGCTGGTCTGTCTAAAATAGTGTCCAATGTTGGTCCTTATTATCCTTGTCTTATTCAAGAACTGATTGTTAACCTTCCCTCAGATTTTAACAA
TCCAAGTAGCTCTGATTTTCAAATTGTTCATATTAGAGGATATGTTTTTAATCTCTCACCATCTGTCTTTAATACTTTCCTTGAACATCATCTGCCTCCATCTTCTCCTA
CTTCATTTCCTACTCCAGAAGCTTTAGCTTCTGAATTAATTGGTGAAACATTTATTGTCTGGCCCTCAAATGGTCAAATTCCAACAGTCTCCCTTAGTGTCAAGTATGCA
ATTTTACACAAAATTGGCATTGCAAATTGGTTTCCCTCCTTATATGCCTTAAGTGTCTCTACTGCCCTCACCTCATTTCTATACCAAATTGGCAGTGGTGCCCCTATAGA
TGTTGGCTTTGTGCTCATTCATCAAAATCCTGGGATTCCTTTAGCTTCTGATGCTCTAGGGTCTGCTCCAAAAACCTTGTCTCTTAGTTACAGACTTTTCCAAGGCTCTC
ACACACCGGATCTTGCCCCTTCTAACCAACCCTTGCAAGGTTATACTTCTACTGAAAATGCCAATATTCCATCTGAGGGTCTTCTTATTCCTCACTCCTTGGCATCTATG
ATTTTTAGCCTTTTGTCTACTAAGTCTCAGGTTTTGGGTAATTCTATTGTTGCTTTAACTAAGAGGCATTCAAAAGTTGATACCATGCTTCGCCATTTAAAGGTCCTTCT
TCCATCTTCAAGCTCCTCGACAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACTTAATTGTCAATGCTGGTCTGTCTAAAATAGTGTCCAATGTTGGTCCTTATTATCCTTGTCTTATTCAAGAACTGATTGTTAACCTTCCCTCAGATTTTAACAA
TCCAAGTAGCTCTGATTTTCAAATTGTTCATATTAGAGGATATGTTTTTAATCTCTCACCATCTGTCTTTAATACTTTCCTTGAACATCATCTGCCTCCATCTTCTCCTA
CTTCATTTCCTACTCCAGAAGCTTTAGCTTCTGAATTAATTGGTGAAACATTTATTGTCTGGCCCTCAAATGGTCAAATTCCAACAGTCTCCCTTAGTGTCAAGTATGCA
ATTTTACACAAAATTGGCATTGCAAATTGGTTTCCCTCCTTATATGCCTTAAGTGTCTCTACTGCCCTCACCTCATTTCTATACCAAATTGGCAGTGGTGCCCCTATAGA
TGTTGGCTTTGTGCTCATTCATCAAAATCCTGGGATTCCTTTAGCTTCTGATGCTCTAGGGTCTGCTCCAAAAACCTTGTCTCTTAGTTACAGACTTTTCCAAGGCTCTC
ACACACCGGATCTTGCCCCTTCTAACCAACCCTTGCAAGGTTATACTTCTACTGAAAATGCCAATATTCCATCTGAGGGTCTTCTTATTCCTCACTCCTTGGCATCTATG
ATTTTTAGCCTTTTGTCTACTAAGTCTCAGGTTTTGGGTAATTCTATTGTTGCTTTAACTAAGAGGCATTCAAAAGTTGATACCATGCTTCGCCATTTAAAGGTCCTTCT
TCCATCTTCAAGCTCCTCGACAATTTGA
Protein sequenceShow/hide protein sequence
MDLIVNAGLSKIVSNVGPYYPCLIQELIVNLPSDFNNPSSSDFQIVHIRGYVFNLSPSVFNTFLEHHLPPSSPTSFPTPEALASELIGETFIVWPSNGQIPTVSLSVKYA
ILHKIGIANWFPSLYALSVSTALTSFLYQIGSGAPIDVGFVLIHQNPGIPLASDALGSAPKTLSLSYRLFQGSHTPDLAPSNQPLQGYTSTENANIPSEGLLIPHSLASM
IFSLLSTKSQVLGNSIVALTKRHSKVDTMLRHLKVLLPSSSSSTI