; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0026283 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026283
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr03:20770913..20771708
RNA-Seq ExpressionPI0026283
SyntenyPI0026283
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ERM93404.1 hypothetical protein AMTR_s04947p00003620 [Amborella trichopoda]3.0e-4041.33Show/hide
Query:  AVQEKNAAYMVHDLDRPIRSYAAPNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNARQFGSHPREDPYEHIRSFYSICASFHMPGISPEELRFALFPLT
        A Q  N   +  D  R IR YAAP F   NPGI  P   +  +FE+KPVM QM+Q   QF   P EDP+ H+RSF  +  SF + G+S E LR  LFP +
Subjt:  AVQEKNAAYMVHDLDRPIRSYAAPNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNARQFGSHPREDPYEHIRSFYSICASFHMPGISPEELRFALFPLT

Query:  LRDEAKRWST-----------------------PWKMARRRKELMSFQQKNEENLHDAWSSFKRLVKACPHNGIPECILMKVFYFGLNKATQQTADDVFV
        LRD A+ W                         P + A+ R E+MSFQQ  +E+  DAW  FK L++ CPH+GIP CI M+ FY GLN A++   D    
Subjt:  LRDEAKRWST-----------------------PWKMARRRKELMSFQQKNEENLHDAWSSFKRLVKACPHNGIPECILMKVFYFGLNKATQQTADDVFV

Query:  GGMLKSLYNQIKATLDTMANNNEEW
        G +L   YN+    L+T+A+NN +W
Subjt:  GGMLKSLYNQIKATLDTMANNNEEW

WP_217833177.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]4.1e-5044.4Show/hide
Query:  NRNAPPPQAVQEKNAAYMVHDLDRPIRSYAAPNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNARQFGSHPREDPYEHIRSFYSICASFHMPGISPEEL
        N NA    A  + N   + HD +RP+R YA+PN YNF PGI  P F  N RFE+KPVMLQM+Q A QFG    EDP+ H++SF  IC++F M G+  + +
Subjt:  NRNAPPPQAVQEKNAAYMVHDLDRPIRSYAAPNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNARQFGSHPREDPYEHIRSFYSICASFHMPGISPEEL

Query:  RFALFPLTLRDEAKRWS--------TPW-KM--------------ARRRKELMSFQQKNEENLHDAWSSFKRLVKACPHNGIPECILMKVFYFGLNKATQ
        R  LFP +LRDEA++W+        T W KM              A+RR+++++F+QK+ E   +AW+ FKRLV+ CPHNGIP C+ M++FY GLNK +Q
Subjt:  RFALFPLTLRDEAKRWS--------TPW-KM--------------ARRRKELMSFQQKNEENLHDAWSSFKRLVKACPHNGIPECILMKVFYFGLNKATQ

Query:  QTADDVFVGGMLKSLYNQIKATLDTMANNNEE
          AD    GG++   Y Q K  LD ++ N  +
Subjt:  QTADDVFVGGMLKSLYNQIKATLDTMANNNEE

XP_030497803.1 uncharacterized protein LOC115713460 [Cannabis sativa]7.8e-4141.33Show/hide
Query:  AVQEKNAAYMVHDLDRPIRSYAAPNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNARQFGSHPREDPYEHIRSFYSICASFHMPGISPEELRFALFPLT
        A  E N   +  D  R IR YAAP F   NPGI  P   +   FE+KPVM QM+Q   QFG  P EDP+ HIRSF  +  SF + G+S E LR  LFP +
Subjt:  AVQEKNAAYMVHDLDRPIRSYAAPNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNARQFGSHPREDPYEHIRSFYSICASFHMPGISPEELRFALFPLT

Query:  LRDEAKRWST-----------------------PWKMARRRKELMSFQQKNEENLHDAWSSFKRLVKACPHNGIPECILMKVFYFGLNKATQQTADDVFV
        LRD A+ W                         P + A+ R E+MSFQQ  +E   DAW  FK L++ CPH+GIP CI ++ FY GLN A++   D    
Subjt:  LRDEAKRWST-----------------------PWKMARRRKELMSFQQKNEENLHDAWSSFKRLVKACPHNGIPECILMKVFYFGLNKATQQTADDVFV

Query:  GGMLKSLYNQIKATLDTMANNNEEW
        G +L   YN+    L+ +A+NN +W
Subjt:  GGMLKSLYNQIKATLDTMANNNEEW

XP_030508936.1 uncharacterized protein LOC115723589 [Cannabis sativa]2.3e-4041.44Show/hide
Query:  EKNAAYMVHDLDRPIRSYAAPNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNARQFGSHPREDPYEHIRSFYSICASFHMPGISPEELRFALFPLTLRD
        E N   +  D  R IR YAAP F   NPGI  P   +   FE+KPVM QM+Q   QFG  P EDP+ HIRSF  +  SF + G+S E LR  LFP +LRD
Subjt:  EKNAAYMVHDLDRPIRSYAAPNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNARQFGSHPREDPYEHIRSFYSICASFHMPGISPEELRFALFPLTLRD

Query:  EAKRWST-----------------------PWKMARRRKELMSFQQKNEENLHDAWSSFKRLVKACPHNGIPECILMKVFYFGLNKATQQTADDVFVGGM
         A+ W                         P + A+ R E+MSFQQ  +E   DAW  FK L++ CPH+GIP CI ++ FY GLN A +   D    G +
Subjt:  EAKRWST-----------------------PWKMARRRKELMSFQQKNEENLHDAWSSFKRLVKACPHNGIPECILMKVFYFGLNKATQQTADDVFVGGM

Query:  LKSLYNQIKATLDTMANNNEEW
        L   YN+    L+ +A+NN +W
Subjt:  LKSLYNQIKATLDTMANNNEEW

XP_038887458.1 uncharacterized protein LOC120077591 [Benincasa hispida]1.9e-4742.19Show/hide
Query:  MKNNNNRNAPP-PQAVQE--KNAAYMVHDLDRPIRSYAAPNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNARQFGSHPREDPYEHIRSFYSICASFHM
        M +NNN  AP   Q V    ++  ++  D + PIR+YAAPN Y+F+PGI+ P+  ENARFEIKPVM+QMIQN RQF S   E+P+ H+  F  +C++F +
Subjt:  MKNNNNRNAPP-PQAVQE--KNAAYMVHDLDRPIRSYAAPNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNARQFGSHPREDPYEHIRSFYSICASFHM

Query:  PGISPEELRFALFPLTLRDEAKRWS--------------TPWKM---------ARRRKELMSFQQKNEENLHDAWSSFKRLVKACPHNGIPECILMKVFY
        PGI+P  +R  LFP TLRD+AKRW+                W M          RRRK +++F++ + E L  AW  F+RLVK CPH GI +C+LM++FY
Subjt:  PGISPEELRFALFPLTLRDEAKRWS--------------TPWKM---------ARRRKELMSFQQKNEENLHDAWSSFKRLVKACPHNGIPECILMKVFY

Query:  FGLNKATQQTADDVFVGGMLKSLYNQIKATLDTMANNNEEWDEDDFDNHRGGRIRS
         GLN++TQ  AD   V   +   Y + K  LD ++ N ++W +D +      R R+
Subjt:  FGLNKATQQTADDVFVGGMLKSLYNQIKATLDTMANNNEEWDEDDFDNHRGGRIRS

TrEMBL top hitse value%identityAlignment
A0A5A7V1F3 Retrotrans_gag domain-containing protein1.6e-3643.52Show/hide
Query:  YMVHDLDRPIRSYAAPNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNARQFGSHPREDPYEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEAKRW
        Y+ H+L RPIRSYA P+ Y FNPGIAYP FGENA +E K        +A+++ +                         S E      +   +    K++
Subjt:  YMVHDLDRPIRSYAAPNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNARQFGSHPREDPYEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEAKRW

Query:  STPWKMARRRKELMSFQQKNEENLHDAWSSFKRLVKACPHNGIPECILMKVFYFGLNKATQQTADDVFVGGMLKSLYNQIKATLDTMANNNEE
            K+A+RR++L+ F+Q++ +NLHDAWS FKR+VKAC H+GI + +LM+ FYFGL+K T+Q+AD +F+GG+L+S YNQIKA LD+MANN+++
Subjt:  STPWKMARRRKELMSFQQKNEENLHDAWSSFKRLVKACPHNGIPECILMKVFYFGLNKATQQTADDVFVGGMLKSLYNQIKATLDTMANNNEE

A0A5A7V2U7 Putative disease resistance RPP13-like protein 11.1e-3567.86Show/hide
Query:  MKNNNNRNAPPPQAVQEKNAAYMVHDLDRPIRSYAAPNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNARQFGSHPREDPYEHIRSFYSICASFHMPGI
        M N NN+  P  QA Q  N  Y+  D DRPIRSYA+PN Y+FNPGIAYP F EN RFEIK VMLQ+IQNA QF  HPR+DP+++IR+FYSICASFHMPGI
Subjt:  MKNNNNRNAPPPQAVQEKNAAYMVHDLDRPIRSYAAPNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNARQFGSHPREDPYEHIRSFYSICASFHMPGI

Query:  SPEELRFALFPL
        S EELRF  F L
Subjt:  SPEELRFALFPL

A0A6J1EEI2 uncharacterized protein LOC1114333949.0e-3536.55Show/hide
Query:  NNNRNAPPPQAVQEK---NAAYMVHDLDRPIRSYAAPNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNARQFGSHPREDPYEHIRSFYSICASFHMPGI
        N     P   A QE+   NA ++  D +R IR+YA P     NP I  P   +   FE+KPVM QM+Q   QF   P EDP+ H++SF  +  SF    +
Subjt:  NNNRNAPPPQAVQEK---NAAYMVHDLDRPIRSYAAPNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNARQFGSHPREDPYEHIRSFYSICASFHMPGI

Query:  SPEELRFALFPLTLRDEAKRWST-----------------------PWKMARRRKELMSFQQKNEENLHDAWSSFKRLVKACPHNGIPECILMKVFYFGL
          + +R +LFP +LRD AK W                         P + AR R E++ FQQ  ++ L +AW  FK +++ CPH+G+P CI M+ FY GL
Subjt:  SPEELRFALFPLTLRDEAKRWST-----------------------PWKMARRRKELMSFQQKNEENLHDAWSSFKRLVKACPHNGIPECILMKVFYFGL

Query:  NKATQQTADDVFVGGMLKSLYNQIKATLDTMANNNEEW
        N AT+Q  D    G +L   YN+    L+ +A+NN +W
Subjt:  NKATQQTADDVFVGGMLKSLYNQIKATLDTMANNNEEW

A0A6J1H7E4 uncharacterized protein LOC1114611682.8e-3637.82Show/hide
Query:  NNNRNAPPPQAVQEK---NAAYMVHDLDRPIRSYAAPNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNARQFGSHPREDPYEHIRSFYSICASFHMPGI
        N     P   A QE+   NA  +  D +R IR+YA P     NP I  P   +   FE+KPVM QM+Q   QF   P EDP+ H++SF  +  SF   G+
Subjt:  NNNRNAPPPQAVQEK---NAAYMVHDLDRPIRSYAAPNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNARQFGSHPREDPYEHIRSFYSICASFHMPGI

Query:  SPEELRFALFPLTLRDEAKRWST-----------------------PWKMARRRKELMSFQQKNEENLHDAWSSFKRLVKACPHNGIPECILMKVFYFGL
          + +R +LFP +LRD AK W                         P + AR R E+++FQQ  +E L +AW  FK +++ CPH+G+P CI M+ FY GL
Subjt:  SPEELRFALFPLTLRDEAKRWST-----------------------PWKMARRRKELMSFQQKNEENLHDAWSSFKRLVKACPHNGIPECILMKVFYFGL

Query:  NKATQQTADDVFVGGMLKSLYNQIKATLDTMANNNEEW
        N AT+Q  D    G ML   YN+    L+ +A+NN +W
Subjt:  NKATQQTADDVFVGGMLKSLYNQIKATLDTMANNNEEW

U5CUI2 Retrotrans_gag domain-containing protein1.4e-4041.33Show/hide
Query:  AVQEKNAAYMVHDLDRPIRSYAAPNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNARQFGSHPREDPYEHIRSFYSICASFHMPGISPEELRFALFPLT
        A Q  N   +  D  R IR YAAP F   NPGI  P   +  +FE+KPVM QM+Q   QF   P EDP+ H+RSF  +  SF + G+S E LR  LFP +
Subjt:  AVQEKNAAYMVHDLDRPIRSYAAPNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNARQFGSHPREDPYEHIRSFYSICASFHMPGISPEELRFALFPLT

Query:  LRDEAKRWST-----------------------PWKMARRRKELMSFQQKNEENLHDAWSSFKRLVKACPHNGIPECILMKVFYFGLNKATQQTADDVFV
        LRD A+ W                         P + A+ R E+MSFQQ  +E+  DAW  FK L++ CPH+GIP CI M+ FY GLN A++   D    
Subjt:  LRDEAKRWST-----------------------PWKMARRRKELMSFQQKNEENLHDAWSSFKRLVKACPHNGIPECILMKVFYFGLNKATQQTADDVFV

Query:  GGMLKSLYNQIKATLDTMANNNEEW
        G +L   YN+    L+T+A+NN +W
Subjt:  GGMLKSLYNQIKATLDTMANNNEEW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAATAATAACAATAGGAATGCACCTCCGCCTCAAGCTGTCCAAGAAAAAAACGCCGCCTACATGGTGCATGACTTGGATAGGCCAATTAGGTCATATGCTGCACC
CAACTTCTACAATTTCAACCCAGGGATCGCCTACCCTGTGTTTGGCGAGAACGCTAGATTTGAAATCAAACCTGTAATGCTACAGATGATTCAGAACGCCAGACAGTTTG
GCAGTCATCCTAGGGAAGATCCATATGAGCACATAAGAAGTTTCTACTCTATCTGTGCATCCTTCCATATGCCAGGCATCTCACCCGAAGAATTAAGATTCGCGCTTTTC
CCGTTAACTTTGAGGGACGAGGCAAAAAGGTGGTCAACACCTTGGAAGATGGCGAGAAGAAGGAAGGAGCTCATGAGCTTTCAACAGAAGAATGAAGAGAACCTACATGA
CGCGTGGAGTAGCTTCAAGAGGTTGGTCAAAGCATGCCCCCATAATGGCATTCCTGAATGCATATTGATGAAGGTATTCTATTTTGGCTTGAACAAGGCAACACAGCAGA
CTGCTGATGATGTGTTTGTAGGTGGTATGTTGAAGAGCTTATACAACCAGATTAAGGCAACACTGGACACGATGGCCAACAATAACGAAGAATGGGATGAAGATGATTTC
GACAATCACCGAGGAGGACGCATACGAAGCAAAGAAGGAATGGACAAGAACACCGTGGTGGCGTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAATAATAACAATAGGAATGCACCTCCGCCTCAAGCTGTCCAAGAAAAAAACGCCGCCTACATGGTGCATGACTTGGATAGGCCAATTAGGTCATATGCTGCACC
CAACTTCTACAATTTCAACCCAGGGATCGCCTACCCTGTGTTTGGCGAGAACGCTAGATTTGAAATCAAACCTGTAATGCTACAGATGATTCAGAACGCCAGACAGTTTG
GCAGTCATCCTAGGGAAGATCCATATGAGCACATAAGAAGTTTCTACTCTATCTGTGCATCCTTCCATATGCCAGGCATCTCACCCGAAGAATTAAGATTCGCGCTTTTC
CCGTTAACTTTGAGGGACGAGGCAAAAAGGTGGTCAACACCTTGGAAGATGGCGAGAAGAAGGAAGGAGCTCATGAGCTTTCAACAGAAGAATGAAGAGAACCTACATGA
CGCGTGGAGTAGCTTCAAGAGGTTGGTCAAAGCATGCCCCCATAATGGCATTCCTGAATGCATATTGATGAAGGTATTCTATTTTGGCTTGAACAAGGCAACACAGCAGA
CTGCTGATGATGTGTTTGTAGGTGGTATGTTGAAGAGCTTATACAACCAGATTAAGGCAACACTGGACACGATGGCCAACAATAACGAAGAATGGGATGAAGATGATTTC
GACAATCACCGAGGAGGACGCATACGAAGCAAAGAAGGAATGGACAAGAACACCGTGGTGGCGTTGTAA
Protein sequenceShow/hide protein sequence
MKNNNNRNAPPPQAVQEKNAAYMVHDLDRPIRSYAAPNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNARQFGSHPREDPYEHIRSFYSICASFHMPGISPEELRFALF
PLTLRDEAKRWSTPWKMARRRKELMSFQQKNEENLHDAWSSFKRLVKACPHNGIPECILMKVFYFGLNKATQQTADDVFVGGMLKSLYNQIKATLDTMANNNEEWDEDDF
DNHRGGRIRSKEGMDKNTVVAL