; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0026305 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026305
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr12:10086110..10086961
RNA-Seq ExpressionPI0026305
SyntenyPI0026305
Gene Ontology termsNA
InterPro domainsIPR024752 - Myb/SANT-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33917.1 hypothetical protein [Cucumis melo subsp. melo]2.3e-5660.94Show/hide
Query:  MTTSSKAPKHHWTKKEDVVLVECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPRHNITATTIDCRIKTMKKAFQAISEMRGPSCSGFGWNDELKCI
        M +SS+  KH W K++D  LVECLV+LV+S GW SDNGTF  GY+S L +M+A++M   NI ATTID  IKTM+K F AISE+RGPSCSGF WNDEL  I
Subjt:  MTTSSKAPKHHWTKKEDVVLVECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPRHNITATTIDCRIKTMKKAFQAISEMRGPSCSGFGWNDELKCI

Query:  IAEKDLYDSWVKSGLDMSPDDIMGTRSGRLSEARAGSSGSKRKRGQQALEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQ
        I EKD++D+W+K GL+MSPD+ M +R GR  + R  SS SKRKR  + +E A II++AMEYANDQL  I +WP  + QDASVT+ EVVRQLQ
Subjt:  IAEKDLYDSWVKSGLDMSPDDIMGTRSGRLSEARAGSSGSKRKRGQQALEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQ

KAA0035621.1 retrotransposon protein [Cucumis melo var. makuwa]2.0e-5547.06Show/hide
Query:  MTTSSKAPKHHWTKKEDVVLVECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPRHNITATTIDCRIKTMKKAFQAISEMRGPSCSGFGWNDELKCI
        MT+SS+ PKH WTK+E+  LVECLVELV++GGWRSDNGTFRPGY + L +M+A ++P  NI A+TID RIK MK+ F A++EMRGP+CSGFGWNDE KCI
Subjt:  MTTSSKAPKHHWTKKEDVVLVECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPRHNITATTIDCRIKTMKKAFQAISEMRGPSCSGFGWNDELKCI

Query:  IAEKDLYDSW---------------------------------------------------------------VKSGLDMSPDDIMGTRSGRLSEARAGS
        +AEK+++D W                                                                  GL+MSPDD+M TR+ R+SE R  S
Subjt:  IAEKDLYDSW---------------------------------------------------------------VKSGLDMSPDDIMGTRSGRLSEARAGS

Query:  SGSKRKRGQQALEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQ
        SGSKRKR   A ++ +I+R+A+EY N+QL  IAEWP  QRQDA+ TR E+VR L+
Subjt:  SGSKRKRGQQALEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQ

KAA0048377.1 retrotransposon protein [Cucumis melo var. makuwa]2.0e-5547.06Show/hide
Query:  MTTSSKAPKHHWTKKEDVVLVECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPRHNITATTIDCRIKTMKKAFQAISEMRGPSCSGFGWNDELKCI
        MT+SS+ PKH WTK+E+  LVECLVELV++GGWRSDNGTFRPGY + L +M+A ++P  NI A+TID RIK MK+ F A++EMRGP+CSGFGWNDE KCI
Subjt:  MTTSSKAPKHHWTKKEDVVLVECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPRHNITATTIDCRIKTMKKAFQAISEMRGPSCSGFGWNDELKCI

Query:  IAEKDLYDSW---------------------------------------------------------------VKSGLDMSPDDIMGTRSGRLSEARAGS
        +AEK+++D W                                                                  GL+MSPDD+M TR+ R+SE R  S
Subjt:  IAEKDLYDSW---------------------------------------------------------------VKSGLDMSPDDIMGTRSGRLSEARAGS

Query:  SGSKRKRGQQALEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQ
        SGSKRKR   A ++ +I+R+A+EY N+QL  IAEWP  QRQDA+ TR E+VR L+
Subjt:  SGSKRKRGQQALEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQ

TYK05082.1 retrotransposon protein [Cucumis melo var. makuwa]6.2e-5748.25Show/hide
Query:  MTTSSKAPKHHWTKKEDVVLVECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPRHNITATTIDCRIKTMKKAFQAISEMRGPSCSGFGWNDELKCI
        M +SS+ PKH WTK+E+  LVECLVELV++GGWRSDNGTFRPGY + L +M+A ++P  NI A+TID RIK MK+ F A++EMRGP+CSGFGWNDE KCI
Subjt:  MTTSSKAPKHHWTKKEDVVLVECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPRHNITATTIDCRIKTMKKAFQAISEMRGPSCSGFGWNDELKCI

Query:  IAEKDLYDSWVKS-----------------------------------------------------------------GLDMSPDDIMGTRSGRLSEARA
        + EK+L+D WVKS                                                                 GL+MSPDD+M TR+ R+SE R 
Subjt:  IAEKDLYDSWVKS-----------------------------------------------------------------GLDMSPDDIMGTRSGRLSEARA

Query:  GSSGSKRKRGQQALEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQ
         SSGSKRKR   A ++ +I+R+A+EY N+QL  IAEWP  QRQDAS TR E+VRQL+
Subjt:  GSSGSKRKRGQQALEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQ

XP_008441954.1 PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]1.2e-5546.72Show/hide
Query:  MTTSSKAPKHHWTKKEDVVLVECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPRHNI-TATTIDCRIKTMKKAFQAISEMRGPSCSGFGWNDELKC
        M + S+APKH WTK+E+   VECLVELVSSGGWRSDNGTF+PGY + LQ+M+AE++P  NI  ++TIDC +K++KK + AI+EMRGPSCSGFGWN+E +C
Subjt:  MTTSSKAPKHHWTKKEDVVLVECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPRHNI-TATTIDCRIKTMKKAFQAISEMRGPSCSGFGWNDELKC

Query:  IIAEKDLYDSWVKS------------------------------------------------------------------GLDMSPDDIMGTRSGRLSEA
        IIAE+DL+DSW+KS                                                                  G+ MSPD++ G R+G+ SE 
Subjt:  IIAEKDLYDSWVKS------------------------------------------------------------------GLDMSPDDIMGTRSGRLSEA

Query:  RAGSSGSKRKRGQQALEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQ
        R  SS SKRKRG +  E  E+IRS ME+ N+QLKAIA+WPKE+R      RA+VV+QLQ
Subjt:  RAGSSGSKRKRGQQALEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQ

TrEMBL top hitse value%identityAlignment
A0A1S3B4L3 uncharacterized protein LOC1034859535.6e-5646.72Show/hide
Query:  MTTSSKAPKHHWTKKEDVVLVECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPRHNI-TATTIDCRIKTMKKAFQAISEMRGPSCSGFGWNDELKC
        M + S+APKH WTK+E+   VECLVELVSSGGWRSDNGTF+PGY + LQ+M+AE++P  NI  ++TIDC +K++KK + AI+EMRGPSCSGFGWN+E +C
Subjt:  MTTSSKAPKHHWTKKEDVVLVECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPRHNI-TATTIDCRIKTMKKAFQAISEMRGPSCSGFGWNDELKC

Query:  IIAEKDLYDSWVKS------------------------------------------------------------------GLDMSPDDIMGTRSGRLSEA
        IIAE+DL+DSW+KS                                                                  G+ MSPD++ G R+G+ SE 
Subjt:  IIAEKDLYDSWVKS------------------------------------------------------------------GLDMSPDDIMGTRSGRLSEA

Query:  RAGSSGSKRKRGQQALEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQ
        R  SS SKRKRG +  E  E+IRS ME+ N+QLKAIA+WPKE+R      RA+VV+QLQ
Subjt:  RAGSSGSKRKRGQQALEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQ

A0A5A7U0H7 Retrotransposon protein5.6e-5646.72Show/hide
Query:  MTTSSKAPKHHWTKKEDVVLVECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPRHNI-TATTIDCRIKTMKKAFQAISEMRGPSCSGFGWNDELKC
        M + S+APKH WTK+E+   VECLVELVSSGGWRSDNGTF+PGY + LQ+M+AE++P  NI  ++TIDC +K++KK + AI+EMRGPSCSGFGWN+E +C
Subjt:  MTTSSKAPKHHWTKKEDVVLVECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPRHNI-TATTIDCRIKTMKKAFQAISEMRGPSCSGFGWNDELKC

Query:  IIAEKDLYDSWVKS------------------------------------------------------------------GLDMSPDDIMGTRSGRLSEA
        IIAE+DL+DSW+KS                                                                  G+ MSPD++ G R+G+ SE 
Subjt:  IIAEKDLYDSWVKS------------------------------------------------------------------GLDMSPDDIMGTRSGRLSEA

Query:  RAGSSGSKRKRGQQALEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQ
        R  SS SKRKRG +  E  E+IRS ME+ N+QLKAIA+WPKE+R      RA+VV+QLQ
Subjt:  RAGSSGSKRKRGQQALEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQ

A0A5A7UME4 Retrotransposon protein9.6e-5647.06Show/hide
Query:  MTTSSKAPKHHWTKKEDVVLVECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPRHNITATTIDCRIKTMKKAFQAISEMRGPSCSGFGWNDELKCI
        MT+SS+ PKH WTK+E+  LVECLVELV++GGWRSDNGTFRPGY + L +M+A ++P  NI A+TID RIK MK+ F A++EMRGP+CSGFGWNDE KCI
Subjt:  MTTSSKAPKHHWTKKEDVVLVECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPRHNITATTIDCRIKTMKKAFQAISEMRGPSCSGFGWNDELKCI

Query:  IAEKDLYDSW---------------------------------------------------------------VKSGLDMSPDDIMGTRSGRLSEARAGS
        +AEK+++D W                                                                  GL+MSPDD+M TR+ R+SE R  S
Subjt:  IAEKDLYDSW---------------------------------------------------------------VKSGLDMSPDDIMGTRSGRLSEARAGS

Query:  SGSKRKRGQQALEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQ
        SGSKRKR   A ++ +I+R+A+EY N+QL  IAEWP  QRQDA+ TR E+VR L+
Subjt:  SGSKRKRGQQALEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQ

A0A5D3C1M0 Retrotransposon protein3.0e-5748.25Show/hide
Query:  MTTSSKAPKHHWTKKEDVVLVECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPRHNITATTIDCRIKTMKKAFQAISEMRGPSCSGFGWNDELKCI
        M +SS+ PKH WTK+E+  LVECLVELV++GGWRSDNGTFRPGY + L +M+A ++P  NI A+TID RIK MK+ F A++EMRGP+CSGFGWNDE KCI
Subjt:  MTTSSKAPKHHWTKKEDVVLVECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPRHNITATTIDCRIKTMKKAFQAISEMRGPSCSGFGWNDELKCI

Query:  IAEKDLYDSWVKS-----------------------------------------------------------------GLDMSPDDIMGTRSGRLSEARA
        + EK+L+D WVKS                                                                 GL+MSPDD+M TR+ R+SE R 
Subjt:  IAEKDLYDSWVKS-----------------------------------------------------------------GLDMSPDDIMGTRSGRLSEARA

Query:  GSSGSKRKRGQQALEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQ
         SSGSKRKR   A ++ +I+R+A+EY N+QL  IAEWP  QRQDAS TR E+VRQL+
Subjt:  GSSGSKRKRGQQALEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQ

E5GBS5 Uncharacterized protein1.1e-5660.94Show/hide
Query:  MTTSSKAPKHHWTKKEDVVLVECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPRHNITATTIDCRIKTMKKAFQAISEMRGPSCSGFGWNDELKCI
        M +SS+  KH W K++D  LVECLV+LV+S GW SDNGTF  GY+S L +M+A++M   NI ATTID  IKTM+K F AISE+RGPSCSGF WNDEL  I
Subjt:  MTTSSKAPKHHWTKKEDVVLVECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPRHNITATTIDCRIKTMKKAFQAISEMRGPSCSGFGWNDELKCI

Query:  IAEKDLYDSWVKSGLDMSPDDIMGTRSGRLSEARAGSSGSKRKRGQQALEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQ
        I EKD++D+W+K GL+MSPD+ M +R GR  + R  SS SKRKR  + +E A II++AMEYANDQL  I +WP  + QDASVT+ EVVRQLQ
Subjt:  IAEKDLYDSWVKSGLDMSPDDIMGTRSGRLSEARAGSSGSKRKRGQQALEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAACTTCTTCAAAGGCCCCGAAGCACCACTGGACGAAAAAGGAGGATGTCGTCCTCGTTGAATGTCTGGTGGAGTTGGTATCATCCGGCGGGTGGAGGTCGGATAA
CGGGACGTTTAGACCCGGGTACCATAGTCATCTACAGAAAATGATTGCCGAGAGGATGCCGAGACATAACATAACGGCTACGACAATAGATTGTCGAATCAAGACAATGA
AAAAAGCATTCCAAGCGATATCTGAAATGAGGGGCCCATCGTGCAGTGGGTTCGGTTGGAATGATGAGCTGAAATGCATCATTGCCGAGAAAGACTTGTATGACAGTTGG
GTTAAGTCAGGACTAGACATGTCACCTGACGACATAATGGGTACACGATCCGGTCGGTTGTCTGAGGCTAGGGCTGGTTCGAGCGGTTCGAAGAGGAAACGGGGACAGCA
GGCATTGGAGGCGGCAGAAATTATTCGCAGTGCCATGGAATATGCTAATGACCAACTGAAGGCCATTGCAGAATGGCCCAAAGAACAACGGCAAGATGCAAGCGTGACAC
GTGCGGAAGTCGTTAGACAACTACAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAACTTCTTCAAAGGCCCCGAAGCACCACTGGACGAAAAAGGAGGATGTCGTCCTCGTTGAATGTCTGGTGGAGTTGGTATCATCCGGCGGGTGGAGGTCGGATAA
CGGGACGTTTAGACCCGGGTACCATAGTCATCTACAGAAAATGATTGCCGAGAGGATGCCGAGACATAACATAACGGCTACGACAATAGATTGTCGAATCAAGACAATGA
AAAAAGCATTCCAAGCGATATCTGAAATGAGGGGCCCATCGTGCAGTGGGTTCGGTTGGAATGATGAGCTGAAATGCATCATTGCCGAGAAAGACTTGTATGACAGTTGG
GTTAAGTCAGGACTAGACATGTCACCTGACGACATAATGGGTACACGATCCGGTCGGTTGTCTGAGGCTAGGGCTGGTTCGAGCGGTTCGAAGAGGAAACGGGGACAGCA
GGCATTGGAGGCGGCAGAAATTATTCGCAGTGCCATGGAATATGCTAATGACCAACTGAAGGCCATTGCAGAATGGCCCAAAGAACAACGGCAAGATGCAAGCGTGACAC
GTGCGGAAGTCGTTAGACAACTACAGTGA
Protein sequenceShow/hide protein sequence
MTTSSKAPKHHWTKKEDVVLVECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPRHNITATTIDCRIKTMKKAFQAISEMRGPSCSGFGWNDELKCIIAEKDLYDSW
VKSGLDMSPDDIMGTRSGRLSEARAGSSGSKRKRGQQALEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQ