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PI0026311 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026311
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRNase H domain-containing protein
Genome locationchr08:7236666..7237692
RNA-Seq ExpressionPI0026311
SyntenyPI0026311
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052791.1 14-3-3-like protein GF14 kappa [Cucumis melo var. makuwa]7.3e-0643.27Show/hide
Query:  GCGMFVD----ASC----SAFRGVTRLGVVIVDEHGSIVGATTKSASGLYAPLLAEMSAIKKGVRFASCFWGVFSNCHNAVRLLCGLSDSIAEVGVFVAD
        G G FV+    A C    SA RGV  LGVV+VDEHGSI+GAT+                               ++C     LLCG SDSIAEVGV V+D
Subjt:  GCGMFVD----ASC----SAFRGVTRLGVVIVDEHGSIVGATTKSASGLYAPLLAEMSAIKKGVRFASCFWGVFSNCHNAVRLLCGLSDSIAEVGVFVAD

Query:  IKAM
        IKAM
Subjt:  IKAM

KAA0067681.1 UMP-CMP kinase isoform X1 [Cucumis melo var. makuwa]5.6e-1431.67Show/hide
Query:  SGYRIFMEHKHSAGCSELLQVRRWWKQLWSLKIPNKVKKFIWRAFHPV---------------------GKG----------------------------
        SGYR+FM H +  GCS+    + WW +LW L IP K+K  +WRAFH +                     GK                             
Subjt:  SGYRIFMEHKHSAGCSELLQVRRWWKQLWSLKIPNKVKKFIWRAFHPV---------------------GKG----------------------------

Query:  ---IGDLAELCFVLVDSLSTLDL----LPRIGVSDPRQFIRLPRHGCGMF--VDASC----SAFRG----------VTRLGVVIVDEHGSIVGATTKSAS
             D ++ C VL DSLS LD     +   G+ D     R+    CG+   VDA C    S  RG          +  +GVV VD +G ++GAT K  S
Subjt:  ---IGDLAELCFVLVDSLSTLDL----LPRIGVSDPRQFIRLPRHGCGMF--VDASC----SAFRG----------VTRLGVVIVDEHGSIVGATTKSAS

Query:  GLYAPLLAEMSAIKKGVRFAS
         L +PLL E  AIK+G+  AS
Subjt:  GLYAPLLAEMSAIKKGVRFAS

XP_030500352.1 uncharacterized protein LOC115715819 [Cannabis sativa]5.0e-0728.29Show/hide
Query:  WWKQLWSLKIPNKVKKFIWRAFH---PVG------KGIGDLAELCFVLVDSL-----------------STLDLLPRIGVSDPRQFIRLPRHG-CGMFVD
        WW  LWSL +P K+K FIWRAF+   PV       K I D     F L  SL                 +T   LP+I  + P      P  G   M VD
Subjt:  WWKQLWSLKIPNKVKKFIWRAFH---PVG------KGIGDLAELCFVLVDSL-----------------STLDLLPRIGVSDPRQFIRLPRHG-CGMFVD

Query:  ASCSAFRGVTRLGVVIVDEHGSIVGATTKSASGLYA----PLLAEMSAIKKGVRFASCFWGVFSNCHNAVRLLCGLSDSIAEVGVFVADIKAMLSAFRGM
        A+  + R +T +G +I   +G +V A +K   G YA      +A    +   ++       V ++       LC  S +I+     +ADI ++LS F  +
Subjt:  ASCSAFRGVTRLGVVIVDEHGSIVGATTKSASGLYA----PLLAEMSAIKKGVRFASCFWGVFSNCHNAVRLLCGLSDSIAEVGVFVADIKAMLSAFRGM

Query:  EFHYI
           ++
Subjt:  EFHYI

XP_030508875.1 uncharacterized protein LOC115723521 [Cannabis sativa]9.5e-0627.98Show/hide
Query:  WWKQLWSLKIPNKVKKFIWRAFHPV---------------------GKGIGDLAELCFVLVDSLSTLDLLPRIGVSDPRQFIRLPRHGCGMFVDASCSAF
        WWK LW+LKIP K+K F W+AF+ +                     G GI        +L   L  L   P    S       L      +FVDA+ S  
Subjt:  WWKQLWSLKIPNKVKKFIWRAFHPV---------------------GKGIGDLAELCFVLVDSLSTLDLLPRIGVSDPRQFIRLPRHGCGMFVDASCSAF

Query:  RGVTRLGVVIVDEHGSIVGATTKSASGLYAPLLAEMSAIKKGVRFASCFWG------VFSNCHNAVRLLCGLSDSIAEVGVFVADIKAMLSAF
           T LG+V V     I    + + SG  +P+ AE  A+ +G+++  C         +FS+C N V  + G     + +   V  I+  LS F
Subjt:  RGVTRLGVVIVDEHGSIVGATTKSASGLYAPLLAEMSAIKKGVRFASCFWG------VFSNCHNAVRLLCGLSDSIAEVGVFVADIKAMLSAF

XP_030509336.1 uncharacterized protein LOC115724021 [Cannabis sativa]6.2e-0523.64Show/hide
Query:  SGYRIFMEHKHSAGCSELLQVRRWWKQLWSLKIPNKVKKFIWRAFH---PVGKGIGDLAEL------------------CFVLVDSLSTLDLLPRIGVSD
        SGY +  + + S   +       WWK  W+L++P+KVK F+W+AFH   P+         L                  CF          +  + G+S 
Subjt:  SGYRIFMEHKHSAGCSELLQVRRWWKQLWSLKIPNKVKKFIWRAFH---PVGKGIGDLAEL------------------CFVLVDSLSTLDLLPRIGVSD

Query:  PRQFIRLPRHGCGMFVDASCSA--------FRGVTRLGVVIVDEHGSIVGATTKSASGLYAPLLAEMSAIKKGVRFAS-CFWGV---FSNCHNAVRLLCG
         + + +   + C     ++ S         FR    +G++I +  G +V A +K  +G   P   E  A+  G+ +A+ C   +    S+    V  +  
Subjt:  PRQFIRLPRHGCGMFVDASCSA--------FRGVTRLGVVIVDEHGSIVGATTKSASGLYAPLLAEMSAIKKGVRFAS-CFWGV---FSNCHNAVRLLCG

Query:  LSDSIAEVGVFVADIKAMLS
        +S++I+  G  V DIK  LS
Subjt:  LSDSIAEVGVFVADIKAMLS

TrEMBL top hitse value%identityAlignment
A0A5A7VQ24 Adenylate kinase2.7e-1431.67Show/hide
Query:  SGYRIFMEHKHSAGCSELLQVRRWWKQLWSLKIPNKVKKFIWRAFHPV---------------------GKG----------------------------
        SGYR+FM H +  GCS+    + WW +LW L IP K+K  +WRAFH +                     GK                             
Subjt:  SGYRIFMEHKHSAGCSELLQVRRWWKQLWSLKIPNKVKKFIWRAFHPV---------------------GKG----------------------------

Query:  ---IGDLAELCFVLVDSLSTLDL----LPRIGVSDPRQFIRLPRHGCGMF--VDASC----SAFRG----------VTRLGVVIVDEHGSIVGATTKSAS
             D ++ C VL DSLS LD     +   G+ D     R+    CG+   VDA C    S  RG          +  +GVV VD +G ++GAT K  S
Subjt:  ---IGDLAELCFVLVDSLSTLDL----LPRIGVSDPRQFIRLPRHGCGMF--VDASC----SAFRG----------VTRLGVVIVDEHGSIVGATTKSAS

Query:  GLYAPLLAEMSAIKKGVRFAS
         L +PLL E  AIK+G+  AS
Subjt:  GLYAPLLAEMSAIKKGVRFAS

A0A803NLN2 Uncharacterized protein3.4e-0925.87Show/hide
Query:  SGYRIFMEHKHSAGCSELLQVRRWWKQLWSLKIPNKVKKFIWRAFHPVGKGIGDLAELCFVLVDSLSTLDLLPRIGVSDPRQFIRLPRHGC--GMFVDAS
        SGYR+    +     S ++   RWW ++W LK+P KVK F+W+  H              VL         L R   S   + +     GC  G+ V   
Subjt:  SGYRIFMEHKHSAGCSELLQVRRWWKQLWSLKIPNKVKKFIWRAFHPVGKGIGDLAELCFVLVDSLSTLDLLPRIGVSDPRQFIRLPRHGC--GMFVDAS

Query:  CSAFRGVTRLGVVIVDEHGSIVGATTKSASGLYAPLLAEMSA----IKKGVRFASCFWGVFSNCHNAVRLLCGLSDSIAEVGVFVADIKAMLSAFRGMEF
        C  +  + + G+V  +E+G  + AT    SG   PL AE+ A    I  G++     + V S+C  A+ L+  + +   +V   + +I+ +L +      
Subjt:  CSAFRGVTRLGVVIVDEHGSIVGATTKSASGLYAPLLAEMSA----IKKGVRFASCFWGVFSNCHNAVRLLCGLSDSIAEVGVFVADIKAMLSAFRGMEF

Query:  H
        H
Subjt:  H

A0A803PY89 Uncharacterized protein9.9e-0925.25Show/hide
Query:  SGYRIFMEHKHSAGCSELLQVRRWWKQLWSLKIPNKVKKFIWRAFHPVGKGIGDLAELCFVLVDSLSTLDLLPRIGVSDPRQFIRLPRHGCGMFVDASCS
        SGY++   H     CS    ++ WWK +W  K+  K+K FIWR F+   + +    EL   ++ S    D+ P+     P      P     + +DAS  
Subjt:  SGYRIFMEHKHSAGCSELLQVRRWWKQLWSLKIPNKVKKFIWRAFHPVGKGIGDLAELCFVLVDSLSTLDLLPRIGVSDPRQFIRLPRHGCGMFVDASCS

Query:  AFRGVTRLGVVIVDEHGSIVGATTKSASGLYAPLLAEMSAIKKGVRFASCFWG-----VFSNCHNAVRLLCGLSDSIAEVGVFVADIKAMLSAFRGMEFH
          +    L  +I D +G ++ A +    G+ +  LAE  AI+ G+  A   W      V ++C   V  L     S+++ G+ + +I  +   F  ++F 
Subjt:  AFRGVTRLGVVIVDEHGSIVGATTKSASGLYAPLLAEMSAIKKGVRFASCFWG-----VFSNCHNAVRLLCGLSDSIAEVGVFVADIKAMLSAFRGMEFH

Query:  YI
        ++
Subjt:  YI

A0A803QHJ7 Uncharacterized protein6.4e-0823.17Show/hide
Query:  SGYRIFMEHKHSAGCSELLQVRRWWKQLWSLKIPNKVKKFIWRAFH------------------------PVGKGI------------------------
        SGYR+  E K     S+     +WW++LW LKIP K+K F+W+  H                        P    I                        
Subjt:  SGYRIFMEHKHSAGCSELLQVRRWWKQLWSLKIPNKVKKFIWRAFH------------------------PVGKGI------------------------

Query:  ------GDLAELCFVLVDSLSTLDLLPRIGVSDPRQFIRLPRHG-CGMFVDASCSAFRGVTRLGVVIVDEHGSIVGATTKSASGLYAPLLAEMSAIKKGV
               ++ E C+ L+         P+  +       ++PRHG   + VD       G + LG VI  E G ++ A++ +    Y+PL  E+ AI KG+
Subjt:  ------GDLAELCFVLVDSLSTLDLLPRIGVSDPRQFIRLPRHG-CGMFVDASCSAFRGVTRLGVVIVDEHGSIVGATTKSASGLYAPLLAEMSAIKKGV

Query:  RFA----SCFWGVFSNCHNAVRLLCGLSDSIAEVGVFVADIKAMLS
        +         + + S+C  A++L+    D   +V   +  I+ +LS
Subjt:  RFA----SCFWGVFSNCHNAVRLLCGLSDSIAEVGVFVADIKAMLS

A0A803QNQ9 Uncharacterized protein7.6e-0925.13Show/hide
Query:  SAGCSELLQVRRWWKQLWSLKIPNKVKKFIWRAFHPVGKGIGDLAELCFVLVDSLSTLDLLPRIGVSDPRQF-----IRLPRHGCGMFVDASCSAFRGVT
        S G S     +RWW  +WS  IP K+K F+W+AFH        +      L +     D   RI  S          + +P     + VDA+ S      
Subjt:  SAGCSELLQVRRWWKQLWSLKIPNKVKKFIWRAFHPVGKGIGDLAELCFVLVDSLSTLDLLPRIGVSDPRQF-----IRLPRHGCGMFVDASCSAFRGVT

Query:  RLGVVIVDEHGSIVGATTKSASGLYAPLLAEMSAIKKGVRFASC----FWGVFSNCHNAVRLLCGLSDSIAEVGVFVADIKAMLSAFRGMEFHYI
          G ++ D  G+++ + T  +    AP+ AE  A+ + + +          + S+C + V  +   S   + +   +A I + LS+F G   HYI
Subjt:  RLGVVIVDEHGSIVGATTKSASGLYAPLLAEMSAIKKGVRFASC----FWGVFSNCHNAVRLLCGLSDSIAEVGVFVADIKAMLSAFRGMEFHYI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTTGGATTGTCTTCGGGTGTTTCTTACTTAGGAGGAATTTCGCTTAGTGGTTATCGAATTTTTATGGAGCACAAACATTCTGCTGGGTGTTCCGAGTTGTTGCA
GGTGAGGAGATGGTGGAAGCAACTTTGGAGTTTGAAGATTCCTAATAAAGTTAAAAAATTTATTTGGCGTGCCTTCCATCCGGTGGGGAAAGGGATTGGGGACTTAGCTG
AGCTTTGTTTTGTGTTGGTGGATTCCCTTTCCACTTTGGATTTGCTTCCTCGCATTGGTGTTTCTGATCCGCGACAGTTTATTAGGCTTCCGAGACATGGTTGTGGCATG
TTTGTGGATGCATCCTGCTCGGCGTTTCGGGGTGTGACGAGGCTTGGTGTAGTCATAGTTGATGAGCATGGTTCTATTGTGGGGGCGACGACTAAGTCAGCTTCAGGCCT
GTATGCTCCTTTATTGGCTGAAATGTCGGCGATTAAAAAGGGAGTACGGTTTGCTTCTTGCTTCTGGGGTGTTTTCTCTAATTGTCATAATGCAGTCAGATTACTCTGTG
GGCTTTCTGATTCTATTGCTGAAGTTGGGGTCTTTGTCGCTGACATCAAAGCTATGTTGTCTGCATTCCGGGGTATGGAGTTTCACTATATTGGCAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAATTTGGATTGTCTTCGGGTGTTTCTTACTTAGGAGGAATTTCGCTTAGTGGTTATCGAATTTTTATGGAGCACAAACATTCTGCTGGGTGTTCCGAGTTGTTGCA
GGTGAGGAGATGGTGGAAGCAACTTTGGAGTTTGAAGATTCCTAATAAAGTTAAAAAATTTATTTGGCGTGCCTTCCATCCGGTGGGGAAAGGGATTGGGGACTTAGCTG
AGCTTTGTTTTGTGTTGGTGGATTCCCTTTCCACTTTGGATTTGCTTCCTCGCATTGGTGTTTCTGATCCGCGACAGTTTATTAGGCTTCCGAGACATGGTTGTGGCATG
TTTGTGGATGCATCCTGCTCGGCGTTTCGGGGTGTGACGAGGCTTGGTGTAGTCATAGTTGATGAGCATGGTTCTATTGTGGGGGCGACGACTAAGTCAGCTTCAGGCCT
GTATGCTCCTTTATTGGCTGAAATGTCGGCGATTAAAAAGGGAGTACGGTTTGCTTCTTGCTTCTGGGGTGTTTTCTCTAATTGTCATAATGCAGTCAGATTACTCTGTG
GGCTTTCTGATTCTATTGCTGAAGTTGGGGTCTTTGTCGCTGACATCAAAGCTATGTTGTCTGCATTCCGGGGTATGGAGTTTCACTATATTGGCAAATAA
Protein sequenceShow/hide protein sequence
MEFGLSSGVSYLGGISLSGYRIFMEHKHSAGCSELLQVRRWWKQLWSLKIPNKVKKFIWRAFHPVGKGIGDLAELCFVLVDSLSTLDLLPRIGVSDPRQFIRLPRHGCGM
FVDASCSAFRGVTRLGVVIVDEHGSIVGATTKSASGLYAPLLAEMSAIKKGVRFASCFWGVFSNCHNAVRLLCGLSDSIAEVGVFVADIKAMLSAFRGMEFHYIGK