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PI0026325 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026325
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr12:16247340..16247855
RNA-Seq ExpressionPI0026325
SyntenyPI0026325
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034013.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]3.5e-6473.12Show/hide
Query:  MENIHYIYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPLVRQTQSGTGDVSPMMLMPAFGTGYYDSRVSQSSDFGTGYYNSEAGSSSSNFGQGYYDL
        MENIHY+Y+VPIVPAPVQRRR  VQEPD+LEEV+QH +EVP + QTQS    VSP+M+MP FGT YYDS V QSSDFG GYYNSEAG SS++FGQ YYDL
Subjt:  MENIHYIYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPLVRQTQSGTGDVSPMMLMPAFGTGYYDSRVSQSSDFGTGYYNSEAGSSSSNFGQGYYDL

Query:  GTDPSSSYMHGHGRGRGEHNEYLYYEPPAAVPE---------------QPDEQQRQENQEGLEQQRVQGRRWQPARNRRRPGCGTH
        G+DPSSSYMHGHGRGRGEHNEYLYYE PAAVPE               Q DEQQ+QENQE ++QQRVQ RR QPARNRRRPGCGTH
Subjt:  GTDPSSSYMHGHGRGRGEHNEYLYYEPPAAVPE---------------QPDEQQRQENQEGLEQQRVQGRRWQPARNRRRPGCGTH

KAA0036767.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.5e-6271.51Show/hide
Query:  MENIHYIYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPLVRQTQSGTGDVSPMMLMPAFGTGYYDSRVSQSSDFGTGYYNSEAGSSSSNFGQGYYDL
        MENIHY+Y+VPIVPAPVQRRR  VQEPD+LEEV+QH +EVP + QTQS    VSP+M+MP FGT YYDS V QSSDFG GYYNS+AG SS++FGQ YYDL
Subjt:  MENIHYIYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPLVRQTQSGTGDVSPMMLMPAFGTGYYDSRVSQSSDFGTGYYNSEAGSSSSNFGQGYYDL

Query:  GTDPSSSYMHGHGRGRGEHNEYLYYEPPAAVPE---------------QPDEQQRQENQEGLEQQRVQGRRWQPARNRRRPGCGTH
        G+DPSSSYMHGHGRGRG+HNEYLYYE PAAVPE               Q DEQQ+QEN E ++QQRVQ RR QPARNRRRPGCGTH
Subjt:  GTDPSSSYMHGHGRGRGEHNEYLYYEPPAAVPE---------------QPDEQQRQENQEGLEQQRVQGRRWQPARNRRRPGCGTH

KAA0055624.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.0e-6372.58Show/hide
Query:  MENIHYIYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPLVRQTQSGTGDVSPMMLMPAFGTGYYDSRVSQSSDFGTGYYNSEAGSSSSNFGQGYYDL
        MENIHY+Y+VPIVPAPVQRRR  VQEPD+LEEV+QH +EVP + QT+S    VSP+M+MP FGT YYDS V QSSDFG GYYNSEAG SS++FGQ YYDL
Subjt:  MENIHYIYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPLVRQTQSGTGDVSPMMLMPAFGTGYYDSRVSQSSDFGTGYYNSEAGSSSSNFGQGYYDL

Query:  GTDPSSSYMHGHGRGRGEHNEYLYYEPPAAVPEQPDE---------------QQRQENQEGLEQQRVQGRRWQPARNRRRPGCGTH
        G+DPSSSYMHGHGRGRGEHNEYLYYE PAAVPEQ DE               QQ+QENQE ++QQRVQ RR QPARNRRRPGCGTH
Subjt:  GTDPSSSYMHGHGRGRGEHNEYLYYEPPAAVPEQPDE---------------QQRQENQEGLEQQRVQGRRWQPARNRRRPGCGTH

KAA0067080.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.1e-6473.12Show/hide
Query:  MENIHYIYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPLVRQTQSGTGDVSPMMLMPAFGTGYYDSRVSQSSDFGTGYYNSEAGSSSSNFGQGYYDL
        MENIHY+Y+VPIVPAPVQRRR  VQEPD+LEEV+QH +EVP + QTQS    VSP+M+MP FGT YYDS V QSSDFG GYYNSEAG SS++FGQ YYDL
Subjt:  MENIHYIYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPLVRQTQSGTGDVSPMMLMPAFGTGYYDSRVSQSSDFGTGYYNSEAGSSSSNFGQGYYDL

Query:  GTDPSSSYMHGHGRGRGEHNEYLYYEPPAAVPE---------------QPDEQQRQENQEGLEQQRVQGRRWQPARNRRRPGCGTH
        G+DPSSSYMHGHGRGRGEHNEYLYYE PAAVPE               Q DEQQ+QENQE ++QQRVQ RR QPARNRRRPGCGTH
Subjt:  GTDPSSSYMHGHGRGRGEHNEYLYYEPPAAVPE---------------QPDEQQRQENQEGLEQQRVQGRRWQPARNRRRPGCGTH

TYK18891.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.1e-6272.34Show/hide
Query:  MENIHYIYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPLV--RQTQSGTGDVSPMMLMPAFGTGYYDSRVSQSSDFGTGYYNSEAGSSSSNFGQGYY
        MENIHY+Y+VPIVPAPVQRRR  VQEPD+LEEV+QH +EVP +   QTQS    VSP+M+MP FGT YYDS V QSSDFG GYYNSEAG SS++FGQ YY
Subjt:  MENIHYIYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPLV--RQTQSGTGDVSPMMLMPAFGTGYYDSRVSQSSDFGTGYYNSEAGSSSSNFGQGYY

Query:  DLGTDPSSSYMHGHGRGRGEHNEYLYYEPPAAVPE---------------QPDEQQRQENQEGLEQQRVQGRRWQPARNRRRPGCGTH
        DLG+DPSSSYMHGHGRGRGEHNEYLYYE PAAVPE               Q DEQQ+QENQE ++QQRVQ RR QPARNRRRPGCGTH
Subjt:  DLGTDPSSSYMHGHGRGRGEHNEYLYYEPPAAVPE---------------QPDEQQRQENQEGLEQQRVQGRRWQPARNRRRPGCGTH

TrEMBL top hitse value%identityAlignment
A0A5A7SU33 Serine/threonine-protein phosphatase 7 long form-like protein1.7e-6473.12Show/hide
Query:  MENIHYIYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPLVRQTQSGTGDVSPMMLMPAFGTGYYDSRVSQSSDFGTGYYNSEAGSSSSNFGQGYYDL
        MENIHY+Y+VPIVPAPVQRRR  VQEPD+LEEV+QH +EVP + QTQS    VSP+M+MP FGT YYDS V QSSDFG GYYNSEAG SS++FGQ YYDL
Subjt:  MENIHYIYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPLVRQTQSGTGDVSPMMLMPAFGTGYYDSRVSQSSDFGTGYYNSEAGSSSSNFGQGYYDL

Query:  GTDPSSSYMHGHGRGRGEHNEYLYYEPPAAVPE---------------QPDEQQRQENQEGLEQQRVQGRRWQPARNRRRPGCGTH
        G+DPSSSYMHGHGRGRGEHNEYLYYE PAAVPE               Q DEQQ+QENQE ++QQRVQ RR QPARNRRRPGCGTH
Subjt:  GTDPSSSYMHGHGRGRGEHNEYLYYEPPAAVPE---------------QPDEQQRQENQEGLEQQRVQGRRWQPARNRRRPGCGTH

A0A5A7UKC7 Serine/threonine-protein phosphatase 7 long form-like protein5.0e-6472.58Show/hide
Query:  MENIHYIYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPLVRQTQSGTGDVSPMMLMPAFGTGYYDSRVSQSSDFGTGYYNSEAGSSSSNFGQGYYDL
        MENIHY+Y+VPIVPAPVQRRR  VQEPD+LEEV+QH +EVP + QT+S    VSP+M+MP FGT YYDS V QSSDFG GYYNSEAG SS++FGQ YYDL
Subjt:  MENIHYIYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPLVRQTQSGTGDVSPMMLMPAFGTGYYDSRVSQSSDFGTGYYNSEAGSSSSNFGQGYYDL

Query:  GTDPSSSYMHGHGRGRGEHNEYLYYEPPAAVPEQPDE---------------QQRQENQEGLEQQRVQGRRWQPARNRRRPGCGTH
        G+DPSSSYMHGHGRGRGEHNEYLYYE PAAVPEQ DE               QQ+QENQE ++QQRVQ RR QPARNRRRPGCGTH
Subjt:  GTDPSSSYMHGHGRGRGEHNEYLYYEPPAAVPEQPDE---------------QQRQENQEGLEQQRVQGRRWQPARNRRRPGCGTH

A0A5A7VIP6 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.0e-6473.12Show/hide
Query:  MENIHYIYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPLVRQTQSGTGDVSPMMLMPAFGTGYYDSRVSQSSDFGTGYYNSEAGSSSSNFGQGYYDL
        MENIHY+Y+VPIVPAPVQRRR  VQEPD+LEEV+QH +EVP + QTQS    VSP+M+MP FGT YYDS V QSSDFG GYYNSEAG SS++FGQ YYDL
Subjt:  MENIHYIYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPLVRQTQSGTGDVSPMMLMPAFGTGYYDSRVSQSSDFGTGYYNSEAGSSSSNFGQGYYDL

Query:  GTDPSSSYMHGHGRGRGEHNEYLYYEPPAAVPE---------------QPDEQQRQENQEGLEQQRVQGRRWQPARNRRRPGCGTH
        G+DPSSSYMHGHGRGRGEHNEYLYYE PAAVPE               Q DEQQ+QENQE ++QQRVQ RR QPARNRRRPGCGTH
Subjt:  GTDPSSSYMHGHGRGRGEHNEYLYYEPPAAVPE---------------QPDEQQRQENQEGLEQQRVQGRRWQPARNRRRPGCGTH

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein7.2e-6371.51Show/hide
Query:  MENIHYIYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPLVRQTQSGTGDVSPMMLMPAFGTGYYDSRVSQSSDFGTGYYNSEAGSSSSNFGQGYYDL
        MENIHY+Y+VPIVPAPVQRRR  VQEPD+LEEV+QH +EVP + QTQS    VSP+M+MP FGT YYDS V QSSDFG GYYNS+AG SS++FGQ YYDL
Subjt:  MENIHYIYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPLVRQTQSGTGDVSPMMLMPAFGTGYYDSRVSQSSDFGTGYYNSEAGSSSSNFGQGYYDL

Query:  GTDPSSSYMHGHGRGRGEHNEYLYYEPPAAVPE---------------QPDEQQRQENQEGLEQQRVQGRRWQPARNRRRPGCGTH
        G+DPSSSYMHGHGRGRG+HNEYLYYE PAAVPE               Q DEQQ+QEN E ++QQRVQ RR QPARNRRRPGCGTH
Subjt:  GTDPSSSYMHGHGRGRGEHNEYLYYEPPAAVPE---------------QPDEQQRQENQEGLEQQRVQGRRWQPARNRRRPGCGTH

A0A5D3D5R5 Mediator of RNA polymerase II transcription subunit 12-like isoform X15.5e-6372.34Show/hide
Query:  MENIHYIYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPLV--RQTQSGTGDVSPMMLMPAFGTGYYDSRVSQSSDFGTGYYNSEAGSSSSNFGQGYY
        MENIHY+Y+VPIVPAPVQRRR  VQEPD+LEEV+QH +EVP +   QTQS    VSP+M+MP FGT YYDS V QSSDFG GYYNSEAG SS++FGQ YY
Subjt:  MENIHYIYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPLV--RQTQSGTGDVSPMMLMPAFGTGYYDSRVSQSSDFGTGYYNSEAGSSSSNFGQGYY

Query:  DLGTDPSSSYMHGHGRGRGEHNEYLYYEPPAAVPE---------------QPDEQQRQENQEGLEQQRVQGRRWQPARNRRRPGCGTH
        DLG+DPSSSYMHGHGRGRGEHNEYLYYE PAAVPE               Q DEQQ+QENQE ++QQRVQ RR QPARNRRRPGCGTH
Subjt:  DLGTDPSSSYMHGHGRGRGEHNEYLYYEPPAAVPE---------------QPDEQQRQENQEGLEQQRVQGRRWQPARNRRRPGCGTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACATACACTATATATACAATGTACCTATTGTACCTGCACCAGTTCAAAGGAGACGTGCTCGAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAACAACATGT
GCAAGAAGTGCCTCTTGTGAGACAAACACAAAGCGGGACTGGTGACGTTAGTCCAATGATGTTGATGCCGGCATTTGGAACGGGATATTATGATTCAAGAGTCAGTCAAT
CGTCAGACTTCGGGACAGGATATTATAATTCAGAGGCAGGTTCATCATCGTCAAACTTTGGACAAGGATACTACGATTTAGGGACTGATCCATCATCTTCATACATGCAT
GGACATGGGCGTGGTCGTGGAGAACATAACGAATATTTGTACTACGAACCGCCTGCAGCGGTACCCGAGCAGCCAGATGAACAACAACGACAAGAGAATCAGGAGGGACT
AGAGCAACAAAGAGTGCAGGGTCGACGATGGCAACCAGCTAGAAATCGGCGACGTCCAGGTTGTGGAACACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAACATACACTATATATACAATGTACCTATTGTACCTGCACCAGTTCAAAGGAGACGTGCTCGAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAACAACATGT
GCAAGAAGTGCCTCTTGTGAGACAAACACAAAGCGGGACTGGTGACGTTAGTCCAATGATGTTGATGCCGGCATTTGGAACGGGATATTATGATTCAAGAGTCAGTCAAT
CGTCAGACTTCGGGACAGGATATTATAATTCAGAGGCAGGTTCATCATCGTCAAACTTTGGACAAGGATACTACGATTTAGGGACTGATCCATCATCTTCATACATGCAT
GGACATGGGCGTGGTCGTGGAGAACATAACGAATATTTGTACTACGAACCGCCTGCAGCGGTACCCGAGCAGCCAGATGAACAACAACGACAAGAGAATCAGGAGGGACT
AGAGCAACAAAGAGTGCAGGGTCGACGATGGCAACCAGCTAGAAATCGGCGACGTCCAGGTTGTGGAACACATTGA
Protein sequenceShow/hide protein sequence
MENIHYIYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPLVRQTQSGTGDVSPMMLMPAFGTGYYDSRVSQSSDFGTGYYNSEAGSSSSNFGQGYYDLGTDPSSSYMH
GHGRGRGEHNEYLYYEPPAAVPEQPDEQQRQENQEGLEQQRVQGRRWQPARNRRRPGCGTH