; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0026372 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026372
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationchr06:12291313..12292296
RNA-Seq ExpressionPI0026372
SyntenyPI0026372
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0010158 - abaxial cell fate specification (biological process)
GO:0015074 - DNA integration (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
InterPro domainsIPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637370.1 hypothetical protein CSA_004463 [Cucumis sativus]5.1e-13674.92Show/hide
Query:  MVFVILCDNQLFVNRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLRGFLGLTGYYRRFVRGYGEISAPLTKHLQKNVFYWSEEATK
        MVF +L DN LF N+KKCVIAHS+IQYLGH IS +GV+ADEEKI  M+ WP+PKDVTGLRGFLGL+GYYRRFV+GYGEI+APLT+ LQKN F W E+AT+
Subjt:  MVFVILCDNQLFVNRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLRGFLGLTGYYRRFVRGYGEISAPLTKHLQKNVFYWSEEATK

Query:  AFENLKNAMVTIPVLALPDWPLPFIIETNASGVGLGAVLSKQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE
        AFE LK AM TIPVLALP+W LPF+IET+ASG GLGAVLS+ GHPIAF +QKLS R QAKSIYERELM VVLSVQKWRHYLLGRKF +ISDQKALKFLLE
Subjt:  AFENLKNAMVTIPVLALPDWPLPFIIETNASGVGLGAVLSKQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE

Query:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSPELRLITTPGIMDLEVAMKEVEEDREVQQLIDNLKQHPEEASKYQWENERLLYKGRLV
        QREVQPQFQKWLTKLLGYDFEILYQP LQNK ADALS +E   E+  +TT GI+D+EV  KEV +D E+Q+ I  LKQ+PE  SK+ WEN +L YK R+V
Subjt:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSPELRLITTPGIMDLEVAMKEVEEDREVQQLIDNLKQHPEEASKYQWENERLLYKGRLV

Query:  LSKQSTLIPNLLPTFHDSILGGHSGFL
        LSK+S++IP LL TFHDSILGGHSGFL
Subjt:  LSKQSTLIPNLLPTFHDSILGGHSGFL

KAE8637561.1 hypothetical protein CSA_017659 [Cucumis sativus]1.3e-13675.54Show/hide
Query:  MVFVILCDNQLFVNRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLRGFLGLTGYYRRFVRGYGEISAPLTKHLQKNVFYWSEEATK
        MVF +L DN LF N+KKCVIAHS+IQYLGH IS +GV+ADEEKI  M+ WP+PKDVTGLRGFLGL+GYYRRFV+GYGEI+APLT+ LQKN F W E+AT 
Subjt:  MVFVILCDNQLFVNRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLRGFLGLTGYYRRFVRGYGEISAPLTKHLQKNVFYWSEEATK

Query:  AFENLKNAMVTIPVLALPDWPLPFIIETNASGVGLGAVLSKQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE
        AFE LK AM TIPVLALP+W LPF+IET+ASG GLGAVLS+ GHPIAF +QKLS R QAKSIYERELMVVVLSVQKWRHYLLGRKF +ISDQKALKFLLE
Subjt:  AFENLKNAMVTIPVLALPDWPLPFIIETNASGVGLGAVLSKQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE

Query:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSPELRLITTPGIMDLEVAMKEVEEDREVQQLIDNLKQHPEEASKYQWENERLLYKGRLV
        QREVQPQFQKWLTKLLGYDFEILYQP LQNK ADALS +E S E+  +TT GI+D+EV  KEV +D E+Q+ I  LKQ+P+  SK+ WEN +LLYK R+V
Subjt:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSPELRLITTPGIMDLEVAMKEVEEDREVQQLIDNLKQHPEEASKYQWENERLLYKGRLV

Query:  LSKQSTLIPNLLPTFHDSILGGHSGFL
        LSK S++IP LL TFHDSILGGHSGFL
Subjt:  LSKQSTLIPNLLPTFHDSILGGHSGFL

KAE8637598.1 hypothetical protein CSA_022681 [Cucumis sativus]2.4e-13875.54Show/hide
Query:  MVFVILCDNQLFVNRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLRGFLGLTGYYRRFVRGYGEISAPLTKHLQKNVFYWSEEATK
        MVF IL D++LF NR KCVIAHSQ+QYLGH IS RGVEADE+KI  M+NWP+PKD+TGLRGFLGLTGYYRRFV+ YGEI+APLTK LQKN F+W+EEAT 
Subjt:  MVFVILCDNQLFVNRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLRGFLGLTGYYRRFVRGYGEISAPLTKHLQKNVFYWSEEATK

Query:  AFENLKNAMVTIPVLALPDWPLPFIIETNASGVGLGAVLSKQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE
        AF+ LK AM T+PVLALPDW  PF IET+ASGVGLGAVLS+ GHPIAF +QKLSPR Q KSIYERELM VVLSVQKWRHYLLGRKF ++SDQKALKFLLE
Subjt:  AFENLKNAMVTIPVLALPDWPLPFIIETNASGVGLGAVLSKQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE

Query:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSPELRLITTPGIMDLEVAMKEVEEDREVQQLIDNLKQHPEEASKYQWENERLLYKGRLV
        QREVQPQFQKWLTKLLGYDFEILYQP LQNKVADALS  + S EL  +TT GI+D+E+  KEVE D+E+Q++I  LK   ++  KYQW N RLLYKGR+V
Subjt:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSPELRLITTPGIMDLEVAMKEVEEDREVQQLIDNLKQHPEEASKYQWENERLLYKGRLV

Query:  LSKQSTLIPNLLPTFHDSILGGHSGFL
        L + S+LIP+LL TFHDSILGGHSGFL
Subjt:  LSKQSTLIPNLLPTFHDSILGGHSGFL

KGN62557.2 hypothetical protein Csa_018739 [Cucumis sativus]1.9e-13574.31Show/hide
Query:  MVFVILCDNQLFVNRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLRGFLGLTGYYRRFVRGYGEISAPLTKHLQKNVFYWSEEATK
        MVF ++ DNQL  N+KKCVIAHSQIQYLGH IS RGVEAD +KI  M+NWP+PKDVTGLRGFLGLTGYYRRFV+GYGE++ PLTK LQKN F W EEAT+
Subjt:  MVFVILCDNQLFVNRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLRGFLGLTGYYRRFVRGYGEISAPLTKHLQKNVFYWSEEATK

Query:  AFENLKNAMVTIPVLALPDWPLPFIIETNASGVGLGAVLSKQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE
        AF+ LK AM T+PVLALPDW LPFIIET+ASG+ LGAVLS+ GHPIAF +QKLS R + KSIYERELM VVLSVQKWRHYLLGRKF +ISDQ+ALKFLLE
Subjt:  AFENLKNAMVTIPVLALPDWPLPFIIETNASGVGLGAVLSKQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE

Query:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSPELRLITTPGIMDLEVAMKEVEEDREVQQLIDNLKQHPEEASKYQWENERLLYKGRLV
        QREVQPQFQKWLTKLLGYDFEILYQP LQNK ADALS +E   E++ ++T GI+++EV  KEVE D E++ +I+ LKQ+P+E SK+QW N  L YK R+V
Subjt:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSPELRLITTPGIMDLEVAMKEVEEDREVQQLIDNLKQHPEEASKYQWENERLLYKGRLV

Query:  LSKQSTLIPNLLPTFHDSILGGHSGFL
        LSK+STLIP LL TFHDSILGGHSGFL
Subjt:  LSKQSTLIPNLLPTFHDSILGGHSGFL

TYK03842.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]2.1e-13474.31Show/hide
Query:  MVFVILCDNQLFVNRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLRGFLGLTGYYRRFVRGYGEISAPLTKHLQKNVFYWSEEATK
        MVF  L DNQL+ NRKKCV AHSQI YLGH ISK GVEAD++K+  M+ WPKPKDVTGLRGFLGLTGYYRRFV+GYGEI+APLTK LQKN F W E AT 
Subjt:  MVFVILCDNQLFVNRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLRGFLGLTGYYRRFVRGYGEISAPLTKHLQKNVFYWSEEATK

Query:  AFENLKNAMVTIPVLALPDWPLPFIIETNASGVGLGAVLSKQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE
        AFE+LK+AM TIPVLALPDW LPF+IET+ASG GLGAVLS+  HPIAF +QKLS R QAKSIYERELM VVLSVQKWRHYLLGR+F ++SDQKALKFLLE
Subjt:  AFENLKNAMVTIPVLALPDWPLPFIIETNASGVGLGAVLSKQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE

Query:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSPELRLITTPGIMDLEVAMKEVEEDREVQQLIDNLKQHPEEASKYQWENERLLYKGRLV
        QREVQPQFQKWLTKLLGYDFEILYQP LQNK ADALS ++ S EL+ ++T GI+D+EV  KEVE+D E+Q LI  L+ +P    KY   N  L+YKGR+V
Subjt:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSPELRLITTPGIMDLEVAMKEVEEDREVQQLIDNLKQHPEEASKYQWENERLLYKGRLV

Query:  LSKQSTLIPNLLPTFHDSILGGHSGFL
        LSK S++IP+LL TFHDSILGGHSGFL
Subjt:  LSKQSTLIPNLLPTFHDSILGGHSGFL

TrEMBL top hitse value%identityAlignment
A0A5D3BBH7 Ty3/gypsy retrotransposon protein1.4e-13474.31Show/hide
Query:  MVFVILCDNQLFVNRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLRGFLGLTGYYRRFVRGYGEISAPLTKHLQKNVFYWSEEATK
        MVF  L DNQL+ NRKKCV AHSQI YLGH ISK GVEAD++K+  M+ WPKPKDVTGLRGFLGLTGYYRRFV+GYGEI+APLTK LQKN F W E AT 
Subjt:  MVFVILCDNQLFVNRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLRGFLGLTGYYRRFVRGYGEISAPLTKHLQKNVFYWSEEATK

Query:  AFENLKNAMVTIPVLALPDWPLPFIIETNASGVGLGAVLSKQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE
        AFE+LK+AM TIPVLALPDW LPF+IET+ASG GLGAVLS+  HPIAF +QKLS R QAKSIYERELM VVLSVQKWRHYLLGR+F ++SDQKALKFLLE
Subjt:  AFENLKNAMVTIPVLALPDWPLPFIIETNASGVGLGAVLSKQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE

Query:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSPELRLITTPGIMDLEVAMKEVEEDREVQQLIDNLKQHPEEASKYQWENERLLYKGRLV
        QREVQPQFQKWLTKLLGYDFEILYQP LQNK ADALS ++ S EL+ ++T GI+D+EV  KEVE+D E+Q LI  L+ +P    KY   N  L+YKGR+V
Subjt:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSPELRLITTPGIMDLEVAMKEVEEDREVQQLIDNLKQHPEEASKYQWENERLLYKGRLV

Query:  LSKQSTLIPNLLPTFHDSILGGHSGFL
        LSK S++IP+LL TFHDSILGGHSGFL
Subjt:  LSKQSTLIPNLLPTFHDSILGGHSGFL

A0A5D3BYA1 Ty3/gypsy retrotransposon protein1.0e-13474.31Show/hide
Query:  MVFVILCDNQLFVNRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLRGFLGLTGYYRRFVRGYGEISAPLTKHLQKNVFYWSEEATK
        MVF  L DNQL+ NRKKCV AHSQI YLGH ISK GVEAD++K+  M+ WPKPKDVTGLRGFLGLTGYYRRFV+GYGEI+APLTK LQKN F W E AT 
Subjt:  MVFVILCDNQLFVNRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLRGFLGLTGYYRRFVRGYGEISAPLTKHLQKNVFYWSEEATK

Query:  AFENLKNAMVTIPVLALPDWPLPFIIETNASGVGLGAVLSKQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE
        AFE+LK+AM TIPVLALPDW LPF+IET+ASG GLGAVLS+  HPIAF +QKLS R QAKSIYERELM VVLSVQKWRHYLLGR+F ++SDQKALKFLLE
Subjt:  AFENLKNAMVTIPVLALPDWPLPFIIETNASGVGLGAVLSKQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE

Query:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSPELRLITTPGIMDLEVAMKEVEEDREVQQLIDNLKQHPEEASKYQWENERLLYKGRLV
        QREVQPQFQKWLTKLLGYDFEILYQP LQNK ADALS ++ S EL+ ++T GI+D+EV  KEVE+D E+Q LI  L+ +P    KY   N  L+YKGR+V
Subjt:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSPELRLITTPGIMDLEVAMKEVEEDREVQQLIDNLKQHPEEASKYQWENERLLYKGRLV

Query:  LSKQSTLIPNLLPTFHDSILGGHSGFL
        LSK S++IP+LL TFHDSILGGHSGFL
Subjt:  LSKQSTLIPNLLPTFHDSILGGHSGFL

A0A5D3DWA9 Ty3/gypsy retrotransposon protein1.4e-13474.31Show/hide
Query:  MVFVILCDNQLFVNRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLRGFLGLTGYYRRFVRGYGEISAPLTKHLQKNVFYWSEEATK
        MVF  L DNQL+ NRKKCV AHSQI YLGH ISK GVEAD++K+  M+ WPKPKDVTGLRGFLGLTGYYRRFV+GYGEI+APLTK LQKN F W E AT 
Subjt:  MVFVILCDNQLFVNRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLRGFLGLTGYYRRFVRGYGEISAPLTKHLQKNVFYWSEEATK

Query:  AFENLKNAMVTIPVLALPDWPLPFIIETNASGVGLGAVLSKQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE
        AFE+LK+AM TIPVLALPDW LPF+IET+ASG GLGAVLS+  HPIAF +QKLS R QAKSIYERELM VVLSVQKWRHYLLGR+F ++SDQKALKFLLE
Subjt:  AFENLKNAMVTIPVLALPDWPLPFIIETNASGVGLGAVLSKQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE

Query:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSPELRLITTPGIMDLEVAMKEVEEDREVQQLIDNLKQHPEEASKYQWENERLLYKGRLV
        QREVQPQFQKWLTKLLGYDFEILYQP LQNK ADALS ++ S EL+ ++T GI+D+EV  KEVE+D E+Q LI  L+ +P    KY   N  L+YKGR+V
Subjt:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSPELRLITTPGIMDLEVAMKEVEEDREVQQLIDNLKQHPEEASKYQWENERLLYKGRLV

Query:  LSKQSTLIPNLLPTFHDSILGGHSGFL
        LSK S++IP+LL TFHDSILGGHSGFL
Subjt:  LSKQSTLIPNLLPTFHDSILGGHSGFL

A0A5D3DZK6 Ty3/gypsy retrotransposon protein1.4e-13474.31Show/hide
Query:  MVFVILCDNQLFVNRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLRGFLGLTGYYRRFVRGYGEISAPLTKHLQKNVFYWSEEATK
        MVF  L DNQL+ NRKKCV AHSQI YLGH ISK GVEAD++K+  M+ WPKPKDVTGLRGFLGLTGYYRRFV+GYGEI+APLTK LQKN F W E AT 
Subjt:  MVFVILCDNQLFVNRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLRGFLGLTGYYRRFVRGYGEISAPLTKHLQKNVFYWSEEATK

Query:  AFENLKNAMVTIPVLALPDWPLPFIIETNASGVGLGAVLSKQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE
        AFE+LK+AM TIPVLALPDW LPF+IET+ASG GLGAVLS+  HPIAF +QKLS R QAKSIYERELM VVLSVQKWRHYLLGR+F ++SDQKALKFLLE
Subjt:  AFENLKNAMVTIPVLALPDWPLPFIIETNASGVGLGAVLSKQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE

Query:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSPELRLITTPGIMDLEVAMKEVEEDREVQQLIDNLKQHPEEASKYQWENERLLYKGRLV
        QREVQPQFQKWLTKLLGYDFEILYQP LQNK ADALS ++ S EL+ ++T GI+D+EV  KEVE+D E+Q LI  L+ +P    KY   N  L+YKGR+V
Subjt:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSPELRLITTPGIMDLEVAMKEVEEDREVQQLIDNLKQHPEEASKYQWENERLLYKGRLV

Query:  LSKQSTLIPNLLPTFHDSILGGHSGFL
        LSK S++IP+LL TFHDSILGGHSGFL
Subjt:  LSKQSTLIPNLLPTFHDSILGGHSGFL

A0A5D3E325 Ty3/gypsy retrotransposon protein1.4e-13474.31Show/hide
Query:  MVFVILCDNQLFVNRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLRGFLGLTGYYRRFVRGYGEISAPLTKHLQKNVFYWSEEATK
        MVF  L DNQL+ NRKKCV AHSQI YLGH ISK GVEAD++K+  M+ WPKPKDVTGLRGFLGLTGYYRRFV+GYGEI+APLTK LQKN F W E AT 
Subjt:  MVFVILCDNQLFVNRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLRGFLGLTGYYRRFVRGYGEISAPLTKHLQKNVFYWSEEATK

Query:  AFENLKNAMVTIPVLALPDWPLPFIIETNASGVGLGAVLSKQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE
        AFE+LK+AM TIPVLALPDW LPF+IET+ASG GLGAVLS+  HPIAF +QKLS R QAKSIYERELM VVLSVQKWRHYLLGR+F ++SDQKALKFLLE
Subjt:  AFENLKNAMVTIPVLALPDWPLPFIIETNASGVGLGAVLSKQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE

Query:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSPELRLITTPGIMDLEVAMKEVEEDREVQQLIDNLKQHPEEASKYQWENERLLYKGRLV
        QREVQPQFQKWLTKLLGYDFEILYQP LQNK ADALS ++ S EL+ ++T GI+D+EV  KEVE+D E+Q LI  L+ +P    KY   N  L+YKGR+V
Subjt:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSPELRLITTPGIMDLEVAMKEVEEDREVQQLIDNLKQHPEEASKYQWENERLLYKGRLV

Query:  LSKQSTLIPNLLPTFHDSILGGHSGFL
        LSK S++IP+LL TFHDSILGGHSGFL
Subjt:  LSKQSTLIPNLLPTFHDSILGGHSGFL

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.62.4e-4036.4Show/hide
Query:  MVFVILCDNQLFVNRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLRGFLGLTGYYRRFVRGYGEISAPLTKHLQKN--VFYWSEEA
        +VF  L    L +   KC     +  +LGH ++  G++ + EKI  +  +P P     ++ FLGLTGYYR+F+  + +I+ P+TK L+KN  +   + E 
Subjt:  MVFVILCDNQLFVNRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLRGFLGLTGYYRRFVRGYGEISAPLTKHLQKN--VFYWSEEA

Query:  TKAFENLKNAMVTIPVLALPDWPLPFIIETNASGVGLGAVLSKQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFL
          AF+ LK  +   P+L +PD+   F + T+AS V LGAVLS+ GHP++++++ L+      S  E+EL+ +V + + +RHYLLGR F + SD + L +L
Subjt:  TKAFENLKNAMVTIPVLALPDWPLPFIIETNASGVGLGAVLSKQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFL

Query:  LEQREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALS
           ++   +  +W  KL  +DF+I Y    +N VADALS
Subjt:  LEQREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALS

P10401 Retrovirus-related Pol polyprotein from transposon gypsy4.9e-3332Show/hide
Query:  VFVILCDNQLFVNRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLRGFLGLTGYYRRFVRGYGEISAPLT-----------KHLQKN
        V   L D  + V+++K       ++YLG  +SK G ++D EK+  +  +P+P  V  +R FLGL  YYR F++ +  I+ P+T           KH+ K 
Subjt:  VFVILCDNQLFVNRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLRGFLGLTGYYRRFVRGYGEISAPLT-----------KHLQKN

Query:  V-FYWSEEATKAFENLKNAMVTIPV-LALPDWPLPFIIETNASGVGLGAVLSKQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLG-RKFI
        +   ++E    AF+ L+N + +  V L  PD+  PF + T+AS  G+GAVLS++G PI  +++ L    Q  +  EREL+ +V ++ K +++L G R+  
Subjt:  V-FYWSEEATKAFENLKNAMVTIPV-LALPDWPLPFIIETNASGVGLGAVLSKQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLG-RKFI

Query:  VISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALS
        + +D + L F +  R    + ++W + +  ++ ++ Y+P  +N VADALS
Subjt:  VISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALS

P20825 Retrovirus-related Pol polyprotein from transposon 2974.0e-4337.24Show/hide
Query:  MVFVILCDNQLFVNRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLRGFLGLTGYYRRFVRGYGEISAPLTKHLQKNVFYWSE--EA
        +VF  L D  L +   KC     +  +LGH ++  G++ +  K+  ++++P P     +R FLGLTGYYR+F+  Y +I+ P+T  L+K     ++  E 
Subjt:  MVFVILCDNQLFVNRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLRGFLGLTGYYRRFVRGYGEISAPLTKHLQKNVFYWSE--EA

Query:  TKAFENLKNAMVTIPVLALPDWPLPFIIETNASGVGLGAVLSKQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFL
         +AFE LK  ++  P+L LPD+   F++ T+AS + LGAVLS+ GHPI+F+++ L+      S  E+EL+ +V + + +RHYLLGR+F++ SD + L++L
Subjt:  TKAFENLKNAMVTIPVLALPDWPLPFIIETNASGVGLGAVLSKQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFL

Query:  LEQREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALS
           +E   + ++W  +L  Y F+I Y    +N VADALS
Subjt:  LEQREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALS

P92523 Uncharacterized mitochondrial protein AtMg008606.4e-3355.91Show/hide
Query:  MVFVILCDNQLFVNRKKCVIAHSQIQYLG--HWISKRGVEADEEKISVMMNWPKPKDVTGLRGFLGLTGYYRRFVRGYGEISAPLTKHLQKNVFYWSEEA
        MV  I   +Q + NRKKC     QI YLG  H IS  GV AD  K+  M+ WP+PK+ T LRGFLGLTGYYRRFV+ YG+I  PLT+ L+KN   W+E A
Subjt:  MVFVILCDNQLFVNRKKCVIAHSQIQYLG--HWISKRGVEADEEKISVMMNWPKPKDVTGLRGFLGLTGYYRRFVRGYGEISAPLTKHLQKNVFYWSEEA

Query:  TKAFENLKNAMVTIPVLALPDWPLPFI
          AF+ LK A+ T+PVLALPD  LPF+
Subjt:  TKAFENLKNAMVTIPVLALPDWPLPFI

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus4.2e-3231.01Show/hide
Query:  MVFVILCDNQLFVNRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLRGFLGLTGYYRRFVRGYGEISAP---LTKHLQKNV------
        +V   L    L VN +K     +Q+++LG+ ++  G++AD +K+  +   P P  V  L+ FLG+T YYR+F++ Y +++ P   LT+ L  N+      
Subjt:  MVFVILCDNQLFVNRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLRGFLGLTGYYRRFVRGYGEISAP---LTKHLQKNV------

Query:  ---FYWSEEATKAFENLKNAMVTIPVLALPDWPLPFIIETNASGVGLGAVLSK----QGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGR
               E A ++F +LK+ + +  +LA P +  PF + T+AS   +GAVLS+    +  PIA++++ L+   +  +  E+E++ ++ S+   R YL G 
Subjt:  ---FYWSEEATKAFENLKNAMVTIPVLALPDWPLPFIIETNASGVGLGAVLSK----QGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGR

Query:  KFI-VISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEP
          I V +D + L F L  R    + ++W  ++  Y+ E++Y+P   N VADALS + P
Subjt:  KFI-VISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEP

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein4.6e-3455.91Show/hide
Query:  MVFVILCDNQLFVNRKKCVIAHSQIQYLG--HWISKRGVEADEEKISVMMNWPKPKDVTGLRGFLGLTGYYRRFVRGYGEISAPLTKHLQKNVFYWSEEA
        MV  I   +Q + NRKKC     QI YLG  H IS  GV AD  K+  M+ WP+PK+ T LRGFLGLTGYYRRFV+ YG+I  PLT+ L+KN   W+E A
Subjt:  MVFVILCDNQLFVNRKKCVIAHSQIQYLG--HWISKRGVEADEEKISVMMNWPKPKDVTGLRGFLGLTGYYRRFVRGYGEISAPLTKHLQKNVFYWSEEA

Query:  TKAFENLKNAMVTIPVLALPDWPLPFI
          AF+ LK A+ T+PVLALPD  LPF+
Subjt:  TKAFENLKNAMVTIPVLALPDWPLPFI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTATTTGTTATCCTTTGTGATAACCAATTATTCGTCAATCGAAAGAAGTGTGTTATAGCCCACTCACAGATACAATATCTGGGCCACTGGATATCCAAAAGAGGAGT
AGAGGCAGATGAAGAAAAGATCAGTGTGATGATGAACTGGCCCAAACCGAAAGATGTTACTGGCTTGAGAGGATTCTTGGGATTAACTGGATACTATAGAAGGTTTGTGC
GTGGATATGGAGAAATTTCAGCACCCCTTACCAAACATTTACAAAAGAATGTGTTCTACTGGAGTGAGGAGGCCACAAAAGCTTTTGAAAATCTGAAAAATGCCATGGTA
ACCATCCCCGTTCTTGCCCTACCTGACTGGCCTCTTCCATTCATAATCGAAACCAATGCTTCCGGCGTTGGATTAGGAGCAGTTCTTTCAAAACAGGGCCACCCTATTGC
TTTTTTAAATCAGAAGTTATCCCCACGGACTCAAGCCAAATCTATTTACGAGAGAGAACTAATGGTTGTGGTACTTTCGGTCCAAAAATGGAGACACTATCTTTTAGGAA
GGAAATTCATTGTAATATCTGATCAGAAAGCTCTTAAATTTCTTTTGGAACAAAGAGAGGTCCAGCCTCAATTCCAAAAATGGCTTACCAAACTTCTGGGGTATGATTTT
GAAATCCTTTACCAACCGAGCTTACAAAATAAAGTCGCAGATGCCCTCTCCATACTAGAACCAAGCCCTGAGTTGAGACTAATAACAACACCTGGGATTATGGACTTAGA
AGTGGCCATGAAAGAGGTTGAAGAAGACAGAGAGGTACAGCAGTTGATTGATAATCTAAAGCAACACCCTGAGGAAGCTAGCAAATACCAATGGGAGAATGAAAGATTAC
TATATAAAGGAAGACTCGTCCTCTCCAAGCAGTCAACTTTGATTCCCAACTTGCTACCCACCTTCCACGATTCCATTCTTGGAGGCCATTCAGGGTTCTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTATTTGTTATCCTTTGTGATAACCAATTATTCGTCAATCGAAAGAAGTGTGTTATAGCCCACTCACAGATACAATATCTGGGCCACTGGATATCCAAAAGAGGAGT
AGAGGCAGATGAAGAAAAGATCAGTGTGATGATGAACTGGCCCAAACCGAAAGATGTTACTGGCTTGAGAGGATTCTTGGGATTAACTGGATACTATAGAAGGTTTGTGC
GTGGATATGGAGAAATTTCAGCACCCCTTACCAAACATTTACAAAAGAATGTGTTCTACTGGAGTGAGGAGGCCACAAAAGCTTTTGAAAATCTGAAAAATGCCATGGTA
ACCATCCCCGTTCTTGCCCTACCTGACTGGCCTCTTCCATTCATAATCGAAACCAATGCTTCCGGCGTTGGATTAGGAGCAGTTCTTTCAAAACAGGGCCACCCTATTGC
TTTTTTAAATCAGAAGTTATCCCCACGGACTCAAGCCAAATCTATTTACGAGAGAGAACTAATGGTTGTGGTACTTTCGGTCCAAAAATGGAGACACTATCTTTTAGGAA
GGAAATTCATTGTAATATCTGATCAGAAAGCTCTTAAATTTCTTTTGGAACAAAGAGAGGTCCAGCCTCAATTCCAAAAATGGCTTACCAAACTTCTGGGGTATGATTTT
GAAATCCTTTACCAACCGAGCTTACAAAATAAAGTCGCAGATGCCCTCTCCATACTAGAACCAAGCCCTGAGTTGAGACTAATAACAACACCTGGGATTATGGACTTAGA
AGTGGCCATGAAAGAGGTTGAAGAAGACAGAGAGGTACAGCAGTTGATTGATAATCTAAAGCAACACCCTGAGGAAGCTAGCAAATACCAATGGGAGAATGAAAGATTAC
TATATAAAGGAAGACTCGTCCTCTCCAAGCAGTCAACTTTGATTCCCAACTTGCTACCCACCTTCCACGATTCCATTCTTGGAGGCCATTCAGGGTTCTTATGA
Protein sequenceShow/hide protein sequence
MVFVILCDNQLFVNRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLRGFLGLTGYYRRFVRGYGEISAPLTKHLQKNVFYWSEEATKAFENLKNAMV
TIPVLALPDWPLPFIIETNASGVGLGAVLSKQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLEQREVQPQFQKWLTKLLGYDF
EILYQPSLQNKVADALSILEPSPELRLITTPGIMDLEVAMKEVEEDREVQQLIDNLKQHPEEASKYQWENERLLYKGRLVLSKQSTLIPNLLPTFHDSILGGHSGFL