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PI0026381 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026381
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionauxin-regulated gene involved in organ size
Genome locationchr08:5625806..5626611
RNA-Seq ExpressionPI0026381
SyntenyPI0026381
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN54720.1 hypothetical protein Csa_012521 [Cucumis sativus]5.1e-3881.45Show/hide
Query:  MYTKPVSLTTISTSFCYKNSPPPPSSVADATATTRLPPSPS----------LLLSPATFPFLMVRYSNMFLLFLWTLSLLVLPLLLPPLPPPPMVLLFVP
        MYTKPVS TTISTSFCYKNSPPPPSS  DAT  TRLPPS S          L L+ ATFPFLM RYSNMFLLFLWTLSLLVLPLLLPPLPPPPMV LFVP
Subjt:  MYTKPVSLTTISTSFCYKNSPPPPSSVADATATTRLPPSPS----------LLLSPATFPFLMVRYSNMFLLFLWTLSLLVLPLLLPPLPPPPMVLLFVP

Query:  LVIMMLLIFFALSTSQLPTTIVAS
        LVIMMLLIFFALSTSQ+PTT VAS
Subjt:  LVIMMLLIFFALSTSQLPTTIVAS
TrEMBL top hitse value%identityAlignment
A0A0A0KYG7 Uncharacterized protein2.5e-3881.45Show/hide
Query:  MYTKPVSLTTISTSFCYKNSPPPPSSVADATATTRLPPSPS----------LLLSPATFPFLMVRYSNMFLLFLWTLSLLVLPLLLPPLPPPPMVLLFVP
        MYTKPVS TTISTSFCYKNSPPPPSS  DAT  TRLPPS S          L L+ ATFPFLM RYSNMFLLFLWTLSLLVLPLLLPPLPPPPMV LFVP
Subjt:  MYTKPVSLTTISTSFCYKNSPPPPSSVADATATTRLPPSPS----------LLLSPATFPFLMVRYSNMFLLFLWTLSLLVLPLLLPPLPPPPMVLLFVP

Query:  LVIMMLLIFFALSTSQLPTTIVAS
        LVIMMLLIFFALSTSQ+PTT VAS
Subjt:  LVIMMLLIFFALSTSQLPTTIVAS
A0A1J6HXM3 Uncharacterized protein6.8e-0453.7Show/hide
Query:  MFLLFLWTLSLLVLPLLLPPLPPPPMVLLFVPLVIMMLLIFFALSTSQLPTTIV
        +F++   T+SLLVLPL+LPPLPPPP++ LF+P+++M+LL+F A + SQLP   +
Subjt:  MFLLFLWTLSLLVLPLLLPPLPPPPMVLLFVPLVIMMLLIFFALSTSQLPTTIV
A0A2N9F7M5 Uncharacterized protein2.3e-0461.82Show/hide
Query:  VRYSNMFLLFLWTLSLLVLPLLLPPLPPPPMVLLFVPLVIMMLLIFFALSTSQLP
        VR+  + LL   T+SLLVLPL+LPPLPPPP++LLFVP+++M LL+F AL+ SQ+P
Subjt:  VRYSNMFLLFLWTLSLLVLPLLLPPLPPPPMVLLFVPLVIMMLLIFFALSTSQLP
A0A5D1ZT36 Uncharacterized protein6.8e-0455.74Show/hide
Query:  VRYSNMFLLFLWTLSLLVLPLLLPPLPPPPMVLLFVPLVIMMLLIFFALSTSQLPTTIVAS
        +R+  + ++     SLLVLPLLLP LPPPP +LLFVP++IM+LL+F ALS SQ PT I  +
Subjt:  VRYSNMFLLFLWTLSLLVLPLLLPPLPPPPMVLLFVPLVIMMLLIFFALSTSQLPTTIVAS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G41230.1 unknown protein3.0e-0454.1Show/hide
Query:  LMVRYSNMFLLFLWTLSLLVLPLLLPPLPPPPMVLLFVPLVIMMLLIFFALSTSQLPTTIV
        L+   S   LLFL +L LL+LP  LPPLPPPP  LL +PL++M+LLIF A S S  P+  V
Subjt:  LMVRYSNMFLLFLWTLSLLVLPLLLPPLPPPPMVLLFVPLVIMMLLIFFALSTSQLPTTIV
AT3G59900.1 auxin-regulated gene involved in organ size3.0e-0458.33Show/hide
Query:  NMFLLFLWTLSLLVLPLLLPPLPPPPMVLLFVPLVIMMLLIFFALSTS
        ++FLL   T SLL+LPL+LPPLPPPP +LL VP+ IM+LL+  A   S
Subjt:  NMFLLFLWTLSLLVLPLLLPPLPPPPMVLLFVPLVIMMLLIFFALSTS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATACAAAACCTGTCTCTTTAACCACCATCTCCACCTCTTTTTGCTACAAAAATTCCCCTCCTCCGCCCTCATCAGTCGCCGATGCCACCGCGACAACTCGTTTGCC
TCCTTCCCCATCGTTACTCCTCTCACCGGCTACTTTTCCTTTCTTGATGGTCCGCTACTCCAACATGTTTTTGTTGTTTCTTTGGACACTATCCCTTTTGGTTCTACCTC
TACTTCTTCCGCCGCTCCCGCCGCCGCCCATGGTGCTTCTCTTTGTGCCTCTCGTTATCATGATGCTTCTTATCTTCTTTGCCTTGTCGACTTCTCAACTTCCAACCACT
ATAGTAGCGTCTGAAAGTTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATACAAAACCTGTCTCTTTAACCACCATCTCCACCTCTTTTTGCTACAAAAATTCCCCTCCTCCGCCCTCATCAGTCGCCGATGCCACCGCGACAACTCGTTTGCC
TCCTTCCCCATCGTTACTCCTCTCACCGGCTACTTTTCCTTTCTTGATGGTCCGCTACTCCAACATGTTTTTGTTGTTTCTTTGGACACTATCCCTTTTGGTTCTACCTC
TACTTCTTCCGCCGCTCCCGCCGCCGCCCATGGTGCTTCTCTTTGTGCCTCTCGTTATCATGATGCTTCTTATCTTCTTTGCCTTGTCGACTTCTCAACTTCCAACCACT
ATAGTAGCGTCTGAAAGTTGTTGACGCATTTTTGTATAGTACAACACAGGTCCTCTTCTATACTCTTTACGATGATATGATATGGTTTGCTTTAGATCTGGTCTCTCATG
ATTTTGCGTCGTACAATGAAAATGTATCTAAGTGGATCTCTTTTCATTTATTCTTGCCGTCTTATGAAGACTATGACTATGTTCATATCTCGACCAATTCGGTAATATCG
ATTTAAATTTTGTGATCTTGGTTGAATAGATGTCCTTTTCTTGGATTTTCCAGGACTTGAAGAAGAAGAAAAGGAAATAATGAGGAAAAGAATAATGGGTGATTTTTGGA
AGGAAAAGAGAATTGGGTTTTGTATTTTGT
Protein sequenceShow/hide protein sequence
MYTKPVSLTTISTSFCYKNSPPPPSSVADATATTRLPPSPSLLLSPATFPFLMVRYSNMFLLFLWTLSLLVLPLLLPPLPPPPMVLLFVPLVIMMLLIFFALSTSQLPTT
IVASESC