; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0026447 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026447
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionglycine-rich RNA-binding protein 2-like
Genome locationchr01:2259014..2259781
RNA-Seq ExpressionPI0026447
SyntenyPI0026447
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608571.1 hypothetical protein SDJN03_01913, partial [Cucurbita argyrosperma subsp. sororia]3.8e-5475.54Show/hide
Query:  LVILATVIYGSRAAEALGNGSMPINVTFLTFSELPQRNAGERRNNASNTTTVEVSKRNGGGGGGGYGWGWGSGGGGGGGGGGGGGGGGGGGGGWGWGGGG
        LV     +YGSR AE L NG      TFLTFSELP+ NAGE RN++ NTTTVEVSK+N  GGGGGYGWGW   GGGGGGGGGGGGGGGGGGGGWGWGGGG
Subjt:  LVILATVIYGSRAAEALGNGSMPINVTFLTFSELPQRNAGERRNNASNTTTVEVSKRNGGGGGGGYGWGWGSGGGGGGGGGGGGGGGGGGGGGWGWGGGG

Query:  GGWWKWGCGGQPKSERVGQRDDNGRSKNVKRKKMYNDKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCLYDCQYMCKAHCIRR
        GGWWKWGCGGQPKS R G     GR KNV RK++YN++DY MGEFA+CMVKGRCRGMRLDCPLHCGGPC YDC+YMCKAHC RR
Subjt:  GGWWKWGCGGQPKSERVGQRDDNGRSKNVKRKKMYNDKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCLYDCQYMCKAHCIRR

KAG7037889.1 hypothetical protein SDJN02_01520, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-5375Show/hide
Query:  VILATVIYGSRAAEALGNGSMPINVTFLTFSELPQRNAGERRNNASNTTTVEVSKRNGGGGGG-GYGWGWGSGGGGGGGGGGGGGGGGGGGGGWGWGGGG
        +     +YGSR AE L NG      TFLTFSELP+ NAGE RN++ NTTTVEVSK+N GGGGG G+GWG G GGGGGGGGGGGGGGGGGGGGGWGWGGGG
Subjt:  VILATVIYGSRAAEALGNGSMPINVTFLTFSELPQRNAGERRNNASNTTTVEVSKRNGGGGGG-GYGWGWGSGGGGGGGGGGGGGGGGGGGGGWGWGGGG

Query:  GGWWKWGCGGQPKSERVGQRDDNGRSKNVKRKKMYNDKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCLYDCQYMCKAHCIRR
        GGWWKWGCGGQPKS R G     GR KNV RK++YN++DY MGEFA+CMVKGRCRGMRLDCPLHCGGPC YDC+YMCKAHC RR
Subjt:  GGWWKWGCGGQPKSERVGQRDDNGRSKNVKRKKMYNDKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCLYDCQYMCKAHCIRR

XP_008455258.1 PREDICTED: keratin, type II cytoskeletal 1 [Cucumis melo]2.1e-8491.37Show/hide
Query:  MGWENPIKLSALVILATVIYGSRAAEALGNGSMPINVTFLTFSELPQRNAGERRNNASNTTTVEVSKRN-GGGGGGGYGWGWGSGGGGGGGGGGGGGGGG
        MGWENPIKLSALVILATVIYGSRAAE LGNGSMPINVTFLTFSELPQRNAGERRN++SNT+TVEVSK+N GGGGGGGYGWGWGS GGGGGGGGGGGGGGG
Subjt:  MGWENPIKLSALVILATVIYGSRAAEALGNGSMPINVTFLTFSELPQRNAGERRNNASNTTTVEVSKRN-GGGGGGGYGWGWGSGGGGGGGGGGGGGGGG

Query:  GGGGGWGWGGGGGGWWKWGCGGQPKSERVGQRDDNGRSKNVKRKKMYNDKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCLYDCQYMCKAHCIRRP
        GGGGGWGWGGGGGGWWKWGCGG+PK E+VG+RDDNGR KNVKRKKMYN+KDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPC YDC+YMCKAHC R P
Subjt:  GGGGGWGWGGGGGGWWKWGCGGQPKSERVGQRDDNGRSKNVKRKKMYNDKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCLYDCQYMCKAHCIRRP

XP_011659711.1 keratin, type II cytoskeletal 2 epidermal [Cucumis sativus]1.8e-8389.29Show/hide
Query:  MGWENPIKLSALVILATVIYGSRAAEALGNGSMPINVTFLTFSELPQRNAGERRNNASNTTTVEVSKRNGGGGGGGYGWGWGSGGGGGGGGGGGGGGGGG
        MGWENPIKLSALVILATVI GSRAAE LGNGSMP+NVTFLTFSELPQRNAGERRN++SN+TTVEVSK+NGGGGGGGYGWGWGS    GGGGGGGGGGGGG
Subjt:  MGWENPIKLSALVILATVIYGSRAAEALGNGSMPINVTFLTFSELPQRNAGERRNNASNTTTVEVSKRNGGGGGGGYGWGWGSGGGGGGGGGGGGGGGGG

Query:  GGGGWGWGGGGGGWWKWGCGGQPKSERVGQRDDNGRSKNVKRKKMYNDKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCLYDCQYMCKAHCIRRP
        GGGGWGWGGGGGGWWKWGCGGQPKSERVG+RDDNG S+NVK K+MY++KDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPC YDC+YMCKAHC RRP
Subjt:  GGGGWGWGGGGGGWWKWGCGGQPKSERVGQRDDNGRSKNVKRKKMYNDKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCLYDCQYMCKAHCIRRP

XP_022940700.1 glycine-rich RNA-binding protein 2-like [Cucurbita moschata]1.8e-5168.5Show/hide
Query:  MGWENPIKLSALVILATV------IYGSRAAEALGNGSMPINVTFLTFSELPQRNAGERRNNASNTTTVEVSKRNGGGGGGGYGWGWGSGGGGGGGGGGG
        +G +N  ++ A+  +  V      +YGSR AE L NG      TFLTFSELP  NAGE RN++ NTTTVEVSK+N  GGGGGYGWGW    GGGGGGGGG
Subjt:  MGWENPIKLSALVILATV------IYGSRAAEALGNGSMPINVTFLTFSELPQRNAGERRNNASNTTTVEVSKRNGGGGGGGYGWGWGSGGGGGGGGGGG

Query:  GGGGGGGGGGWGWGGGGGGWWKWGCGGQPKSERVGQRDDNGRSKNVKRKKMYNDKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCLYDCQYMCKAHCIR
        GGGGGGGGGGWGWGGGGGGWWKWGCGGQPKS R G     GR KNV RK++YN++DY +GEFA+CMVKGRCRGMRLDCPLHCGGPC YDC++MCKAHC R
Subjt:  GGGGGGGGGGWGWGGGGGGWWKWGCGGQPKSERVGQRDDNGRSKNVKRKKMYNDKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCLYDCQYMCKAHCIR

TrEMBL top hitse value%identityAlignment
A0A0A0K766 Uncharacterized protein8.5e-8489.29Show/hide
Query:  MGWENPIKLSALVILATVIYGSRAAEALGNGSMPINVTFLTFSELPQRNAGERRNNASNTTTVEVSKRNGGGGGGGYGWGWGSGGGGGGGGGGGGGGGGG
        MGWENPIKLSALVILATVI GSRAAE LGNGSMP+NVTFLTFSELPQRNAGERRN++SN+TTVEVSK+NGGGGGGGYGWGWGS    GGGGGGGGGGGGG
Subjt:  MGWENPIKLSALVILATVIYGSRAAEALGNGSMPINVTFLTFSELPQRNAGERRNNASNTTTVEVSKRNGGGGGGGYGWGWGSGGGGGGGGGGGGGGGGG

Query:  GGGGWGWGGGGGGWWKWGCGGQPKSERVGQRDDNGRSKNVKRKKMYNDKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCLYDCQYMCKAHCIRRP
        GGGGWGWGGGGGGWWKWGCGGQPKSERVG+RDDNG S+NVK K+MY++KDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPC YDC+YMCKAHC RRP
Subjt:  GGGGWGWGGGGGGWWKWGCGGQPKSERVGQRDDNGRSKNVKRKKMYNDKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCLYDCQYMCKAHCIRRP

A0A1S3C029 keratin, type II cytoskeletal 11.0e-8491.37Show/hide
Query:  MGWENPIKLSALVILATVIYGSRAAEALGNGSMPINVTFLTFSELPQRNAGERRNNASNTTTVEVSKRN-GGGGGGGYGWGWGSGGGGGGGGGGGGGGGG
        MGWENPIKLSALVILATVIYGSRAAE LGNGSMPINVTFLTFSELPQRNAGERRN++SNT+TVEVSK+N GGGGGGGYGWGWGS GGGGGGGGGGGGGGG
Subjt:  MGWENPIKLSALVILATVIYGSRAAEALGNGSMPINVTFLTFSELPQRNAGERRNNASNTTTVEVSKRN-GGGGGGGYGWGWGSGGGGGGGGGGGGGGGG

Query:  GGGGGWGWGGGGGGWWKWGCGGQPKSERVGQRDDNGRSKNVKRKKMYNDKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCLYDCQYMCKAHCIRRP
        GGGGGWGWGGGGGGWWKWGCGG+PK E+VG+RDDNGR KNVKRKKMYN+KDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPC YDC+YMCKAHC R P
Subjt:  GGGGGWGWGGGGGGWWKWGCGGQPKSERVGQRDDNGRSKNVKRKKMYNDKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCLYDCQYMCKAHCIRRP

A0A6J1FRC8 glycine-rich RNA-binding protein 2-like8.6e-5268.5Show/hide
Query:  MGWENPIKLSALVILATV------IYGSRAAEALGNGSMPINVTFLTFSELPQRNAGERRNNASNTTTVEVSKRNGGGGGGGYGWGWGSGGGGGGGGGGG
        +G +N  ++ A+  +  V      +YGSR AE L NG      TFLTFSELP  NAGE RN++ NTTTVEVSK+N  GGGGGYGWGW    GGGGGGGGG
Subjt:  MGWENPIKLSALVILATV------IYGSRAAEALGNGSMPINVTFLTFSELPQRNAGERRNNASNTTTVEVSKRNGGGGGGGYGWGWGSGGGGGGGGGGG

Query:  GGGGGGGGGGWGWGGGGGGWWKWGCGGQPKSERVGQRDDNGRSKNVKRKKMYNDKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCLYDCQYMCKAHCIR
        GGGGGGGGGGWGWGGGGGGWWKWGCGGQPKS R G     GR KNV RK++YN++DY +GEFA+CMVKGRCRGMRLDCPLHCGGPC YDC++MCKAHC R
Subjt:  GGGGGGGGGGWGWGGGGGGWWKWGCGGQPKSERVGQRDDNGRSKNVKRKKMYNDKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCLYDCQYMCKAHCIR

A0A6P5TWS0 glycine-rich protein 2-like8.3e-3159.2Show/hide
Query:  SELPQRNAGERRNNA--SNTTTVEVSKRN--------------GGGGGGGYGWGWGSGGGGGGGG---GGGGGGGGGGGGGWGWGGGGG--GWWKWGCGG
        +E+P    G+ RN    SNT  V ++ +N              GGGGGGGY WGWG GGGGGGGG   GGGGGGGGGGGGGWGWGGGGG  GWWKWGCGG
Subjt:  SELPQRNAGERRNNA--SNTTTVEVSKRN--------------GGGGGGGYGWGWGSGGGGGGGG---GGGGGGGGGGGGGWGWGGGGG--GWWKWGCGG

Query:  QPKSERVGQRDDNGRSKNVKRKKMYNDKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCLYDCQYMCKAHCIRR
                     G+ +  +RK+ +++ DY +GEFAQCM KGRC+GMRLDCPLHCGGPC YDCQYMCKAHC RR
Subjt:  QPKSERVGQRDDNGRSKNVKRKKMYNDKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCLYDCQYMCKAHCIRR

A0A7J6EKQ5 Uncharacterized protein6.4e-3154.21Show/hide
Query:  MGWENPIKLSALVILATVIYGSRAAEALGNG---SMPINVTFLTFSELPQRNAGERRNNASNTTTV-EVSKRN------------GGGGGGGYGWGWGSG
        MG  +PI +  L+I + VI G +     GNG           L  +E+P+ N   + N+  +   V +V+KRN            GGGGGG Y WGWG G
Subjt:  MGWENPIKLSALVILATVIYGSRAAEALGNG---SMPINVTFLTFSELPQRNAGERRNNASNTTTV-EVSKRN------------GGGGGGGYGWGWGSG

Query:  GGGGGGGGGGGGGGGGGGGGWGWGGGGG--GWWKWGCGGQPKSERVGQRDDNGRSKNVKRKKMYNDKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCLY
        GGGGGGGGGGGGGGGGGGGGWGWGGGGG  GWWKWGCG          R +N  +K+ KR +     +Y MGEFAQCM +GRCRGMRLDCPLHCGGPC Y
Subjt:  GGGGGGGGGGGGGGGGGGGGWGWGGGGG--GWWKWGCGGQPKSERVGQRDDNGRSKNVKRKKMYNDKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCLY

Query:  DCQYMCKAHCIRRP
        DCQYMCKAHC RRP
Subjt:  DCQYMCKAHCIRRP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G75550.1 glycine-rich protein1.0e-2055.03Show/hide
Query:  ERRNNASNTTTVEV----SKRNGGGGGGGYGWGWGSGGGGGGGGGGGGGGGGGGGGGWGW--GGGGGGWWKWGCGGQPKSERVGQRDDNGRSKNVKRKKM
        +  NN  N+TT  V     KR+  GG G Y WGWG GGGGGGGGGGGGGGGGGGGGGWGW  GGGGGGW+KWGCGG  K      +   GR + VKR   
Subjt:  ERRNNASNTTTVEV----SKRNGGGGGGGYGWGWGSGGGGGGGGGGGGGGGGGGGGGWGW--GGGGGGWWKWGCGGQPKSERVGQRDDNGRSKNVKRKKM

Query:  YNDKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCLYDCQYMCKAHCIR
                 E+A+C  +G+C G RL+CP HCGG C YDC ++CK HC R
Subjt:  YNDKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCLYDCQYMCKAHCIR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTGGGAAAATCCAATCAAATTAAGTGCTTTGGTGATTTTAGCAACAGTGATTTATGGGTCAAGAGCTGCTGAAGCTTTAGGAAATGGAAGTATGCCCATAAATGT
AACTTTCTTAACATTCTCAGAGCTGCCACAGAGGAATGCAGGGGAGAGGAGAAACAATGCTAGCAATACTACTACAGTAGAGGTCAGCAAGCGGAACGGGGGAGGCGGTG
GCGGTGGCTATGGATGGGGATGGGGCAGCGGTGGTGGTGGAGGAGGTGGAGGTGGAGGTGGAGGTGGAGGTGGAGGTGGAGGTGGTGGAGGATGGGGATGGGGAGGAGGT
GGAGGTGGGTGGTGGAAATGGGGTTGTGGAGGACAGCCAAAATCCGAGAGAGTTGGACAACGCGATGATAACGGACGAAGCAAAAATGTGAAGAGAAAGAAAATGTACAA
CGACAAAGATTACAGAATGGGAGAATTTGCTCAATGTATGGTGAAAGGAAGATGCAGAGGAATGAGATTAGATTGTCCACTCCACTGCGGCGGACCTTGCCTTTATGATT
GTCAATACATGTGTAAAGCTCATTGCATTCGACGTCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGTGGGAAAATCCAATCAAATTAAGTGCTTTGGTGATTTTAGCAACAGTGATTTATGGGTCAAGAGCTGCTGAAGCTTTAGGAAATGGAAGTATGCCCATAAATGT
AACTTTCTTAACATTCTCAGAGCTGCCACAGAGGAATGCAGGGGAGAGGAGAAACAATGCTAGCAATACTACTACAGTAGAGGTCAGCAAGCGGAACGGGGGAGGCGGTG
GCGGTGGCTATGGATGGGGATGGGGCAGCGGTGGTGGTGGAGGAGGTGGAGGTGGAGGTGGAGGTGGAGGTGGAGGTGGAGGTGGTGGAGGATGGGGATGGGGAGGAGGT
GGAGGTGGGTGGTGGAAATGGGGTTGTGGAGGACAGCCAAAATCCGAGAGAGTTGGACAACGCGATGATAACGGACGAAGCAAAAATGTGAAGAGAAAGAAAATGTACAA
CGACAAAGATTACAGAATGGGAGAATTTGCTCAATGTATGGTGAAAGGAAGATGCAGAGGAATGAGATTAGATTGTCCACTCCACTGCGGCGGACCTTGCCTTTATGATT
GTCAATACATGTGTAAAGCTCATTGCATTCGACGTCCTTAGTTTTCTAAAAAGGGTGCAATACGAGGACTTTCTAGGTGGTCACCGAACTTAGTATTACTCTGATCCAAG
CATGTTTAACTAACAAAATGTACATTAGTACCGGTATGATTGTACCCTCGACGCTCCTAATTTGCATTGTCAGCCATAACTTCTATGATAATCGTTCTTAGACTTGAC
Protein sequenceShow/hide protein sequence
MGWENPIKLSALVILATVIYGSRAAEALGNGSMPINVTFLTFSELPQRNAGERRNNASNTTTVEVSKRNGGGGGGGYGWGWGSGGGGGGGGGGGGGGGGGGGGGWGWGGG
GGGWWKWGCGGQPKSERVGQRDDNGRSKNVKRKKMYNDKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCLYDCQYMCKAHCIRRP