; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0026460 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026460
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionNET domain-containing protein
Genome locationchr06:19882293..19889098
RNA-Seq ExpressionPI0026460
SyntenyPI0026460
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037843.1 uncharacterized protein E6C27_scaffold113G00300 [Cucumis melo var. makuwa]1.5e-4191.75Show/hide
Query:  MSNHQSDTTDQDKFGPDTFCYFKREVIDLLSQEDNVPSPPHNSRISGASPPFSDCIGPKLSHFRKEKLKTLLRQSVVTLSKEVNEMFEPARSTQRLK
        MSNHQSDT DQDKFGPDTF  FKREVIDLLSQEDNVPSPP NS+ SGASPPFSDCIGPKLSHF+KEKLKTLLRQSVVTLSKEVNEMFEPARSTQ LK
Subjt:  MSNHQSDTTDQDKFGPDTFCYFKREVIDLLSQEDNVPSPPHNSRISGASPPFSDCIGPKLSHFRKEKLKTLLRQSVVTLSKEVNEMFEPARSTQRLK

XP_008450000.1 PREDICTED: uncharacterized protein LOC103491717 [Cucumis melo]1.4e-4292.78Show/hide
Query:  MSNHQSDTTDQDKFGPDTFCYFKREVIDLLSQEDNVPSPPHNSRISGASPPFSDCIGPKLSHFRKEKLKTLLRQSVVTLSKEVNEMFEPARSTQRLK
        MSNHQSDT DQDKFGPDTF YFKREVIDLLSQEDNVPSPP NS+ SGASPPFSDCIGPKLSHF+KEKLKTLLRQSVVTLSKEVNEMFEPARSTQ LK
Subjt:  MSNHQSDTTDQDKFGPDTFCYFKREVIDLLSQEDNVPSPPHNSRISGASPPFSDCIGPKLSHFRKEKLKTLLRQSVVTLSKEVNEMFEPARSTQRLK

XP_011651583.1 uncharacterized protein LOC101211269 isoform X1 [Cucumis sativus]7.3e-4493.81Show/hide
Query:  MSNHQSDTTDQDKFGPDTFCYFKREVIDLLSQEDNVPSPPHNSRISGASPPFSDCIGPKLSHFRKEKLKTLLRQSVVTLSKEVNEMFEPARSTQRLK
        MSNHQSDT DQDK  PDTFCYFKREVIDLLSQEDNVPSPPHNS+ISGASPPFSDCIGPKLSHF+KEKLKTLLRQSVVTLSKEVNEM EPARSTQRLK
Subjt:  MSNHQSDTTDQDKFGPDTFCYFKREVIDLLSQEDNVPSPPHNSRISGASPPFSDCIGPKLSHFRKEKLKTLLRQSVVTLSKEVNEMFEPARSTQRLK

XP_038893520.1 uncharacterized protein LOC120082425 isoform X1 [Benincasa hispida]1.5e-3682.47Show/hide
Query:  MSNHQSDTTDQDKFGPDTFCYFKREVIDLLSQEDNVPSPPHNSRISGASPPFSDCIGPKLSHFRKEKLKTLLRQSVVTLSKEVNEMFEPARSTQRLK
        MS HQSDT DQDK GPDTF YFKREVIDLLSQEDN+PSPPH+S+ISGASPPF D IGP LSHF+KEKLKTLLRQSV  LSKEVNEM +PA STQ LK
Subjt:  MSNHQSDTTDQDKFGPDTFCYFKREVIDLLSQEDNVPSPPHNSRISGASPPFSDCIGPKLSHFRKEKLKTLLRQSVVTLSKEVNEMFEPARSTQRLK

XP_038893528.1 uncharacterized protein LOC120082425 isoform X2 [Benincasa hispida]1.5e-3682.47Show/hide
Query:  MSNHQSDTTDQDKFGPDTFCYFKREVIDLLSQEDNVPSPPHNSRISGASPPFSDCIGPKLSHFRKEKLKTLLRQSVVTLSKEVNEMFEPARSTQRLK
        MS HQSDT DQDK GPDTF YFKREVIDLLSQEDN+PSPPH+S+ISGASPPF D IGP LSHF+KEKLKTLLRQSV  LSKEVNEM +PA STQ LK
Subjt:  MSNHQSDTTDQDKFGPDTFCYFKREVIDLLSQEDNVPSPPHNSRISGASPPFSDCIGPKLSHFRKEKLKTLLRQSVVTLSKEVNEMFEPARSTQRLK

TrEMBL top hitse value%identityAlignment
A0A0A0L8R5 Uncharacterized protein2.6e-3992.22Show/hide
Query:  TTDQDKFGPDTFCYFKREVIDLLSQEDNVPSPPHNSRISGASPPFSDCIGPKLSHFRKEKLKTLLRQSVVTLSKEVNEMFEPARSTQRLK
        + DQDK  PDTFCYFKREVIDLLSQEDNVPSPPHNS+ISGASPPFSDCIGPKLSHF+KEKLKTLLRQSVVTLSKEVNEM EPARSTQRLK
Subjt:  TTDQDKFGPDTFCYFKREVIDLLSQEDNVPSPPHNSRISGASPPFSDCIGPKLSHFRKEKLKTLLRQSVVTLSKEVNEMFEPARSTQRLK

A0A1S3BNY6 uncharacterized protein LOC1034917176.7e-4392.78Show/hide
Query:  MSNHQSDTTDQDKFGPDTFCYFKREVIDLLSQEDNVPSPPHNSRISGASPPFSDCIGPKLSHFRKEKLKTLLRQSVVTLSKEVNEMFEPARSTQRLK
        MSNHQSDT DQDKFGPDTF YFKREVIDLLSQEDNVPSPP NS+ SGASPPFSDCIGPKLSHF+KEKLKTLLRQSVVTLSKEVNEMFEPARSTQ LK
Subjt:  MSNHQSDTTDQDKFGPDTFCYFKREVIDLLSQEDNVPSPPHNSRISGASPPFSDCIGPKLSHFRKEKLKTLLRQSVVTLSKEVNEMFEPARSTQRLK

A0A5D3C3X9 Reverse transcriptase1.4e-3244.04Show/hide
Query:  LRARTNLAENEHHLIARFVGGLRMDIKEKVKFQVFHFLADAIAFTEVVEELNGIRSKNAARKATCEASTSRRINFSSKNKDFVHQSATNKSKEVEKDNQE
        L AR NL+ENE H IARF+GGLR DIKEK+K Q F FL++AI+F E VEE+N IR+KN +                         S   K KEVE   Q+
Subjt:  LRARTNLAENEHHLIARFVGGLRMDIKEKVKFQVFHFLADAIAFTEVVEELNGIRSKNAARKATCEASTSRRINFSSKNKDFVHQSATNKSKEVEKDNQE

Query:  AMMEKKTEANGKKKEQNPYVRSFKGVCYRCGQTRHPSNTCPQHKTVAFIDEEDEDSIKNIEESEEEAKMIEPNDGDRFSSLWCCI--VMSNHQSDTTDQD
           +KK E   K K QN Y R   G C+RCGQ  HPSNTCPQ KT+A  D+E++ + ++ EE EEEAK+IE +DG R S   C I  V+   + +T  Q 
Subjt:  AMMEKKTEANGKKKEQNPYVRSFKGVCYRCGQTRHPSNTCPQHKTVAFIDEEDEDSIKNIEESEEEAKMIEPNDGDRFSSLWCCI--VMSNHQSDTTDQD

Query:  KFGPDTFCYFKREVIDLL
             T C    +V D++
Subjt:  KFGPDTFCYFKREVIDLL

A0A5D3D655 Retrotrans_gag domain-containing protein1.9e-2946.73Show/hide
Query:  YQEEEAYVPR-KRLRARTNLAENEHHLIARFVGGLRMDIKEKVKFQVFHFLADAIAFTEVVEELNGIRSKNAARKATCEASTSRRINFSSKNKDFVHQSA
        Y++   Y+    RL ARTNL E+E HLIARF GGLRMD++EKVK Q F +L++ IA+ E VEE+   +SK   RK   E STS         K+ +   A
Subjt:  YQEEEAYVPR-KRLRARTNLAENEHHLIARFVGGLRMDIKEKVKFQVFHFLADAIAFTEVVEELNGIRSKNAARKATCEASTSRRINFSSKNKDFVHQSA

Query:  TNKSKEVEKDNQEAMMEKKTEANGK-------KKEQNPYVRSFKGVCYRCGQTRHPSNTCPQHKTVAFIDEEDEDSIKNIEESEEEAKMIEPNDGDRFS
         NK+K +EKD +    EKK + N K       KK +NPY R F G CYRCGQ  HPS + PQ KTVAF+D+E+     N EE E++A++IE ++GD  S
Subjt:  TNKSKEVEKDNQEAMMEKKTEANGK-------KKEQNPYVRSFKGVCYRCGQTRHPSNTCPQHKTVAFIDEEDEDSIKNIEESEEEAKMIEPNDGDRFS

A0A5D3DUN6 NET domain-containing protein7.4e-4291.75Show/hide
Query:  MSNHQSDTTDQDKFGPDTFCYFKREVIDLLSQEDNVPSPPHNSRISGASPPFSDCIGPKLSHFRKEKLKTLLRQSVVTLSKEVNEMFEPARSTQRLK
        MSNHQSDT DQDKFGPDTF  FKREVIDLLSQEDNVPSPP NS+ SGASPPFSDCIGPKLSHF+KEKLKTLLRQSVVTLSKEVNEMFEPARSTQ LK
Subjt:  MSNHQSDTTDQDKFGPDTFCYFKREVIDLLSQEDNVPSPPHNSRISGASPPFSDCIGPKLSHFRKEKLKTLLRQSVVTLSKEVNEMFEPARSTQRLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G40600.1 unknown protein6.9e-0835.29Show/hide
Query:  SNHQSDTTDQDKFGPDTFCYFKREVIDLLSQEDNVPSPPHNSRISGASPPFSDCIGPKLSHFRKEKLKTLLRQSVVTLSKEVNEM
        +   + + + ++ GPD F Y++ +V +LLSQE+ +   PH++ +  A    ++ IG +LS  ++EKL  LLRQ V+    EV+EM
Subjt:  SNHQSDTTDQDKFGPDTFCYFKREVIDLLSQEDNVPSPPHNSRISGASPPFSDCIGPKLSHFRKEKLKTLLRQSVVTLSKEVNEM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGATTCCCAAGATTCGGATTCAATAAGTGATGATTACCAAGAAGAAGAAGCTTATGTTCCAAGAAAAAGATTAAGAGCAAGAACCAACTTGGCAGAAAATGAGCA
TCACCTAATTGCTAGATTTGTCGGCGGTCTTCGAATGGACATTAAAGAAAAGGTAAAATTCCAAGTTTTTCATTTTTTGGCTGATGCAATTGCTTTTACCGAGGTAGTGG
AGGAATTGAATGGGATACGTTCCAAGAATGCCGCAAGAAAAGCAACATGTGAAGCATCCACCAGTAGAAGAATCAATTTTAGTAGCAAGAATAAGGACTTTGTTCATCAA
TCAGCCACAAATAAAAGCAAAGAAGTGGAGAAAGATAATCAAGAAGCTATGATGGAGAAAAAAACAGAAGCAAATGGTAAAAAAAAAGAACAAAATCCTTATGTTCGATC
CTTTAAAGGGGTTTGCTATAGGTGTGGTCAAACAAGACATCCTTCAAATACTTGTCCTCAACACAAAACAGTAGCATTCATTGATGAAGAAGATGAAGATTCCATCAAGA
ACATTGAAGAAAGTGAAGAAGAAGCCAAGATGATTGAACCGAATGATGGCGATAGATTTTCTTCCCTCTGGTGTTGCATTGTTATGTCAAACCATCAATCGGATACAACT
GACCAAGATAAATTCGGACCTGATACCTTCTGTTACTTCAAACGGGAAGTAATAGATTTATTATCTCAAGAGGATAATGTACCTTCTCCTCCCCATAATTCACGGATATC
TGGAGCTTCACCTCCATTTAGTGATTGCATAGGACCTAAGCTGTCTCATTTTAGAAAGGAAAAGCTGAAGACATTGCTCAGGCAGAGTGTAGTTACTCTCTCGAAAGAAG
TAAATGAGATGTTTGAGCCTGCTCGATCTACCCAGCGCTTGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGATTCCCAAGATTCGGATTCAATAAGTGATGATTACCAAGAAGAAGAAGCTTATGTTCCAAGAAAAAGATTAAGAGCAAGAACCAACTTGGCAGAAAATGAGCA
TCACCTAATTGCTAGATTTGTCGGCGGTCTTCGAATGGACATTAAAGAAAAGGTAAAATTCCAAGTTTTTCATTTTTTGGCTGATGCAATTGCTTTTACCGAGGTAGTGG
AGGAATTGAATGGGATACGTTCCAAGAATGCCGCAAGAAAAGCAACATGTGAAGCATCCACCAGTAGAAGAATCAATTTTAGTAGCAAGAATAAGGACTTTGTTCATCAA
TCAGCCACAAATAAAAGCAAAGAAGTGGAGAAAGATAATCAAGAAGCTATGATGGAGAAAAAAACAGAAGCAAATGGTAAAAAAAAAGAACAAAATCCTTATGTTCGATC
CTTTAAAGGGGTTTGCTATAGGTGTGGTCAAACAAGACATCCTTCAAATACTTGTCCTCAACACAAAACAGTAGCATTCATTGATGAAGAAGATGAAGATTCCATCAAGA
ACATTGAAGAAAGTGAAGAAGAAGCCAAGATGATTGAACCGAATGATGGCGATAGATTTTCTTCCCTCTGGTGTTGCATTGTTATGTCAAACCATCAATCGGATACAACT
GACCAAGATAAATTCGGACCTGATACCTTCTGTTACTTCAAACGGGAAGTAATAGATTTATTATCTCAAGAGGATAATGTACCTTCTCCTCCCCATAATTCACGGATATC
TGGAGCTTCACCTCCATTTAGTGATTGCATAGGACCTAAGCTGTCTCATTTTAGAAAGGAAAAGCTGAAGACATTGCTCAGGCAGAGTGTAGTTACTCTCTCGAAAGAAG
TAAATGAGATGTTTGAGCCTGCTCGATCTACCCAGCGCTTGAAGTAA
Protein sequenceShow/hide protein sequence
MQDSQDSDSISDDYQEEEAYVPRKRLRARTNLAENEHHLIARFVGGLRMDIKEKVKFQVFHFLADAIAFTEVVEELNGIRSKNAARKATCEASTSRRINFSSKNKDFVHQ
SATNKSKEVEKDNQEAMMEKKTEANGKKKEQNPYVRSFKGVCYRCGQTRHPSNTCPQHKTVAFIDEEDEDSIKNIEESEEEAKMIEPNDGDRFSSLWCCIVMSNHQSDTT
DQDKFGPDTFCYFKREVIDLLSQEDNVPSPPHNSRISGASPPFSDCIGPKLSHFRKEKLKTLLRQSVVTLSKEVNEMFEPARSTQRLK