; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0026472 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026472
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDNA-directed RNA polymerase III subunit RPC4
Genome locationchr02:2508873..2511629
RNA-Seq ExpressionPI0026472
SyntenyPI0026472
Gene Ontology termsGO:0006383 - transcription by RNA polymerase III (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsIPR007811 - DNA-directed RNA polymerase III subunit RPC4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055789.1 DNA-directed RNA polymerase III subunit RPC4 [Cucumis melo var. makuwa]2.1e-12884.35Show/hide
Query:  MEHDPPKRRQLLQGRFLKFAPKAPIRRIPKPEVKAEIAEDADAAQARDLLKRFNESTQRARQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNED
        ME DPPK +     R LKFAPKAPIRR+PKPEVKAE+AED DAAQARDLLKRFNESTQRA+QRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNED
Subjt:  MEHDPPKRRQLLQGRFLKFAPKAPIRRIPKPEVKAEIAEDADAAQARDLLKRFNESTQRARQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNED

Query:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPEMDVLFLQLPPMVPMIKQSSTVEDMGAANS
        GTLP+STSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPE DV FLQLPPMVPMIKQSSTVE+MG+ N 
Subjt:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPEMDVLFLQLPPMVPMIKQSSTVEDMGAANS

Query:  SDKNKASQPRQKTCSMNELPSGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQDVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL
        S++N ASQ RQKTCSMNELPSGSM  + +       LK G     VSSGMDCGFAQ+VAAIN+EGK CCIVGELSKRAILTPDVDSML+NIEDL
Subjt:  SDKNKASQPRQKTCSMNELPSGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQDVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL

XP_004144123.1 DNA-directed RNA polymerase III subunit RPC4 [Cucumis sativus]2.2e-14692.18Show/hide
Query:  MEHDPPKRRQLLQGRFLKFAPKAPIRRIPKPEVKAEIAEDADAAQARDLLKRFNESTQRARQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNED
        ME +PPK +     R LKFAPKAP+RRIPKPEVKAE+AEDADAAQARDLLKRFNESTQRA+QRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNED
Subjt:  MEHDPPKRRQLLQGRFLKFAPKAPIRRIPKPEVKAEIAEDADAAQARDLLKRFNESTQRARQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNED

Query:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPEMDVLFLQLPPMVPMIKQSSTVEDMGAANS
        GTLP+STSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASEN TYDENTTTAAMNLGLLEENPE DVLFLQLPPMVPMIKQSS+VEDMG+ NS
Subjt:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPEMDVLFLQLPPMVPMIKQSSTVEDMGAANS

Query:  SDKNKASQPRQKTCSMNELPSGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQDVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL
        S++NKASQPRQKTCSMNELPSGS+GKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQ+VAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL
Subjt:  SDKNKASQPRQKTCSMNELPSGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQDVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL

XP_008450913.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC4 [Cucumis melo]3.9e-14390.48Show/hide
Query:  MEHDPPKRRQLLQGRFLKFAPKAPIRRIPKPEVKAEIAEDADAAQARDLLKRFNESTQRARQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNED
        ME DPPK +     R LKFAPKAPIRR+PKPEVKAE+AED DAAQARDLLKRFNESTQRA+QRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNED
Subjt:  MEHDPPKRRQLLQGRFLKFAPKAPIRRIPKPEVKAEIAEDADAAQARDLLKRFNESTQRARQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNED

Query:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPEMDVLFLQLPPMVPMIKQSSTVEDMGAANS
        GTLP+STSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPE DV FLQLPPMVPMIKQSSTVE+MG+ N 
Subjt:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPEMDVLFLQLPPMVPMIKQSSTVEDMGAANS

Query:  SDKNKASQPRQKTCSMNELPSGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQDVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL
        S++N ASQ RQKTCSMNELPSGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQ+VAAIN+EGK CCIVGELSKRAILTPDVDSML+NIEDL
Subjt:  SDKNKASQPRQKTCSMNELPSGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQDVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL

XP_022147557.1 DNA-directed RNA polymerase III subunit rpc4 [Momordica charantia]2.2e-13082.65Show/hide
Query:  MEHDPPKRRQLLQGRFLKFAPKAPIRRIPKPEVKAEIAEDADAAQARDLLKRFNESTQRARQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNED
        ME DPPK     Q R +KFAPKAP RR+PKPEVKAEI E+ADAAQA+DLLKRFNEST RA+Q+VG+KAAPTQVAFGSGG+S+T+RSYG+ KAGNRPRNED
Subjt:  MEHDPPKRRQLLQGRFLKFAPKAPIRRIPKPEVKAEIAEDADAAQARDLLKRFNESTQRARQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNED

Query:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPEMDVLFLQLPPMVPMIKQSSTVEDMGAANS
        GTLPSS SKEYVEPWDYYSYYPVTLPLRRPYSG+PDSLNEEEFGEASEN TYDE+ TT AM+LGLLEENPE +V FLQ+PPMVP+ KQSSTVE M AA+S
Subjt:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPEMDVLFLQLPPMVPMIKQSSTVEDMGAANS

Query:  SDKNKASQPRQKTCSMNELPSGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQDVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL
        S+++K S+ RQ  CS+NELPSGSMGKLLVYRSGAVKLKLGDI+YDVSSGMDCGFAQDVAAINVEGK CCIVGELSKRAILTPDVDSMLK+IEDL
Subjt:  SDKNKASQPRQKTCSMNELPSGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQDVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL

XP_038878504.1 uncharacterized protein LOC120070724 [Benincasa hispida]1.1e-14089.12Show/hide
Query:  MEHDPPKRRQLLQGRFLKFAPKAPIRRIPKPEVKAEIAEDADAAQARDLLKRFNESTQRARQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNED
        ME DPPK +     R LKFAPKAPIRRIPKPEVKAEIAEDADAAQARDLLKRFNEST R +Q++GRKAAPTQVAFGSGG+SSTLRSYGVSKAGNRPRNED
Subjt:  MEHDPPKRRQLLQGRFLKFAPKAPIRRIPKPEVKAEIAEDADAAQARDLLKRFNESTQRARQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNED

Query:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPEMDVLFLQLPPMVPMIKQSSTVEDMGAANS
        GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENF YDENTTT AM+LGLLEENPEMDV FLQLPPMVPM+KQSSTVE  GAANS
Subjt:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPEMDVLFLQLPPMVPMIKQSSTVEDMGAANS

Query:  SDKNKASQPRQKTCSMNELPSGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQDVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL
         +++K SQPRQK C MNELPSGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQDVAA+NVEGK CCIVGELSKRAILTPDVDS+LKNIEDL
Subjt:  SDKNKASQPRQKTCSMNELPSGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQDVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL

TrEMBL top hitse value%identityAlignment
A0A0A0LWX7 Uncharacterized protein1.1e-14692.18Show/hide
Query:  MEHDPPKRRQLLQGRFLKFAPKAPIRRIPKPEVKAEIAEDADAAQARDLLKRFNESTQRARQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNED
        ME +PPK +     R LKFAPKAP+RRIPKPEVKAE+AEDADAAQARDLLKRFNESTQRA+QRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNED
Subjt:  MEHDPPKRRQLLQGRFLKFAPKAPIRRIPKPEVKAEIAEDADAAQARDLLKRFNESTQRARQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNED

Query:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPEMDVLFLQLPPMVPMIKQSSTVEDMGAANS
        GTLP+STSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASEN TYDENTTTAAMNLGLLEENPE DVLFLQLPPMVPMIKQSS+VEDMG+ NS
Subjt:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPEMDVLFLQLPPMVPMIKQSSTVEDMGAANS

Query:  SDKNKASQPRQKTCSMNELPSGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQDVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL
        S++NKASQPRQKTCSMNELPSGS+GKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQ+VAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL
Subjt:  SDKNKASQPRQKTCSMNELPSGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQDVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL

A0A1S3BPR1 DNA-directed RNA polymerase III subunit RPC41.9e-14390.48Show/hide
Query:  MEHDPPKRRQLLQGRFLKFAPKAPIRRIPKPEVKAEIAEDADAAQARDLLKRFNESTQRARQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNED
        ME DPPK +     R LKFAPKAPIRR+PKPEVKAE+AED DAAQARDLLKRFNESTQRA+QRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNED
Subjt:  MEHDPPKRRQLLQGRFLKFAPKAPIRRIPKPEVKAEIAEDADAAQARDLLKRFNESTQRARQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNED

Query:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPEMDVLFLQLPPMVPMIKQSSTVEDMGAANS
        GTLP+STSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPE DV FLQLPPMVPMIKQSSTVE+MG+ N 
Subjt:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPEMDVLFLQLPPMVPMIKQSSTVEDMGAANS

Query:  SDKNKASQPRQKTCSMNELPSGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQDVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL
        S++N ASQ RQKTCSMNELPSGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQ+VAAIN+EGK CCIVGELSKRAILTPDVDSML+NIEDL
Subjt:  SDKNKASQPRQKTCSMNELPSGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQDVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL

A0A5A7UQN3 DNA-directed RNA polymerase III subunit RPC41.0e-12884.35Show/hide
Query:  MEHDPPKRRQLLQGRFLKFAPKAPIRRIPKPEVKAEIAEDADAAQARDLLKRFNESTQRARQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNED
        ME DPPK +     R LKFAPKAPIRR+PKPEVKAE+AED DAAQARDLLKRFNESTQRA+QRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNED
Subjt:  MEHDPPKRRQLLQGRFLKFAPKAPIRRIPKPEVKAEIAEDADAAQARDLLKRFNESTQRARQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNED

Query:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPEMDVLFLQLPPMVPMIKQSSTVEDMGAANS
        GTLP+STSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPE DV FLQLPPMVPMIKQSSTVE+MG+ N 
Subjt:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPEMDVLFLQLPPMVPMIKQSSTVEDMGAANS

Query:  SDKNKASQPRQKTCSMNELPSGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQDVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL
        S++N ASQ RQKTCSMNELPSGSM  + +       LK G     VSSGMDCGFAQ+VAAIN+EGK CCIVGELSKRAILTPDVDSML+NIEDL
Subjt:  SDKNKASQPRQKTCSMNELPSGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQDVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL

A0A6J1D2P1 DNA-directed RNA polymerase III subunit rpc41.1e-13082.65Show/hide
Query:  MEHDPPKRRQLLQGRFLKFAPKAPIRRIPKPEVKAEIAEDADAAQARDLLKRFNESTQRARQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNED
        ME DPPK     Q R +KFAPKAP RR+PKPEVKAEI E+ADAAQA+DLLKRFNEST RA+Q+VG+KAAPTQVAFGSGG+S+T+RSYG+ KAGNRPRNED
Subjt:  MEHDPPKRRQLLQGRFLKFAPKAPIRRIPKPEVKAEIAEDADAAQARDLLKRFNESTQRARQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNED

Query:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPEMDVLFLQLPPMVPMIKQSSTVEDMGAANS
        GTLPSS SKEYVEPWDYYSYYPVTLPLRRPYSG+PDSLNEEEFGEASEN TYDE+ TT AM+LGLLEENPE +V FLQ+PPMVP+ KQSSTVE M AA+S
Subjt:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPEMDVLFLQLPPMVPMIKQSSTVEDMGAANS

Query:  SDKNKASQPRQKTCSMNELPSGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQDVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL
        S+++K S+ RQ  CS+NELPSGSMGKLLVYRSGAVKLKLGDI+YDVSSGMDCGFAQDVAAINVEGK CCIVGELSKRAILTPDVDSMLK+IEDL
Subjt:  SDKNKASQPRQKTCSMNELPSGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQDVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL

A0A6J1JLT3 uncharacterized protein LOC1114855834.9e-12882.99Show/hide
Query:  MEHDPPKRRQLLQGRFLKFAPKAPIRRIPKPEVKAEIAEDADAAQARDLLKRFNESTQRARQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNED
        ME+D  K     Q R +KFAPKAP RRIPKPEVK EIAEDADAAQARDLLKRFNEST RARQR+G+KAAPTQVAFGSGG+S+T+RS+G+SKAGNR  NED
Subjt:  MEHDPPKRRQLLQGRFLKFAPKAPIRRIPKPEVKAEIAEDADAAQARDLLKRFNESTQRARQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNED

Query:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPEMDVLFLQLPPMVPMIKQSSTVEDMGAANS
        G+LPS+TSKEYVEPWDYYSYYPVTLPLR PYSGNPDSLNEEEFGE SE  +YDE TTT A++LGLLEENPE D+ FLQLPPMVP+IKQSSTVE +GAANS
Subjt:  GTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPEMDVLFLQLPPMVPMIKQSSTVEDMGAANS

Query:  SDKNKASQPRQKTCSMNELPSGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQDVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL
        S+    SQPRQKTCSMNELPSGSMGKLLVYRSGAVKLKLGDIIYDVSSGM CGFAQDVAAINVEGK CCI+GELSKRAILTPDV+SMLKN+EDL
Subjt:  SDKNKASQPRQKTCSMNELPSGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQDVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL

SwissProt top hitse value%identityAlignment
O74857 DNA-directed RNA polymerase III subunit rpc43.5e-0626.01Show/hide
Query:  LNEEEFGEASENFTYDENTTTAAMNLGLLEENPEMD-----VLFLQLPPMVPM---------IKQSSTVEDMGAANSSDKNKASQP---RQKTCSMNEL-
        +N+E+  E  E    D    + A +LGL E+    D     ++ +Q P  +P          +  SS V++  A   +D  +   P    ++  ++++L 
Subjt:  LNEEEFGEASENFTYDENTTTAAMNLGLLEENPEMD-----VLFLQLPPMVPM---------IKQSSTVEDMGAANSSDKNKASQP---RQKTCSMNEL-

Query:  ---------PSGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQDVAAINVEGKRCCIVGELSKRAILTPD
                 P+G +G L V++SG   L++G + + V SG DC F Q++A ++ + KR   +G   +R I++PD
Subjt:  ---------PSGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQDVAAINVEGKRCCIVGELSKRAILTPD

P05423 DNA-directed RNA polymerase III subunit RPC41.3e-0829.01Show/hide
Query:  EMDVLFLQLPPMVP---------MIKQSSTVED-MGAANSSDKNKASQPRQKTCSMNELPSGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQDVAA
        E ++LFLQLP  +P          IK     ED        +K++ ++  +  C++ +L  G +GKLL+ +SG V+L LG +  DV+ G  C F Q++ +
Subjt:  EMDVLFLQLPPMVP---------MIKQSSTVED-MGAANSSDKNKASQPRQKTCSMNELPSGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQDVAA

Query:  INVEGKR---CCIVGELSKRAILTPDVDSML
        + +   R     ++G +  + + +PD +S+L
Subjt:  INVEGKR---CCIVGELSKRAILTPDVDSML

P25441 DNA-directed RNA polymerase III subunit RPC45.1e-0525.78Show/hide
Query:  LEENPEMDVLFLQLPPMVPMIKQSST---VEDMGAANSSDKNKASQPRQK----TCSMNELPSGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQDV
        +   PE  ++F QLP  +P  ++ +     EDM    S    K    ++K      S  EL +G +G + V++SG + +K+G+++ D+  G +  F QDV
Subjt:  LEENPEMDVLFLQLPPMVPMIKQSST---VEDMGAANSSDKNKASQPRQK----TCSMNELPSGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQDV

Query:  AAINV--EGKRCCIVGELSKRAILTPDV
         A+++  +     ++G +  + ++TP +
Subjt:  AAINV--EGKRCCIVGELSKRAILTPDV

Q5E9Z7 DNA-directed RNA polymerase III subunit RPC47.6e-0925.96Show/hide
Query:  PRNEDGTLPSSTSKEYVEPWDYYSYYPVTLPLR--RPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPEMDVLFLQLPPMVP---------
        P+ ED  +     K   EP D      +  PLR  R   G P  ++  E                    L  L    E ++LFLQLP  +P         
Subjt:  PRNEDGTLPSSTSKEYVEPWDYYSYYPVTLPLR--RPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPEMDVLFLQLPPMVP---------

Query:  MIKQSSTVED-MGAANSSDKNKASQPRQKTCSMNELPSGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQDVAAINVEGKR---CCIVGELSKRAIL
         IK     ED        +K++ ++  + TC++ +L  G +GKLL+ +SG V+L LG +  DV+ G  C F Q++ ++ +   R     ++G +  + + 
Subjt:  MIKQSSTVED-MGAANSSDKNKASQPRQKTCSMNELPSGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQDVAAINVEGKR---CCIVGELSKRAIL

Query:  TPDVDSML
        +P+ +S+L
Subjt:  TPDVDSML

Q91WD1 DNA-directed RNA polymerase III subunit RPC42.2e-0827.91Show/hide
Query:  DVLFLQLPPMVP---------MIKQSSTVED-MGAANSSDKNKASQPRQKTCSMNELPSGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQDVAAIN
        ++LFLQLP  +P          +K     ED        +K++ ++  +  C++ +L  G +GKLL+ +SG V+L LG +  DV+ G  C F Q++ ++ 
Subjt:  DVLFLQLPPMVP---------MIKQSSTVED-MGAANSSDKNKASQPRQKTCSMNELPSGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQDVAAIN

Query:  VEGKR---CCIVGELSKRAILTPDVDSML
        +   R     ++G +  + + +PD +S+L
Subjt:  VEGKR---CCIVGELSKRAILTPDVDSML

Arabidopsis top hitse value%identityAlignment
AT4G25180.1 RNA polymerase III RPC41.8e-3735.1Show/hide
Query:  PKAPIRRIP-KPEVKAEIAEDADAAQARDLLKRFNESTQRARQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRN---------------------
        P  P RR+P  P    E  ED +  +A    ++F+      R +   KA+  +VAF    S   +RS+GV K  ++P +                     
Subjt:  PKAPIRRIP-KPEVKAEIAEDADAAQARDLLKRFNESTQRARQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRN---------------------

Query:  EDG----TLPSSTSKEYVEPWDY-YSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLE-ENPEMDVLFLQLPPMVPMIKQSSTV
        EDG       + T  +YVEPWDY  SYYP  LPLR+P SG+ + L++EEFGE ++N  YDENT  +A  LGL   ++ +  +   ++P  +P++KQ++  
Subjt:  EDG----TLPSSTSKEYVEPWDY-YSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLE-ENPEMDVLFLQLPPMVPMIKQSSTV

Query:  EDMGAANSSDKNKASQPRQKTCSMNELPSGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQDVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIE
           GA       + S           LP G MGK+LVY+SGAVKLK+GD ++DVS G       DV AI+++G+ C  +G  +K   +TPDV+S+L    
Subjt:  EDMGAANSSDKNKASQPRQKTCSMNELPSGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQDVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIE

Query:  DL
        D+
Subjt:  DL

AT5G09380.1 RNA polymerase III RPC41.4e-5845.76Show/hide
Query:  MEHDPPKRRQLLQGRFLKFAPKAPIRRIPKPEVKAEIAED-ADAAQARDLLKRFNESTQRARQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNE
        ME  PP R+       +KFAPKAP +R+PKPEVK E+ ED +++AQA +LL+R NE + R + +  +K   +QVA+  GG  ++ RS   +K  NR    
Subjt:  MEHDPPKRRQLLQGRFLKFAPKAPIRRIPKPEVKAEIAED-ADAAQARDLLKRFNESTQRARQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNE

Query:  DGTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPEMDVLFLQLPPMVPMIKQSSTVEDMGAAN
         G+  S+   EY EPWDYYSYYP+TLP+RRPY+G+P+ L+ EEF +A     + E++   A NLGL+E++ E  + F++L P VP+   S+  E++    
Subjt:  DGTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPEMDVLFLQLPPMVPMIKQSSTVEDMGAAN

Query:  SSDKNKASQPRQKTCSMNELPSGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQDVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL
         +  N      +KT  +  LP G MGKLLVY+SGAVK+KLG+++YDVS G+   FAQDV  +N E K CC+VG++ K A+LTPD+DS+LK+IE++
Subjt:  SSDKNKASQPRQKTCSMNELPSGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQDVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCATGATCCACCCAAAAGAAGACAGCTGCTCCAAGGAAGGTTTTTGAAATTTGCTCCAAAAGCACCTATTCGCCGTATACCAAAACCTGAAGTCAAAGCAGAAAT
AGCAGAGGACGCTGATGCTGCTCAAGCCAGGGATTTACTAAAACGCTTCAATGAAAGCACCCAGAGGGCAAGGCAAAGAGTTGGGAGAAAAGCGGCACCTACACAAGTTG
CATTTGGTTCTGGAGGTTCATCGAGCACCCTAAGATCATATGGTGTTTCGAAAGCTGGAAATAGACCAAGAAATGAAGATGGAACTCTTCCGTCTAGTACAAGCAAGGAG
TATGTAGAACCATGGGATTATTACAGTTATTATCCTGTAACTCTTCCTCTGCGGAGACCATATTCAGGAAATCCAGATTCTCTAAACGAGGAAGAATTTGGTGAGGCTTC
AGAAAACTTCACCTATGATGAAAATACAACAACTGCAGCAATGAATCTTGGTCTATTGGAGGAGAACCCGGAGATGGATGTCTTGTTTTTACAATTACCACCTATGGTGC
CTATGATAAAGCAATCTTCTACTGTAGAAGACATGGGGGCAGCCAACAGCTCAGATAAAAATAAAGCCTCACAACCTCGACAGAAAACCTGCTCTATGAATGAGTTACCT
TCTGGCTCCATGGGTAAACTGCTTGTGTATAGGAGTGGTGCTGTCAAGTTAAAGCTTGGCGATATTATATATGATGTTTCTTCTGGAATGGATTGTGGCTTTGCACAAGA
CGTTGCAGCTATCAATGTGGAAGGGAAGCGTTGCTGCATCGTTGGGGAGCTTAGCAAGCGTGCCATTTTAACACCAGACGTGGACTCAATGTTAAAGAACATTGAGGATT
TATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCATGATCCACCCAAAAGAAGACAGCTGCTCCAAGGAAGGTTTTTGAAATTTGCTCCAAAAGCACCTATTCGCCGTATACCAAAACCTGAAGTCAAAGCAGAAAT
AGCAGAGGACGCTGATGCTGCTCAAGCCAGGGATTTACTAAAACGCTTCAATGAAAGCACCCAGAGGGCAAGGCAAAGAGTTGGGAGAAAAGCGGCACCTACACAAGTTG
CATTTGGTTCTGGAGGTTCATCGAGCACCCTAAGATCATATGGTGTTTCGAAAGCTGGAAATAGACCAAGAAATGAAGATGGAACTCTTCCGTCTAGTACAAGCAAGGAG
TATGTAGAACCATGGGATTATTACAGTTATTATCCTGTAACTCTTCCTCTGCGGAGACCATATTCAGGAAATCCAGATTCTCTAAACGAGGAAGAATTTGGTGAGGCTTC
AGAAAACTTCACCTATGATGAAAATACAACAACTGCAGCAATGAATCTTGGTCTATTGGAGGAGAACCCGGAGATGGATGTCTTGTTTTTACAATTACCACCTATGGTGC
CTATGATAAAGCAATCTTCTACTGTAGAAGACATGGGGGCAGCCAACAGCTCAGATAAAAATAAAGCCTCACAACCTCGACAGAAAACCTGCTCTATGAATGAGTTACCT
TCTGGCTCCATGGGTAAACTGCTTGTGTATAGGAGTGGTGCTGTCAAGTTAAAGCTTGGCGATATTATATATGATGTTTCTTCTGGAATGGATTGTGGCTTTGCACAAGA
CGTTGCAGCTATCAATGTGGAAGGGAAGCGTTGCTGCATCGTTGGGGAGCTTAGCAAGCGTGCCATTTTAACACCAGACGTGGACTCAATGTTAAAGAACATTGAGGATT
TATAA
Protein sequenceShow/hide protein sequence
MEHDPPKRRQLLQGRFLKFAPKAPIRRIPKPEVKAEIAEDADAAQARDLLKRFNESTQRARQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDGTLPSSTSKE
YVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPEMDVLFLQLPPMVPMIKQSSTVEDMGAANSSDKNKASQPRQKTCSMNELP
SGSMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQDVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL