CuGenDBv2

Gene ID	PI0026473
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	BRISC and BRCA1-A complex member 1
Genome location	chr07:23256235..23259172
RNA-Seq Expression	PI0026473
Synteny	PI0026473
Gene Ontology terms	GO:0045739 - positive regulation of DNA repair (biological process) GO:0070531 - BRCA1-A complex (cellular component) GO:0070552 - BRISC complex (cellular component)
InterPro domains	IPR026126 - BRISC and BRCA1-A complex member 1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004141308.1 BRISC and BRCA1-A complex member 1 [Cucumis sativus]

1.2e-111

98.54

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Query:  MDSIKQAILLFVHAKLSMNPDHRFSFTTIAKSAIWLKKEFSSDIASAEAAVRGLGATSPCNHADLTSLFRLAAHESRKSTAQNRILRLILIYCRSSTRPQ
        MDSIKQAILLFVHAKLSMNPDHRF+FTTIAKSAIWLKKEFSSDIASAEAAVRGLGATSPCNHADLTSLFRLAAHESRKSTAQNRILRLILIYCRSST+PQ
Subjt:  MDSIKQAILLFVHAKLSMNPDHRFSFTTIAKSAIWLKKEFSSDIASAEAAVRGLGATSPCNHADLTSLFRLAAHESRKSTAQNRILRLILIYCRSSTRPQ

Query:  HQWPANQKLFTFDVIYLHEKPGPDNCPQEVYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSAPPNEV
        HQWPANQKLFTFDVIYLHEKPGPDNCPQEVYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPAD+APPNEV
Subjt:  HQWPANQKLFTFDVIYLHEKPGPDNCPQEVYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSAPPNEV

Query:  VPVTSQ
        VPVTSQ
Subjt:  VPVTSQ

XP_008452703.1 PREDICTED: BRISC and BRCA1-A complex member 1 [Cucumis melo]

5.5e-112

99.03

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Query:  MDSIKQAILLFVHAKLSMNPDHRFSFTTIAKSAIWLKKEFSSDIASAEAAVRGLGATSPCNHADLTSLFRLAAHESRKSTAQNRILRLILIYCRSSTRPQ
        MDSIKQAILLFVHAKLSMNPDHRF+FTTIAKSAIWLKKEFSSDIASAEAAVRGLGATSPCNHADLTSLFRLAAHESRKSTAQNRILRLILIYCRSSTRPQ
Subjt:  MDSIKQAILLFVHAKLSMNPDHRFSFTTIAKSAIWLKKEFSSDIASAEAAVRGLGATSPCNHADLTSLFRLAAHESRKSTAQNRILRLILIYCRSSTRPQ

Query:  HQWPANQKLFTFDVIYLHEKPGPDNCPQEVYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSAPPNEV
        HQWPANQKLFTFDVIYLHEKPGPDNCPQEVYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADS PPNEV
Subjt:  HQWPANQKLFTFDVIYLHEKPGPDNCPQEVYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSAPPNEV

Query:  VPVTSQ
        VPVTSQ
Subjt:  VPVTSQ

XP_022142347.1 uncharacterized protein LOC111012487 [Momordica charantia]

4.2e-104

92.23

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Query:  MDSIKQAILLFVHAKLSMNPDHRFSFTTIAKSAIWLKKEFSSDIASAEAAVRGLGATSPCNHADLTSLFRLAAHESRKSTAQNRILRLILIYCRSSTRPQ
        MDSIKQAILLFVHAKLS+NP+HRF+FTTIAKSAIWLKKEFSSDI S EAAVRGL ATS C+HADLTSLFRLAAHE++KSTAQNRILRLILIYCRSSTRPQ
Subjt:  MDSIKQAILLFVHAKLSMNPDHRFSFTTIAKSAIWLKKEFSSDIASAEAAVRGLGATSPCNHADLTSLFRLAAHESRKSTAQNRILRLILIYCRSSTRPQ

Query:  HQWPANQKLFTFDVIYLHEKPGPDNCPQEVYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSAPPNEV
        HQWP NQKLFT DVIYLHEKPGPDNCPQEVYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHP+QRISLDDLDIPKPLTKKLPP DS P NEV
Subjt:  HQWPANQKLFTFDVIYLHEKPGPDNCPQEVYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSAPPNEV

Query:  VPVTSQ
        VPVTSQ
Subjt:  VPVTSQ

XP_023524345.1 uncharacterized protein LOC111788267 [Cucurbita pepo subsp. pepo]

1.7e-100

90.29

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Query:  MDSIKQAILLFVHAKLSMNPDHRFSFTTIAKSAIWLKKEFSSDIASAEAAVRGLGATSPCNHADLTSLFRLAAHESRKSTAQNRILRLILIYCRSSTRPQ
        MDSIKQAILLFVHAKLSMNPDHRF+FTTIAKSA WLKK+FSSDIAS EAA+RGL  TS C+HADLTSLFRLAAHE+RKSTAQN ILR+ILIYCRSSTRPQ
Subjt:  MDSIKQAILLFVHAKLSMNPDHRFSFTTIAKSAIWLKKEFSSDIASAEAAVRGLGATSPCNHADLTSLFRLAAHESRKSTAQNRILRLILIYCRSSTRPQ

Query:  HQWPANQKLFTFDVIYLHEKPGPDNCPQEVYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSAPPNEV
        HQWP NQKLFT DVIYLHEKPGPDNCPQEVYDALVDALD VSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDL+IPK LTKK+PPADS P NEV
Subjt:  HQWPANQKLFTFDVIYLHEKPGPDNCPQEVYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSAPPNEV

Query:  VPVTSQ
        VPVTSQ
Subjt:  VPVTSQ

XP_038897935.1 BRISC and BRCA1-A complex member 1 [Benincasa hispida]

1.2e-106

92.72

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Query:  MDSIKQAILLFVHAKLSMNPDHRFSFTTIAKSAIWLKKEFSSDIASAEAAVRGLGATSPCNHADLTSLFRLAAHESRKSTAQNRILRLILIYCRSSTRPQ
        MDSIKQAILLFVHAKLSMNPDHRF+FTT+AKSAIWLKKEFSSDIA+AEAAVRGLGAT+PC+HADLTSLFR+AAHE+RKSTAQNRILR+ILIYCRSSTRPQ
Subjt:  MDSIKQAILLFVHAKLSMNPDHRFSFTTIAKSAIWLKKEFSSDIASAEAAVRGLGATSPCNHADLTSLFRLAAHESRKSTAQNRILRLILIYCRSSTRPQ

Query:  HQWPANQKLFTFDVIYLHEKPGPDNCPQEVYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSAPPNEV
        HQWP NQK+FTFDVIYLHEKPGPDNCPQEVYDALVDALDHVSQYEGYIFESGQG+AR+LYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADS P  EV
Subjt:  HQWPANQKLFTFDVIYLHEKPGPDNCPQEVYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSAPPNEV

Query:  VPVTSQ
        VPVTSQ
Subjt:  VPVTSQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L024 BRISC and BRCA1-A complex member 1

5.9e-112

98.54

Show/hide

Query:  MDSIKQAILLFVHAKLSMNPDHRFSFTTIAKSAIWLKKEFSSDIASAEAAVRGLGATSPCNHADLTSLFRLAAHESRKSTAQNRILRLILIYCRSSTRPQ
        MDSIKQAILLFVHAKLSMNPDHRF+FTTIAKSAIWLKKEFSSDIASAEAAVRGLGATSPCNHADLTSLFRLAAHESRKSTAQNRILRLILIYCRSST+PQ
Subjt:  MDSIKQAILLFVHAKLSMNPDHRFSFTTIAKSAIWLKKEFSSDIASAEAAVRGLGATSPCNHADLTSLFRLAAHESRKSTAQNRILRLILIYCRSSTRPQ

Query:  HQWPANQKLFTFDVIYLHEKPGPDNCPQEVYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSAPPNEV
        HQWPANQKLFTFDVIYLHEKPGPDNCPQEVYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPAD+APPNEV
Subjt:  HQWPANQKLFTFDVIYLHEKPGPDNCPQEVYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSAPPNEV

Query:  VPVTSQ
        VPVTSQ
Subjt:  VPVTSQ

A0A1S3BUH3 BRISC and BRCA1-A complex member 1

2.7e-112

99.03

Show/hide

Query:  MDSIKQAILLFVHAKLSMNPDHRFSFTTIAKSAIWLKKEFSSDIASAEAAVRGLGATSPCNHADLTSLFRLAAHESRKSTAQNRILRLILIYCRSSTRPQ
        MDSIKQAILLFVHAKLSMNPDHRF+FTTIAKSAIWLKKEFSSDIASAEAAVRGLGATSPCNHADLTSLFRLAAHESRKSTAQNRILRLILIYCRSSTRPQ
Subjt:  MDSIKQAILLFVHAKLSMNPDHRFSFTTIAKSAIWLKKEFSSDIASAEAAVRGLGATSPCNHADLTSLFRLAAHESRKSTAQNRILRLILIYCRSSTRPQ

Query:  HQWPANQKLFTFDVIYLHEKPGPDNCPQEVYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSAPPNEV
        HQWPANQKLFTFDVIYLHEKPGPDNCPQEVYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADS PPNEV
Subjt:  HQWPANQKLFTFDVIYLHEKPGPDNCPQEVYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSAPPNEV

Query:  VPVTSQ
        VPVTSQ
Subjt:  VPVTSQ

A0A6J1CMH8 BRISC and BRCA1-A complex member 1

2.0e-104

92.23

Show/hide

Query:  MDSIKQAILLFVHAKLSMNPDHRFSFTTIAKSAIWLKKEFSSDIASAEAAVRGLGATSPCNHADLTSLFRLAAHESRKSTAQNRILRLILIYCRSSTRPQ
        MDSIKQAILLFVHAKLS+NP+HRF+FTTIAKSAIWLKKEFSSDI S EAAVRGL ATS C+HADLTSLFRLAAHE++KSTAQNRILRLILIYCRSSTRPQ
Subjt:  MDSIKQAILLFVHAKLSMNPDHRFSFTTIAKSAIWLKKEFSSDIASAEAAVRGLGATSPCNHADLTSLFRLAAHESRKSTAQNRILRLILIYCRSSTRPQ

Query:  HQWPANQKLFTFDVIYLHEKPGPDNCPQEVYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSAPPNEV
        HQWP NQKLFT DVIYLHEKPGPDNCPQEVYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHP+QRISLDDLDIPKPLTKKLPP DS P NEV
Subjt:  HQWPANQKLFTFDVIYLHEKPGPDNCPQEVYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSAPPNEV

Query:  VPVTSQ
        VPVTSQ
Subjt:  VPVTSQ

A0A6J1FN80 BRISC and BRCA1-A complex member 1

8.0e-101

90.29

Show/hide

Query:  MDSIKQAILLFVHAKLSMNPDHRFSFTTIAKSAIWLKKEFSSDIASAEAAVRGLGATSPCNHADLTSLFRLAAHESRKSTAQNRILRLILIYCRSSTRPQ
        MDSIKQAILLFVHAKLSMNPDHRF+FTTIAKSA WLKK+FSSDIAS EAA+RGL  TS C+HADLTSLFRLAAHE+RKSTAQN ILR+ILIYCRSSTRPQ
Subjt:  MDSIKQAILLFVHAKLSMNPDHRFSFTTIAKSAIWLKKEFSSDIASAEAAVRGLGATSPCNHADLTSLFRLAAHESRKSTAQNRILRLILIYCRSSTRPQ

Query:  HQWPANQKLFTFDVIYLHEKPGPDNCPQEVYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSAPPNEV
        HQWP NQKLFT DVIYLHEKPGPDNCPQEVYDALVDALD VSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDL+IPK LTKK+PPADS P NEV
Subjt:  HQWPANQKLFTFDVIYLHEKPGPDNCPQEVYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSAPPNEV

Query:  VPVTSQ
        VPVTSQ
Subjt:  VPVTSQ

A0A6J1J2J5 BRISC and BRCA1-A complex member 1

1.8e-100

89.81

Show/hide

Query:  MDSIKQAILLFVHAKLSMNPDHRFSFTTIAKSAIWLKKEFSSDIASAEAAVRGLGATSPCNHADLTSLFRLAAHESRKSTAQNRILRLILIYCRSSTRPQ
        MDSIKQAILLFVHAKLSMNPDHRF+FTTIAKSA WLK++FSSDIAS EAA+RGL  TS C+HADLTSLFRLAAHE+RKSTAQN ILR+ILIYCRSSTRPQ
Subjt:  MDSIKQAILLFVHAKLSMNPDHRFSFTTIAKSAIWLKKEFSSDIASAEAAVRGLGATSPCNHADLTSLFRLAAHESRKSTAQNRILRLILIYCRSSTRPQ

Query:  HQWPANQKLFTFDVIYLHEKPGPDNCPQEVYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSAPPNEV
        HQWP NQKLFT DVIYLHEKPGPDNCPQEVYDALVDALD VSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDL+IPK LTKK+PPADS P NEV
Subjt:  HQWPANQKLFTFDVIYLHEKPGPDNCPQEVYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSAPPNEV

Query:  VPVTSQ
        VPVTSQ
Subjt:  VPVTSQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G32960.1 unknown protein

3.7e-74

65.64

Show/hide

Query:  MDSIKQAILLFVHAKLSMNPDHRFSFTTIAKSAIWLKKEFSSDIASAEAAVRGLGATSPCNHADLTSLFRLAAHESRKSTAQNRILRLILIYCRSSTRPQ
        M+ +KQAI+LF+H KLS+NPDHRF+F T+AKSA WLKKEF+SD  SA A++RGL      + ADLT LFR AA E++ S AQNRI R+ILIYCRSS RP 
Subjt:  MDSIKQAILLFVHAKLSMNPDHRFSFTTIAKSAIWLKKEFSSDIASAEAAVRGLGATSPCNHADLTSLFRLAAHESRKSTAQNRILRLILIYCRSSTRPQ

Query:  HQWPANQKLFTFDVIYLHEKPGPDNCPQEVYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSA
        H+WP NQKLFT DV+YLH+KP PDNCPQ+VYD+LVDA++HVS+YEGYIFESGQG+AR +++ M +LL+HPQQR + DDLDIP  L KK+P  ++A
Subjt:  HQWPANQKLFTFDVIYLHEKPGPDNCPQEVYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSA

AT4G32970.1 unknown protein

1.5e-59

57.98

Show/hide

Query:  MDSIKQAILLFVHAKLSMNPDHRFSFTTIAKSAIWLKKEFSSDIASAEAAVRGLGATSPCNHADLTSLFRLAAHESRKSTAQNRILRLILIYCRSSTRPQ
        ++ +K AI  F+H KLS N DHRF+F T+++SA WLKKEFS+D  SA A++R + AT     ADLT LF+ AA E++ S AQNRILR+IL+YCRSS RP 
Subjt:  MDSIKQAILLFVHAKLSMNPDHRFSFTTIAKSAIWLKKEFSSDIASAEAAVRGLGATSPCNHADLTSLFRLAAHESRKSTAQNRILRLILIYCRSSTRPQ

Query:  HQWPANQKLFTFDVIYLHEKPGPDNCPQEVYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKK
        H WP NQKLFT DV+YLH+K GPDNC  +VYD+LVDA++ VS+YEGYIFE   G+++ ++R M  LLSHP QR +   +D+PKP  KK
Subjt:  HQWPANQKLFTFDVIYLHEKPGPDNCPQEVYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGACTCCATTAAGCAAGCAATTCTTCTCTTCGTCCACGCCAAACTCTCCATGAATCCTGACCATCGATTTTCTTTCACCACCATCGCCAAATCTGCCATTTGGCTCAA
AAAGGAGTTTAGCAGTGATATTGCATCCGCAGAGGCTGCAGTCAGGGGACTTGGTGCTACTTCCCCTTGCAATCACGCCGATCTTACCAGTCTTTTCCGATTAGCTGCTC
ACGAATCAAGAAAATCAACCGCCCAGAATCGAATTCTAAGACTGATTCTTATTTATTGCAGATCATCCACACGGCCCCAACATCAATGGCCTGCGAACCAAAAACTCTTC
ACTTTTGATGTTATATACCTCCACGAGAAGCCTGGACCTGACAACTGCCCACAAGAGGTGTATGATGCCTTAGTTGATGCCCTTGATCATGTCAGCCAGTACGAAGGCTA
TATTTTCGAGAGTGGCCAGGGAGTTGCACGTGTTCTTTACCGTTGCATGTGTCTGTTGTTATCACACCCCCAGCAACGAATATCGCTAGATGATCTCGATATACCAAAGC
CTCTTACAAAGAAATTGCCTCCCGCTGATTCCGCCCCTCCAAACGAAGTTGTCCCTGTTACCAGCCAGTGA

mRNA sequence

Show/hide mRNA sequence

AAACTCCTTGGATAAGAATTGAGTCGATATGATTGAATTGATTGGTGTTGTGCAATCGTATCTAGCTCAAAACCGTAAGCTTAGAGACATGGGCTTCTTCTTCATGCCCT
CAAAATAGAAAAGGAAACGGTAAATCCCCAATTTTAATTTCTGAAACAATTAGCTCCACAAGACACCAAACGCTGATCTTTGTGTTCCAATTTTCAAAATTCGACGCTGA
ATAACCATGGAAGCAATCGAAGTTGAGAGAGGAGGAAGTGGATACTCGCTGAAACCATCGAGATTAAACAACGAAGACATTCTCTTCTGCATAGATGTGAACCCTGAATC
TTCCATTGAGATCAAACCACCGGCTCTAATGGACGACCCATCACCAGAATGGACTCCATTAAGCAAGCAATTCTTCTCTTCGTCCACGCCAAACTCTCCATGAATCCTGA
CCATCGATTTTCTTTCACCACCATCGCCAAATCTGCCATTTGGCTCAAAAAGGAGTTTAGCAGTGATATTGCATCCGCAGAGGCTGCAGTCAGGGGACTTGGTGCTACTT
CCCCTTGCAATCACGCCGATCTTACCAGTCTTTTCCGATTAGCTGCTCACGAATCAAGAAAATCAACCGCCCAGAATCGAATTCTAAGACTGATTCTTATTTATTGCAGA
TCATCCACACGGCCCCAACATCAATGGCCTGCGAACCAAAAACTCTTCACTTTTGATGTTATATACCTCCACGAGAAGCCTGGACCTGACAACTGCCCACAAGAGGTGTA
TGATGCCTTAGTTGATGCCCTTGATCATGTCAGCCAGTACGAAGGCTATATTTTCGAGAGTGGCCAGGGAGTTGCACGTGTTCTTTACCGTTGCATGTGTCTGTTGTTAT
CACACCCCCAGCAACGAATATCGCTAGATGATCTCGATATACCAAAGCCTCTTACAAAGAAATTGCCTCCCGCTGATTCCGCCCCTCCAAACGAAGTTGTCCCTGTTACC
AGCCAGTGAAAAAACTAGGAGCTGAAAACATTGATGGAAACCTGGATGTTGTTGTAGCTTAATGGTACCTCACTTGTTCATCTGTAGTCTGATTTTTTTTTTCCTTTTTC
TGGTGACAGATTAAGTTTTTTTTTTAATGTACATAACGTCAAGTCTAAGACTAGAGAGACAACAGTCTAATGGTATGATATTAATCTGTCATGTTCAGATTATTTGCTCA
ACATGTCATATTTTGATGGATCATATTACTCGTTGTTGGTGCCATTTGGGTATTAGAAAGTTGACTTTCATTGTTGAGATCAAGGAAGAGATGAATATTTTTTTGTATGA
TATATAGATTCTAAAAGCTTGTTCTAATAATTGATAGA

Protein sequence

Show/hide protein sequence

MDSIKQAILLFVHAKLSMNPDHRFSFTTIAKSAIWLKKEFSSDIASAEAAVRGLGATSPCNHADLTSLFRLAAHESRKSTAQNRILRLILIYCRSSTRPQHQWPANQKLF
TFDVIYLHEKPGPDNCPQEVYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKLPPADSAPPNEVVPVTSQ

PI0026473 (gene) of Melon (PI 482460) v1 genome