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PI0026481 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026481
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr11:16167297..16170533
RNA-Seq ExpressionPI0026481
SyntenyPI0026481
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040346.1 hypothetical protein E6C27_scaffold460G00510 [Cucumis melo var. makuwa]6.7e-1289.36Show/hide
Query:  MDNQNDEVRLREAQQGVIARMISSMEALTDRLDRLEIENRARERMLP
        MDNQNDEVRLREAQQGVIA MIS+MEALTDR +RLEIENRARERM P
Subjt:  MDNQNDEVRLREAQQGVIARMISSMEALTDRLDRLEIENRARERMLP

KAA0043652.1 uncharacterized protein E6C27_scaffold320G001000 [Cucumis melo var. makuwa]8.1e-3474.56Show/hide
Query:  MDNQNDEVRLREAQQGVIARMISSMEALTDRLDRLEIENRARERMLPSLAQHVVINHNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGTKKRKAA
        M+NQNDEV+LREAQQGVIARMIS+MEALTDRL+R EIENRARERM P LA  ++INHNDNQ EGDGSD LDDDQVTLLGEPRRVGHGVVR RG   R  A
Subjt:  MDNQNDEVRLREAQQGVIARMISSMEALTDRLDRLEIENRARERMLPSLAQHVVINHNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGTKKRKAA

Query:  KRNKELEAHINPSQ
         +N +  A    SQ
Subjt:  KRNKELEAHINPSQ

KAA0047036.1 uncharacterized protein E6C27_scaffold829G00200 [Cucumis melo var. makuwa]7.9e-2166.3Show/hide
Query:  MEALTDRLDRLEIENRARERMLPSLAQHVVINHNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGTKK------RKAAKRNKELEAHI
        MEALTDRL+RLEIENRARERM P LA  + INHN+NQYEGDG D LDDDQVTLL EPRRVGHGVVR RG  K      R+  +   +LE ++
Subjt:  MEALTDRLDRLEIENRARERMLPSLAQHVVINHNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGTKK------RKAAKRNKELEAHI

TYK09709.1 uncharacterized protein E5676_scaffold447G001250 [Cucumis melo var. makuwa]1.3e-2371.28Show/hide
Query:  MISSMEALTDRLDRLEIENRARERMLPSLAQHVVINHNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGTKKRKAAKRNKELEAHINPSQ
        MIS+MEALTDRL+R EIENRARERM P LA  ++INHNDNQ EGDGSD LDDDQVTLLGEPRRVGHGVVR RG   R  A +N +  A    SQ
Subjt:  MISSMEALTDRLDRLEIENRARERMLPSLAQHVVINHNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGTKKRKAAKRNKELEAHINPSQ

XP_022157414.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024115 [Momordica charantia]1.6e-1040.71Show/hide
Query:  EVRLREAQQGVIARMISSMEALTDRLDRLEIENRARERMLPSLAQHVVINHNDNQYEGDGSDGLDDDQVTLLGEPR----RVGHGVVRGRGTKK-----R
        + R REA +G + RMI SMEALT+R+ RLE +N+A  R+ P     V+   ++++YEGDGSD  +DDQ T+L  PR     VG G+ RGRG  +     +
Subjt:  EVRLREAQQGVIARMISSMEALTDRLDRLEIENRARERMLPSLAQHVVINHNDNQYEGDGSDGLDDDQVTLLGEPR----RVGHGVVRGRGTKK-----R

Query:  KAAKRNKELEAHI
        +A + N +++ ++
Subjt:  KAAKRNKELEAHI

TrEMBL top hitse value%identityAlignment
A0A5A7TE32 Uncharacterized protein3.2e-1289.36Show/hide
Query:  MDNQNDEVRLREAQQGVIARMISSMEALTDRLDRLEIENRARERMLP
        MDNQNDEVRLREAQQGVIA MIS+MEALTDR +RLEIENRARERM P
Subjt:  MDNQNDEVRLREAQQGVIARMISSMEALTDRLDRLEIENRARERMLP

A0A5A7TK52 Retrotrans_gag domain-containing protein3.9e-3474.56Show/hide
Query:  MDNQNDEVRLREAQQGVIARMISSMEALTDRLDRLEIENRARERMLPSLAQHVVINHNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGTKKRKAA
        M+NQNDEV+LREAQQGVIARMIS+MEALTDRL+R EIENRARERM P LA  ++INHNDNQ EGDGSD LDDDQVTLLGEPRRVGHGVVR RG   R  A
Subjt:  MDNQNDEVRLREAQQGVIARMISSMEALTDRLDRLEIENRARERMLPSLAQHVVINHNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGTKKRKAA

Query:  KRNKELEAHINPSQ
         +N +  A    SQ
Subjt:  KRNKELEAHINPSQ

A0A5A7TYI0 Uncharacterized protein3.8e-2166.3Show/hide
Query:  MEALTDRLDRLEIENRARERMLPSLAQHVVINHNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGTKK------RKAAKRNKELEAHI
        MEALTDRL+RLEIENRARERM P LA  + INHN+NQYEGDG D LDDDQVTLL EPRRVGHGVVR RG  K      R+  +   +LE ++
Subjt:  MEALTDRLDRLEIENRARERMLPSLAQHVVINHNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGTKK------RKAAKRNKELEAHI

A0A5D3CHG3 Retrotrans_gag domain-containing protein6.3e-2471.28Show/hide
Query:  MISSMEALTDRLDRLEIENRARERMLPSLAQHVVINHNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGTKKRKAAKRNKELEAHINPSQ
        MIS+MEALTDRL+R EIENRARERM P LA  ++INHNDNQ EGDGSD LDDDQVTLLGEPRRVGHGVVR RG   R  A +N +  A    SQ
Subjt:  MISSMEALTDRLDRLEIENRARERMLPSLAQHVVINHNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGTKKRKAAKRNKELEAHINPSQ

A0A6J1DWE9 LOW QUALITY PROTEIN: uncharacterized protein LOC1110241158.0e-1140.71Show/hide
Query:  EVRLREAQQGVIARMISSMEALTDRLDRLEIENRARERMLPSLAQHVVINHNDNQYEGDGSDGLDDDQVTLLGEPR----RVGHGVVRGRGTKK-----R
        + R REA +G + RMI SMEALT+R+ RLE +N+A  R+ P     V+   ++++YEGDGSD  +DDQ T+L  PR     VG G+ RGRG  +     +
Subjt:  EVRLREAQQGVIARMISSMEALTDRLDRLEIENRARERMLPSLAQHVVINHNDNQYEGDGSDGLDDDQVTLLGEPR----RVGHGVVRGRGTKK-----R

Query:  KAAKRNKELEAHI
        +A + N +++ ++
Subjt:  KAAKRNKELEAHI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAATCAAAATGATGAAGTACGATTAAGAGAGGCACAACAAGGAGTTATTGCACGGATGATTAGTAGTATGGAAGCATTGACAGATCGTTTGGATAGGTTGGAGAT
TGAAAATCGGGCAAGAGAAAGAATGCTACCTTCTCTAGCACAACATGTGGTAATTAACCATAATGACAACCAATATGAGGGTGATGGTTCTGATGGTTTAGACGATGACC
AAGTTACATTACTTGGGGAGCCAAGACGTGTGGGACATGGAGTAGTCAGAGGAAGAGGCACTAAGAAGCGTAAAGCTGCCAAGAGAAACAAGGAATTGGAAGCTCATATC
AACCCTTCTCAAGGTATCTCGAGGTTTATGTTCAAGCACAAAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACAATCAAAATGATGAAGTACGATTAAGAGAGGCACAACAAGGAGTTATTGCACGGATGATTAGTAGTATGGAAGCATTGACAGATCGTTTGGATAGGTTGGAGAT
TGAAAATCGGGCAAGAGAAAGAATGCTACCTTCTCTAGCACAACATGTGGTAATTAACCATAATGACAACCAATATGAGGGTGATGGTTCTGATGGTTTAGACGATGACC
AAGTTACATTACTTGGGGAGCCAAGACGTGTGGGACATGGAGTAGTCAGAGGAAGAGGCACTAAGAAGCGTAAAGCTGCCAAGAGAAACAAGGAATTGGAAGCTCATATC
AACCCTTCTCAAGGTATCTCGAGGTTTATGTTCAAGCACAAAATTTGA
Protein sequenceShow/hide protein sequence
MDNQNDEVRLREAQQGVIARMISSMEALTDRLDRLEIENRARERMLPSLAQHVVINHNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGTKKRKAAKRNKELEAHI
NPSQGISRFMFKHKI