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PI0026509 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026509
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr10:1300942..1305119
RNA-Seq ExpressionPI0026509
SyntenyPI0026509
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037371.1 gag/pol protein [Cucumis melo var. makuwa]7.5e-2278.67Show/hide
Query:  SVREAHERWVKANEKARAYILARLYEVLVKKHEPMLTTHEIMDSLQVMFGQASYQINHDALKYIYNAHINERALV
        +VREA+ERW KANEKARAYILA L EVL KKHE MLT  EIMDSLQ MFGQ SYQI HDALKYIYNA +NE A V
Subjt:  SVREAHERWVKANEKARAYILARLYEVLVKKHEPMLTTHEIMDSLQVMFGQASYQINHDALKYIYNAHINERALV
KAA0038389.1 gag/pol protein [Cucumis melo var. makuwa]5.8e-2284.06Show/hide
Query:  REAHERWVKANEKARAYILARLYEVLVKKHEPMLTTHEIMDSLQVMFGQASYQINHDALKYIYNAHINE
        REAHERWVKAN+KARAYILA L EVL KKHE MLT HEIMDSLQ MFGQASYQI HDALKYIYNA +N+
Subjt:  REAHERWVKANEKARAYILARLYEVLVKKHEPMLTTHEIMDSLQVMFGQASYQINHDALKYIYNAHINE
KAA0051847.1 gag/pol protein [Cucumis melo var. makuwa]2.0e-2280Show/hide
Query:  SVREAHERWVKANEKARAYILARLYEVLVKKHEPMLTTHEIMDSLQVMFGQASYQINHDALKYIYNAHINERALV
        +VREA+ERW KANEKARAYILA L +VL KKHE MLTT EIMDSLQ MFGQASYQI HDALKYIYNA +NE A V
Subjt:  SVREAHERWVKANEKARAYILARLYEVLVKKHEPMLTTHEIMDSLQVMFGQASYQINHDALKYIYNAHINERALV
TYJ97005.1 gag/pol protein [Cucumis melo var. makuwa]5.8e-2284.06Show/hide
Query:  REAHERWVKANEKARAYILARLYEVLVKKHEPMLTTHEIMDSLQVMFGQASYQINHDALKYIYNAHINE
        REAHERWVKAN+KARAYILA L EVL KKHE MLT HEIMDSLQ MFGQASYQI HDALKYIYNA +N+
Subjt:  REAHERWVKANEKARAYILARLYEVLVKKHEPMLTTHEIMDSLQVMFGQASYQINHDALKYIYNAHINE
XP_008464721.1 PREDICTED: uncharacterized protein LOC103502537 [Cucumis melo]2.0e-2280Show/hide
Query:  SVREAHERWVKANEKARAYILARLYEVLVKKHEPMLTTHEIMDSLQVMFGQASYQINHDALKYIYNAHINERALV
        +VREA+ERW KANEKARAYILA L +VL KKHE MLTT EIMDSLQ MFGQASYQI HDALKYIYNA +NE A V
Subjt:  SVREAHERWVKANEKARAYILARLYEVLVKKHEPMLTTHEIMDSLQVMFGQASYQINHDALKYIYNAHINERALV
TrEMBL top hitse value%identityAlignment
A0A1S3CM79 uncharacterized protein LOC1035025379.6e-2380Show/hide
Query:  SVREAHERWVKANEKARAYILARLYEVLVKKHEPMLTTHEIMDSLQVMFGQASYQINHDALKYIYNAHINERALV
        +VREA+ERW KANEKARAYILA L +VL KKHE MLTT EIMDSLQ MFGQASYQI HDALKYIYNA +NE A V
Subjt:  SVREAHERWVKANEKARAYILARLYEVLVKKHEPMLTTHEIMDSLQVMFGQASYQINHDALKYIYNAHINERALV
A0A5A7T706 Gag/pol protein3.6e-2278.67Show/hide
Query:  SVREAHERWVKANEKARAYILARLYEVLVKKHEPMLTTHEIMDSLQVMFGQASYQINHDALKYIYNAHINERALV
        +VREA+ERW KANEKARAYILA L EVL KKHE MLT  EIMDSLQ MFGQ SYQI HDALKYIYNA +NE A V
Subjt:  SVREAHERWVKANEKARAYILARLYEVLVKKHEPMLTTHEIMDSLQVMFGQASYQINHDALKYIYNAHINERALV
A0A5A7TAL1 Gag/pol protein2.8e-2284.06Show/hide
Query:  REAHERWVKANEKARAYILARLYEVLVKKHEPMLTTHEIMDSLQVMFGQASYQINHDALKYIYNAHINE
        REAHERWVKAN+KARAYILA L EVL KKHE MLT HEIMDSLQ MFGQASYQI HDALKYIYNA +N+
Subjt:  REAHERWVKANEKARAYILARLYEVLVKKHEPMLTTHEIMDSLQVMFGQASYQINHDALKYIYNAHINE
A0A5A7UBR0 Gag/pol protein9.6e-2380Show/hide
Query:  SVREAHERWVKANEKARAYILARLYEVLVKKHEPMLTTHEIMDSLQVMFGQASYQINHDALKYIYNAHINERALV
        +VREA+ERW KANEKARAYILA L +VL KKHE MLTT EIMDSLQ MFGQASYQI HDALKYIYNA +NE A V
Subjt:  SVREAHERWVKANEKARAYILARLYEVLVKKHEPMLTTHEIMDSLQVMFGQASYQINHDALKYIYNAHINERALV
A0A5D3BEX9 Gag/pol protein2.8e-2284.06Show/hide
Query:  REAHERWVKANEKARAYILARLYEVLVKKHEPMLTTHEIMDSLQVMFGQASYQINHDALKYIYNAHINE
        REAHERWVKAN+KARAYILA L EVL KKHE MLT HEIMDSLQ MFGQASYQI HDALKYIYNA +N+
Subjt:  REAHERWVKANEKARAYILARLYEVLVKKHEPMLTTHEIMDSLQVMFGQASYQINHDALKYIYNAHINE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGTAATGGAAGCGACCAACTTTCTAACGCTACAAATGATCAATTGGTTAACAATGTTGCTACTAACCCAATTGGATCTTCACCTCCGGTTGATAAAAAGAACAA
TTGTATGCCTAAGAATTGTTCGCAAGGTAATGCAAAGTGGGGTCTGACGAATGGAAATAGAGCATTTGTTATATGTCGCAAAGGAAGTAAAGAGAGAAGAGTTGGCGTAG
TGGTCTATCGCGAGAAGAGGAAGGCAAAGAAGGTTTGGCTCTTCGAGAGGATAAGAAATTACGTAGAGAACTCTGTTCGAGAAGCACATGAGCGTTGGGTCAAGGCAAAT
GAAAAAGCCCGAGCATACATCTTGGCAAGGTTGTATGAAGTATTGGTCAAGAAACATGAACCAATGCTCACTACTCATGAGATCATGGACTCCTTGCAGGTGATGTTTGG
TCAGGCCTCTTATCAAATCAATCATGATGCTCTGAAATACATTTATAATGCCCATATAAACGAGAGAGCCTTAGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGTAATGGAAGCGACCAACTTTCTAACGCTACAAATGATCAATTGGTTAACAATGTTGCTACTAACCCAATTGGATCTTCACCTCCGGTTGATAAAAAGAACAA
TTGTATGCCTAAGAATTGTTCGCAAGGTAATGCAAAGTGGGGTCTGACGAATGGAAATAGAGCATTTGTTATATGTCGCAAAGGAAGTAAAGAGAGAAGAGTTGGCGTAG
TGGTCTATCGCGAGAAGAGGAAGGCAAAGAAGGTTTGGCTCTTCGAGAGGATAAGAAATTACGTAGAGAACTCTGTTCGAGAAGCACATGAGCGTTGGGTCAAGGCAAAT
GAAAAAGCCCGAGCATACATCTTGGCAAGGTTGTATGAAGTATTGGTCAAGAAACATGAACCAATGCTCACTACTCATGAGATCATGGACTCCTTGCAGGTGATGTTTGG
TCAGGCCTCTTATCAAATCAATCATGATGCTCTGAAATACATTTATAATGCCCATATAAACGAGAGAGCCTTAGTGTGA
Protein sequenceShow/hide protein sequence
MEGNGSDQLSNATNDQLVNNVATNPIGSSPPVDKKNNCMPKNCSQGNAKWGLTNGNRAFVICRKGSKERRVGVVVYREKRKAKKVWLFERIRNYVENSVREAHERWVKAN
EKARAYILARLYEVLVKKHEPMLTTHEIMDSLQVMFGQASYQINHDALKYIYNAHINERALV