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PI0026522 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026522
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionarabinogalactan peptide 13-like
Genome locationchr02:3150476..3151040
RNA-Seq ExpressionPI0026522
SyntenyPI0026522
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0031225 - anchored component of membrane (cellular component)
InterPro domainsIPR039281 - Arabinogalactan protein 3/12/13/14/21


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653471.1 hypothetical protein Csa_007150 [Cucumis sativus]2.7e-1185.19Show/hide
Query:  AKKFQGLMITIMVVVLMAISSPS-IVAAQEAPAPSPTSDASISIPTLMASFVPL
        AK+FQGLM+T+MVVVL+AISS S IVAAQEAPAPSP SDAS+SIPTLMASFVPL
Subjt:  AKKFQGLMITIMVVVLMAISSPS-IVAAQEAPAPSPTSDASISIPTLMASFVPL
KAG7022018.1 Arabinogalactan peptide 14, partial [Cucurbita argyrosperma subsp. argyrosperma]5.2e-0766.67Show/hide
Query:  MEAKKFQGLMITIMVVVLMAISSPSIVAAQEAPAPSPTSDASISIPTLMASFVPLILDYF
        M A KF+ LM+  MVV +MA SS SIVAAQEAPAPSP SDA +S+PTLMAS  PL+L +F
Subjt:  MEAKKFQGLMITIMVVVLMAISSPSIVAAQEAPAPSPTSDASISIPTLMASFVPLILDYF
KAG7023913.1 Arabinogalactan peptide 14, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-0770Show/hide
Query:  MEAKKFQGLMITIMVVVLMAISSPSIVAAQEAPAPSPTSDASISIPTLMASFVPLILDYF
        MEA KFQ LM+  MVV  MA+SS +IVAAQEAPAPSP SDAS+S+PTLMAS  PL L +F
Subjt:  MEAKKFQGLMITIMVVVLMAISSPSIVAAQEAPAPSPTSDASISIPTLMASFVPLILDYF
XP_011660059.1 arabinogalactan protein 13 [Cucumis sativus]3.2e-1279.66Show/hide
Query:  AKKFQGLMITIMVVVLMAISSPS-IVAAQEAPAPSPTSDASISIPTLMASFVPLILDYF
        AK+FQGLM+T+MVVVL+AISS S IVAAQEAPAPSP SDAS+SIPTLMASFVPL+  +F
Subjt:  AKKFQGLMITIMVVVLMAISSPS-IVAAQEAPAPSPTSDASISIPTLMASFVPLILDYF
XP_038879727.1 arabinogalactan protein 13-like [Benincasa hispida]7.8e-1175Show/hide
Query:  MEAKKFQGLMITIMVVVLMAISSPSIVAAQEAPAPSPTSDASISIPTLMASFVPLILDYF
        MEA K Q LM+ IMVVVLMA SS SIVAAQEAPAPSP SDA IS+PTLMAS  PL+L +F
Subjt:  MEAKKFQGLMITIMVVVLMAISSPSIVAAQEAPAPSPTSDASISIPTLMASFVPLILDYF
TrEMBL top hitse value%identityAlignment
A0A0A0LWU9 Uncharacterized protein1.5e-1279.66Show/hide
Query:  AKKFQGLMITIMVVVLMAISSPS-IVAAQEAPAPSPTSDASISIPTLMASFVPLILDYF
        AK+FQGLM+T+MVVVL+AISS S IVAAQEAPAPSP SDAS+SIPTLMASFVPL+  +F
Subjt:  AKKFQGLMITIMVVVLMAISSPS-IVAAQEAPAPSPTSDASISIPTLMASFVPLILDYF
A0A6J1JCI6 arabinogalactan peptide 13-like4.3e-0768.33Show/hide
Query:  MEAKKFQGLMITIMVVVLMAISSPSIVAAQEAPAPSPTSDASISIPTLMASFVPLILDYF
        MEA KFQ LM+  MVV  MA+SS +IVAAQEAPAPSP SDA +S+PTLMAS  PL L +F
Subjt:  MEAKKFQGLMITIMVVVLMAISSPSIVAAQEAPAPSPTSDASISIPTLMASFVPLILDYF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13520.1 arabinogalactan protein 129.9e-0448.21Show/hide
Query:  MEAKKFQGLMITIMVVVLMAISSPSIVAAQ-EAPAPSPTSDASISIPTLMASFVPL
        ME+ K +  +I +++V ++A S+   VAAQ EAPAPSPTSDA++ +P L AS   L
Subjt:  MEAKKFQGLMITIMVVVLMAISSPSIVAAQ-EAPAPSPTSDASISIPTLMASFVPL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCAAAGAAATTTCAAGGTTTAATGATAACAATAATGGTGGTTGTTCTAATGGCTATTTCATCACCCTCCATTGTTGCAGCTCAAGAAGCTCCAGCTCCAAGCCC
AACTTCTGATGCCTCTATTTCTATTCCAACTTTAATGGCTTCTTTTGTTCCTCTTATTTTGGATTATTTTTCATCTAAATATTCTTCCCTTTCTTTTTCCTTTTTTTCTT
TTTTCCTTTATTTTTTTAATTACCATTTATATATTGTAATTCCCTATGGATATATAAATATGTGTGTGTGTGTGTGTTTTTTTTAA
mRNA sequenceShow/hide mRNA sequence
AAAAAATAAGAGAAACCCCATTTGAAAAATCCTCAAAATTAAAGCTTTAAGGATATTTTCATCAATGGAAGCAAAGAAATTTCAAGGTTTAATGATAACAATAATGGTGG
TTGTTCTAATGGCTATTTCATCACCCTCCATTGTTGCAGCTCAAGAAGCTCCAGCTCCAAGCCCAACTTCTGATGCCTCTATTTCTATTCCAACTTTAATGGCTTCTTTT
GTTCCTCTTATTTTGGATTATTTTTCATCTAAATATTCTTCCCTTTCTTTTTCCTTTTTTTCTTTTTTCCTTTATTTTTTTAATTACCATTTATATATTGTAATTCCCTA
TGGATATATAAATATGTGTGTGTGTGTGTGTTTTTTTTAAACCCATTTTGTTCATTTTTTTTATTTCTATAGAAATTTTATGAAATGTCTGTGAAGGAAAGGAATGGAGA
GGTGGGTTGTTTTTTTTCTTTTTTTTTTTAGGGGGTGATGATTGAATTTGTTTGGGTGTGATTTGGGATTATTATTAATTTATGTATATTTCTCCATATTTAATGTTATG
TTGTTATTATTATTA
Protein sequenceShow/hide protein sequence
MEAKKFQGLMITIMVVVLMAISSPSIVAAQEAPAPSPTSDASISIPTLMASFVPLILDYFSSKYSSLSFSFFSFFLYFFNYHLYIVIPYGYINMCVCVCFF