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PI0026586 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026586
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr07:18859790..18862143
RNA-Seq ExpressionPI0026586
SyntenyPI0026586
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0010073 - meristem maintenance (biological process)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.5e-2647.24Show/hide
Query:  ATHVVSQYRYMFDLLQRDQ------------------------------------------------------------------------RSNNRRLRD
        ATHVVSQYRYMFDLLQRDQ                                                                        RSNN RLRD
Subjt:  ATHVVSQYRYMFDLLQRDQ------------------------------------------------------------------------RSNNRRLRD

Query:  VVDDPQQVLDICNNNERYMKKIHYMYDVPIVTPPVNKGRVRVEEPELDEVYHNVEEVPPVTQT
        V DDPQQVL+ICNNN+RYM++IH MYD+ IV PPV++GRVRVEE ELDEVYHNVEEVPP TQT
Subjt:  VVDDPQQVLDICNNNERYMKKIHYMYDVPIVTPPVNKGRVRVEEPELDEVYHNVEEVPPVTQT

KAA0064245.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]1.4e-2479.17Show/hide
Query:  RSNNRRLRDVVDDPQQVLDICNNNERYMKKIHYMYDVPIVTPPVNKGRVRVEEPELDEVYHNVEEVPPVTQT
        RSNN RLRDV DDPQQVLDICNNNERYM++IH MYD+PIV  P+++GR+RVEE ELDEVYHNVEEVPP T+T
Subjt:  RSNNRRLRDVVDDPQQVLDICNNNERYMKKIHYMYDVPIVTPPVNKGRVRVEEPELDEVYHNVEEVPPVTQT

TYK01176.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]2.4e-2466.33Show/hide
Query:  MFDLLQRDQ-----------------RSNNRRLRDVVDDPQQVLDICNNNERYMKKIHYMYDVPIVTPPVNKGRVRVEEPELDEVYHNVEEVPPVTQT
        MFDLLQRDQ                 RSNN RLRDV DD QQ LDICNNNERYM++IH MYD+PIV PPV++G VRVEE ELD+VYHNVEEVP  TQT
Subjt:  MFDLLQRDQ-----------------RSNNRRLRDVVDDPQQVLDICNNNERYMKKIHYMYDVPIVTPPVNKGRVRVEEPELDEVYHNVEEVPPVTQT

TYK11193.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.1e-2646.71Show/hide
Query:  GEGSATHVVSQYRYMFDLLQRDQ------------------------------------------------------------------------RSNNR
        G   ATHVVSQYRYMFDLLQRDQ                                                                        RSNN 
Subjt:  GEGSATHVVSQYRYMFDLLQRDQ------------------------------------------------------------------------RSNNR

Query:  RLRDVVDDPQQVLDICNNNERYMKKIHYMYDVPIVTPPVNKGRVRVEEPELDEVYHNVEEVPPVTQT
        RLRDV DDPQQVL+ICNNN+RYM++IH MYD+ IV PPV++GRVRVEE ELDEVYHNVEEVPP TQT
Subjt:  RLRDVVDDPQQVLDICNNNERYMKKIHYMYDVPIVTPPVNKGRVRVEEPELDEVYHNVEEVPPVTQT

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]8.1e-2581.94Show/hide
Query:  RSNNRRLRDVVDDPQQVLDICNNNERYMKKIHYMYDVPIVTPPVNKGRVRVEEPELDEVYHNVEEVPPVTQT
        RSNN RLRDVV+DPQQVLDICNNNERYM+KIH +YD+PIV PPV++ R RVEE ELDEVYHNVEEVPP TQT
Subjt:  RSNNRRLRDVVDDPQQVLDICNNNERYMKKIHYMYDVPIVTPPVNKGRVRVEEPELDEVYHNVEEVPPVTQT

TrEMBL top hitse value%identityAlignment
A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.2e-2647.24Show/hide
Query:  ATHVVSQYRYMFDLLQRDQ------------------------------------------------------------------------RSNNRRLRD
        ATHVVSQYRYMFDLLQRDQ                                                                        RSNN RLRD
Subjt:  ATHVVSQYRYMFDLLQRDQ------------------------------------------------------------------------RSNNRRLRD

Query:  VVDDPQQVLDICNNNERYMKKIHYMYDVPIVTPPVNKGRVRVEEPELDEVYHNVEEVPPVTQT
        V DDPQQVL+ICNNN+RYM++IH MYD+ IV PPV++GRVRVEE ELDEVYHNVEEVPP TQT
Subjt:  VVDDPQQVLDICNNNERYMKKIHYMYDVPIVTPPVNKGRVRVEEPELDEVYHNVEEVPPVTQT

A0A5A7VEC1 GATA zinc finger domain-containing protein 10-like isoform X26.7e-2579.17Show/hide
Query:  RSNNRRLRDVVDDPQQVLDICNNNERYMKKIHYMYDVPIVTPPVNKGRVRVEEPELDEVYHNVEEVPPVTQT
        RSNN RLRDV DDPQQVLDICNNNERYM++IH MYD+PIV  P+++GR+RVEE ELDEVYHNVEEVPP T+T
Subjt:  RSNNRRLRDVVDDPQQVLDICNNNERYMKKIHYMYDVPIVTPPVNKGRVRVEEPELDEVYHNVEEVPPVTQT

A0A5D3BSG8 GATA zinc finger domain-containing protein 10-like isoform X21.1e-2466.33Show/hide
Query:  MFDLLQRDQ-----------------RSNNRRLRDVVDDPQQVLDICNNNERYMKKIHYMYDVPIVTPPVNKGRVRVEEPELDEVYHNVEEVPPVTQT
        MFDLLQRDQ                 RSNN RLRDV DD QQ LDICNNNERYM++IH MYD+PIV PPV++G VRVEE ELD+VYHNVEEVP  TQT
Subjt:  MFDLLQRDQ-----------------RSNNRRLRDVVDDPQQVLDICNNNERYMKKIHYMYDVPIVTPPVNKGRVRVEEPELDEVYHNVEEVPPVTQT

A0A5D3CH23 Mediator of RNA polymerase II transcription subunit 12-like isoform X15.5e-2746.71Show/hide
Query:  GEGSATHVVSQYRYMFDLLQRDQ------------------------------------------------------------------------RSNNR
        G   ATHVVSQYRYMFDLLQRDQ                                                                        RSNN 
Subjt:  GEGSATHVVSQYRYMFDLLQRDQ------------------------------------------------------------------------RSNNR

Query:  RLRDVVDDPQQVLDICNNNERYMKKIHYMYDVPIVTPPVNKGRVRVEEPELDEVYHNVEEVPPVTQT
        RLRDV DDPQQVL+ICNNN+RYM++IH MYD+ IV PPV++GRVRVEE ELDEVYHNVEEVPP TQT
Subjt:  RLRDVVDDPQQVLDICNNNERYMKKIHYMYDVPIVTPPVNKGRVRVEEPELDEVYHNVEEVPPVTQT

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein3.9e-2581.94Show/hide
Query:  RSNNRRLRDVVDDPQQVLDICNNNERYMKKIHYMYDVPIVTPPVNKGRVRVEEPELDEVYHNVEEVPPVTQT
        RSNN RLRDVV+DPQQVLDICNNNERYM+KIH +YD+PIV PPV++ R RVEE ELDEVYHNVEEVPP TQT
Subjt:  RSNNRRLRDVVDDPQQVLDICNNNERYMKKIHYMYDVPIVTPPVNKGRVRVEEPELDEVYHNVEEVPPVTQT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATGGCAGGTGGGTTGGTGTGGATTATGCGAACTCAATTTCTAGGCGATGGTGAAGGATCAGCTACTCATGTAGTTAGTCAATATAGGTACATGTTTGATCTTCT
TCAGCGTGATCAGAGATCGAACAACAGAAGACTTCGTGATGTTGTAGATGATCCACAACAAGTCCTTGATATATGTAATAATAATGAGAGGTACATGAAGAAGATACATT
ATATGTATGATGTACCTATTGTAACTCCACCAGTTAACAAGGGACGTGTTCGAGTGGAAGAACCTGAACTCGATGAAGTTTACCATAACGTAGAAGAAGTACCTCCAGTG
ACACAAACATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATATGGCAGGTGGGTTGGTGTGGATTATGCGAACTCAATTTCTAGGCGATGGTGAAGGATCAGCTACTCATGTAGTTAGTCAATATAGGTACATGTTTGATCTTCT
TCAGCGTGATCAGAGATCGAACAACAGAAGACTTCGTGATGTTGTAGATGATCCACAACAAGTCCTTGATATATGTAATAATAATGAGAGGTACATGAAGAAGATACATT
ATATGTATGATGTACCTATTGTAACTCCACCAGTTAACAAGGGACGTGTTCGAGTGGAAGAACCTGAACTCGATGAAGTTTACCATAACGTAGAAGAAGTACCTCCAGTG
ACACAAACATAG
Protein sequenceShow/hide protein sequence
MDMAGGLVWIMRTQFLGDGEGSATHVVSQYRYMFDLLQRDQRSNNRRLRDVVDDPQQVLDICNNNERYMKKIHYMYDVPIVTPPVNKGRVRVEEPELDEVYHNVEEVPPV
TQT