; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0026587 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026587
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr12:15788186..15788788
RNA-Seq ExpressionPI0026587
SyntenyPI0026587
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041264.1 hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa]5.9e-2638.5Show/hide
Query:  VVKKFYSAKLNAEEFSVEISGRTVSFNVGAINNLYELPNNVETPGHEYVVSPMKKMAREALDVIAWPGAAWEITPTGKYQLYPYQLTTEAGVWLFFIKKK
        VV  FY A +N EE   E+  + V F   AIN LY L NN    GH    +P  +  ++AL+ I WPG  W+  PT KYQL+P  L TE  VWL FIKK 
Subjt:  VVKKFYSAKLNAEEFSVEISGRTVSFNVGAINNLYELPNNVETPGHEYVVSPMKKMAREALDVIAWPGAAWEITPTGKYQLYPYQLTTEAGVWLFFIKKK

Query:  IFPTRHDNTINLKSAMLLYCIMTKKRINLGDLIATSILSWMRALKGAMPFPSTVEALCVKVVPFLCTMNTMPIPGGLCNQMSLNHMI
        I PTRHD+TI+++  MLLY      + N  ++    +++W++   GA PF    + L +K  P L     + +  G+C   +L+  I
Subjt:  IFPTRHDNTINLKSAMLLYCIMTKKRINLGDLIATSILSWMRALKGAMPFPSTVEALCVKVVPFLCTMNTMPIPGGLCNQMSLNHMI

KAA0049609.1 transposase [Cucumis melo var. makuwa]1.5e-2948.95Show/hide
Query:  ISGRTVSFNVGAINNLYELPNNVET-PGHEYVVSPMKKMAREALDVIAWPGAAWEITPTGKYQLYPYQLTTEAGVWLFFIKKKIFPTRHDNTINLKSAML
        +    V F    IN LY+LPN++   PG   +V   +  A++ + +I WP A    TPT + QL+P+QLT EA VWLFFIKKKIFPT HD+TI  + A++
Subjt:  ISGRTVSFNVGAINNLYELPNNVET-PGHEYVVSPMKKMAREALDVIAWPGAAWEITPTGKYQLYPYQLTTEAGVWLFFIKKKIFPTRHDNTINLKSAML

Query:  LYCIMTKKRINLGDLIATSILSWMRALKGAMPFPSTVEALCVK
        LYCI  KK  NLG ++  + LSWMR  K A PFP+TV+ LC+K
Subjt:  LYCIMTKKRINLGDLIATSILSWMRALKGAMPFPSTVEALCVK

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]1.9e-3745.32Show/hide
Query:  MGVVKKFYSAKLNAEEFSVEISGRTVSFNVGAINNLYELPNNVETPGHEYVVSPMKKMAREALDVIAWPGAAWEITPTG-KYQLYPYQLTTEAGVWLFFI
        M VV KFY  K N  +  + I      FNV  IN LY  PN+ E  G E V    K +A+EAL V+AWPG   E+ P   +YQLYP+ LTT+A VW+FF 
Subjt:  MGVVKKFYSAKLNAEEFSVEISGRTVSFNVGAINNLYELPNNVETPGHEYVVSPMKKMAREALDVIAWPGAAWEITPTG-KYQLYPYQLTTEAGVWLFFI

Query:  KKKIFPTRHDNTINLKSAMLLYCIMTKKRINLGDLIATSILSWMRALKGAMPFPSTVEALCVKVVPFLCTMNTMPIP---------GGL----CNQMSLN
        K KIFPT +D+TI++   ++LYCIM KK INL ++I  +IL+WM   K AMPFPS +E LC+K +P L       IP          GL    C+  S +
Subjt:  KKKIFPTRHDNTINLKSAMLLYCIMTKKRINLGDLIATSILSWMRALKGAMPFPSTVEALCVKVVPFLCTMNTMPIP---------GGL----CNQMSLN

Query:  HMI
        H+I
Subjt:  HMI

TYK15967.1 hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]1.5e-2948.95Show/hide
Query:  ISGRTVSFNVGAINNLYELPNNVET-PGHEYVVSPMKKMAREALDVIAWPGAAWEITPTGKYQLYPYQLTTEAGVWLFFIKKKIFPTRHDNTINLKSAML
        +    V F    IN LY+LPN++   PG   +V   +  A++ + +I WP A    TPT + QL+P+QLT EA VWLFFIKKKIFPT HD+TI  + A++
Subjt:  ISGRTVSFNVGAINNLYELPNNVET-PGHEYVVSPMKKMAREALDVIAWPGAAWEITPTGKYQLYPYQLTTEAGVWLFFIKKKIFPTRHDNTINLKSAML

Query:  LYCIMTKKRINLGDLIATSILSWMRALKGAMPFPSTVEALCVK
        LYCI  KK  NLG ++  + LSWMR  K A PFP+TV+ LC+K
Subjt:  LYCIMTKKRINLGDLIATSILSWMRALKGAMPFPSTVEALCVK

TYK22187.1 hypothetical protein E5676_scaffold333G00570 [Cucumis melo var. makuwa]3.8e-2544.52Show/hide
Query:  FYSAKLNAEEFSVEISGRTVSFNVGAINNLYELPNNVET-PGHEYVVSPMKKMAREALDVIAWPGAAWEITPTGKYQLYPYQLTTEAGVWLFFIKKKIFP
        FY+AK ++ E  V +  + VSF +  IN LY L N++++ P    +  P K  +R  + +IAW GA W  T T   QLYP+QLTTEA VWL FIKKKI P
Subjt:  FYSAKLNAEEFSVEISGRTVSFNVGAINNLYELPNNVET-PGHEYVVSPMKKMAREALDVIAWPGAAWEITPTGKYQLYPYQLTTEAGVWLFFIKKKIFP

Query:  TRHDNTINLKSAMLLYCIMTKKRINLGDLIATSILSWMRALKGAMP
          +D+T+ ++  +LLYC M K+  NLG ++  + L  MR  KGA P
Subjt:  TRHDNTINLKSAMLLYCIMTKKRINLGDLIATSILSWMRALKGAMP

TrEMBL top hitse value%identityAlignment
A0A5A7U806 Transposase7.2e-3048.95Show/hide
Query:  ISGRTVSFNVGAINNLYELPNNVET-PGHEYVVSPMKKMAREALDVIAWPGAAWEITPTGKYQLYPYQLTTEAGVWLFFIKKKIFPTRHDNTINLKSAML
        +    V F    IN LY+LPN++   PG   +V   +  A++ + +I WP A    TPT + QL+P+QLT EA VWLFFIKKKIFPT HD+TI  + A++
Subjt:  ISGRTVSFNVGAINNLYELPNNVET-PGHEYVVSPMKKMAREALDVIAWPGAAWEITPTGKYQLYPYQLTTEAGVWLFFIKKKIFPTRHDNTINLKSAML

Query:  LYCIMTKKRINLGDLIATSILSWMRALKGAMPFPSTVEALCVK
        LYCI  KK  NLG ++  + LSWMR  K A PFP+TV+ LC+K
Subjt:  LYCIMTKKRINLGDLIATSILSWMRALKGAMPFPSTVEALCVK

A0A5A7V6M5 Gag/pol protein9.4e-3845.32Show/hide
Query:  MGVVKKFYSAKLNAEEFSVEISGRTVSFNVGAINNLYELPNNVETPGHEYVVSPMKKMAREALDVIAWPGAAWEITPTG-KYQLYPYQLTTEAGVWLFFI
        M VV KFY  K N  +  + I      FNV  IN LY  PN+ E  G E V    K +A+EAL V+AWPG   E+ P   +YQLYP+ LTT+A VW+FF 
Subjt:  MGVVKKFYSAKLNAEEFSVEISGRTVSFNVGAINNLYELPNNVETPGHEYVVSPMKKMAREALDVIAWPGAAWEITPTG-KYQLYPYQLTTEAGVWLFFI

Query:  KKKIFPTRHDNTINLKSAMLLYCIMTKKRINLGDLIATSILSWMRALKGAMPFPSTVEALCVKVVPFLCTMNTMPIP---------GGL----CNQMSLN
        K KIFPT +D+TI++   ++LYCIM KK INL ++I  +IL+WM   K AMPFPS +E LC+K +P L       IP          GL    C+  S +
Subjt:  KKKIFPTRHDNTINLKSAMLLYCIMTKKRINLGDLIATSILSWMRALKGAMPFPSTVEALCVKVVPFLCTMNTMPIP---------GGL----CNQMSLN

Query:  HMI
        H+I
Subjt:  HMI

A0A5D3CVL7 Uncharacterized protein7.2e-3048.95Show/hide
Query:  ISGRTVSFNVGAINNLYELPNNVET-PGHEYVVSPMKKMAREALDVIAWPGAAWEITPTGKYQLYPYQLTTEAGVWLFFIKKKIFPTRHDNTINLKSAML
        +    V F    IN LY+LPN++   PG   +V   +  A++ + +I WP A    TPT + QL+P+QLT EA VWLFFIKKKIFPT HD+TI  + A++
Subjt:  ISGRTVSFNVGAINNLYELPNNVET-PGHEYVVSPMKKMAREALDVIAWPGAAWEITPTGKYQLYPYQLTTEAGVWLFFIKKKIFPTRHDNTINLKSAML

Query:  LYCIMTKKRINLGDLIATSILSWMRALKGAMPFPSTVEALCVK
        LYCI  KK  NLG ++  + LSWMR  K A PFP+TV+ LC+K
Subjt:  LYCIMTKKRINLGDLIATSILSWMRALKGAMPFPSTVEALCVK

A0A5D3CW17 Uncharacterized protein2.8e-2638.5Show/hide
Query:  VVKKFYSAKLNAEEFSVEISGRTVSFNVGAINNLYELPNNVETPGHEYVVSPMKKMAREALDVIAWPGAAWEITPTGKYQLYPYQLTTEAGVWLFFIKKK
        VV  FY A +N EE   E+  + V F   AIN LY L NN    GH    +P  +  ++AL+ I WPG  W+  PT KYQL+P  L TE  VWL FIKK 
Subjt:  VVKKFYSAKLNAEEFSVEISGRTVSFNVGAINNLYELPNNVETPGHEYVVSPMKKMAREALDVIAWPGAAWEITPTGKYQLYPYQLTTEAGVWLFFIKKK

Query:  IFPTRHDNTINLKSAMLLYCIMTKKRINLGDLIATSILSWMRALKGAMPFPSTVEALCVKVVPFLCTMNTMPIPGGLCNQMSLNHMI
        I PTRHD+TI+++  MLLY      + N  ++    +++W++   GA PF    + L +K  P L     + +  G+C   +L+  I
Subjt:  IFPTRHDNTINLKSAMLLYCIMTKKRINLGDLIATSILSWMRALKGAMPFPSTVEALCVKVVPFLCTMNTMPIPGGLCNQMSLNHMI

A0A5D3D2B5 Uncharacterized protein1.8e-2534.97Show/hide
Query:  FYSAKLNAEEFSVEISGRTVSFNVGAINNLYELPNNVETPGHEYVVSPMKKMAREALDVIAWPGAAWEITPTGKYQLYPYQLTTEAGVWLFFIKKKIFPT
        FY   +N EE    + G  V F +  IN  + L  N    GH    +P ++    AL  +AW G  W+IT T +Y L+ + L  E  +WL F KKKI PT
Subjt:  FYSAKLNAEEFSVEISGRTVSFNVGAINNLYELPNNVETPGHEYVVSPMKKMAREALDVIAWPGAAWEITPTGKYQLYPYQLTTEAGVWLFFIKKKIFPT

Query:  RHDNTINLKSAMLLYCIMTKKRINLGDLIATSILSWMRALKGAMPFPSTVEALCVKVVPFLCTMNTMPIPGGLCNQMSLNHMI
        RHD  I+++  ML+YCIM +  +N+G++I+  I++W++ L GA PF   +E   +K    L  +  + +  G+    +L+H+I
Subjt:  RHDNTINLKSAMLLYCIMTKKRINLGDLIATSILSWMRALKGAMPFPSTVEALCVKVVPFLCTMNTMPIPGGLCNQMSLNHMI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGTGGTGAAAAAATTTTACTCCGCTAAACTCAATGCAGAGGAGTTTAGCGTAGAAATAAGTGGAAGGACGGTGAGCTTCAACGTAGGGGCCATCAACAATTTATA
TGAGTTGCCCAACAATGTTGAAACGCCTGGGCACGAATACGTGGTCAGTCCAATGAAGAAAATGGCCCGTGAAGCGTTGGACGTCATTGCCTGGCCTGGGGCCGCATGGG
AAATTACGCCTACAGGGAAGTATCAACTTTATCCATACCAGCTAACCACAGAGGCAGGTGTGTGGCTCTTCTTCATAAAAAAGAAGATATTCCCTACGCGCCATGATAAC
ACCATTAACTTAAAGTCAGCGATGTTGCTCTACTGCATAATGACGAAGAAGCGCATCAACCTCGGTGATTTGATAGCTACATCTATTCTGTCTTGGATGCGAGCTCTTAA
GGGTGCCATGCCCTTCCCATCTACAGTCGAAGCTCTCTGCGTGAAGGTCGTGCCTTTTCTATGCACCATGAACACAATGCCAATTCCAGGCGGCCTGTGTAATCAAATGT
CTTTGAATCACATGATCGCAAGAAATGGAAAGGCGGTAAAAGACATTGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGTGGTGAAAAAATTTTACTCCGCTAAACTCAATGCAGAGGAGTTTAGCGTAGAAATAAGTGGAAGGACGGTGAGCTTCAACGTAGGGGCCATCAACAATTTATA
TGAGTTGCCCAACAATGTTGAAACGCCTGGGCACGAATACGTGGTCAGTCCAATGAAGAAAATGGCCCGTGAAGCGTTGGACGTCATTGCCTGGCCTGGGGCCGCATGGG
AAATTACGCCTACAGGGAAGTATCAACTTTATCCATACCAGCTAACCACAGAGGCAGGTGTGTGGCTCTTCTTCATAAAAAAGAAGATATTCCCTACGCGCCATGATAAC
ACCATTAACTTAAAGTCAGCGATGTTGCTCTACTGCATAATGACGAAGAAGCGCATCAACCTCGGTGATTTGATAGCTACATCTATTCTGTCTTGGATGCGAGCTCTTAA
GGGTGCCATGCCCTTCCCATCTACAGTCGAAGCTCTCTGCGTGAAGGTCGTGCCTTTTCTATGCACCATGAACACAATGCCAATTCCAGGCGGCCTGTGTAATCAAATGT
CTTTGAATCACATGATCGCAAGAAATGGAAAGGCGGTAAAAGACATTGGGTGA
Protein sequenceShow/hide protein sequence
MGVVKKFYSAKLNAEEFSVEISGRTVSFNVGAINNLYELPNNVETPGHEYVVSPMKKMAREALDVIAWPGAAWEITPTGKYQLYPYQLTTEAGVWLFFIKKKIFPTRHDN
TINLKSAMLLYCIMTKKRINLGDLIATSILSWMRALKGAMPFPSTVEALCVKVVPFLCTMNTMPIPGGLCNQMSLNHMIARNGKAVKDIG