; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0026591 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026591
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr01:17905111..17906315
RNA-Seq ExpressionPI0026591
SyntenyPI0026591
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.2e-5657.08Show/hide
Query:  MAPQLRHANNHLLPRRAHGSRWRDQFCVTRSATH----------------IIWEPYKNVIHNLSNFCKN--DWWDNVAHLVMRWQSRRRFIATGASIQQF
        +APQL HANNHLLP RA GSRW+DQFCVTR ATH                IIWEPYKNVI NL NFCKN  D W  ++ L+            G SIQQF
Subjt:  MAPQLRHANNHLLPRRAHGSRWRDQFCVTRSATH----------------IIWEPYKNVIHNLSNFCKN--DWWDNVAHLVMRWQSRRRFIATGASIQQF

Query:  DRDVTQEYIHWYNNITRLYITRSGAALGHLM-----------------------------IHNKSLIYAIIMRVNRGRVRVEEPELDEVYHNVEEVPPVT
        D DVTQEYIHWYNNITRLYITR  AA+GHL                              IHN   +  +   V+RGRVRVEE ELDEVYHNVEEVPP T
Subjt:  DRDVTQEYIHWYNNITRLYITRSGAALGHLM-----------------------------IHNKSLIYAIIMRVNRGRVRVEEPELDEVYHNVEEVPPVT

Query:  QTQSQTGYGSPMMMIPAFGAGYCDSE
        QTQSQTGYGSPM M+P FGAGY DSE
Subjt:  QTQSQTGYGSPMMMIPAFGAGYCDSE

KAA0041168.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.6e-5060Show/hide
Query:  MAPQLRHANNHLLPRRAHGSRWRDQFCVTRSATH----------------IIWEPYKNVIHNLSNFCKNDWWDNVAHLVMRWQSRRRFIATGASIQQFDR
        +APQL HANNHLLP RA GS  RDQFCVTR ATH                IIWEPYK+VI NL NF    W D VAHLV+RWQSRRRF+A G SIQQFD 
Subjt:  MAPQLRHANNHLLPRRAHGSRWRDQFCVTRSATH----------------IIWEPYKNVIHNLSNFCKNDWWDNVAHLVMRWQSRRRFIATGASIQQFDR

Query:  DVTQEYIHWYNNITRLYITRSGAALGHLMIHNKSLIYAIIMRVNRGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGYGSPMMMIPAFGAGYCDSE
        DVTQEYIHW                                    GRVRVEE ELDEVYHNVEEVPP TQTQSQTGYGSPM M+P FGAGYCDSE
Subjt:  DVTQEYIHWYNNITRLYITRSGAALGHLMIHNKSLIYAIIMRVNRGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGYGSPMMMIPAFGAGYCDSE

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]3.1e-4140.07Show/hide
Query:  MAPQLRHANNHLLPRRAHGSRWRDQFCVTRSATH----------------IIWEPYKNVIHNLSNFCKN-------------------------------
        +APQL H N + L  RA+GSRWRDQFCVTRSATH                I+WEPYK VI +L +FC N                               
Subjt:  MAPQLRHANNHLLPRRAHGSRWRDQFCVTRSATH----------------IIWEPYKNVIHNLSNFCKN-------------------------------

Query:  ----------------------DWWDNVAHLVMRWQSRRRFIATGASIQQFDRDVTQEYIHWYNNITRLYITRSGAALGHLMIHNKSL------------
                              DW D VAHLVMRW +RRRF ATG  I+QFD DVTQEYIHWY NI++LYIT+ GAA+ HL  +N  L            
Subjt:  ----------------------DWWDNVAHLVMRWQSRRRFIATGASIQQFDRDVTQEYIHWYNNITRLYITRSGAALGHLMIHNKSL------------

Query:  -----------------IYAIIMRVNRGRVRVEEP-ELDEVYHNVEEVPPVTQTQSQTGYGSPMMMIPAFGAGYCDS
                         +  +   V R R  V+EP +L+EV  + +EVPP+TQTQS+  Y SP+MM+P FG  Y DS
Subjt:  -----------------IYAIIMRVNRGRVRVEEP-ELDEVYHNVEEVPPVTQTQSQTGYGSPMMMIPAFGAGYCDS

TYK11193.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]8.1e-5055.5Show/hide
Query:  MAPQLRHANNHLLPRRAHGSR--------WRDQFCVTRSATHIIWEPYKNVIHNLSNFCKN--DWWDNVAHLVMRWQSRRRFIATGASIQQFDRDVTQEY
        +APQL HANNHLLP RA GSR        +R  F + +    IIWEPYKNVI NL NFCKN  D W  ++ L+            G SIQQFD DVTQEY
Subjt:  MAPQLRHANNHLLPRRAHGSR--------WRDQFCVTRSATHIIWEPYKNVIHNLSNFCKN--DWWDNVAHLVMRWQSRRRFIATGASIQQFDRDVTQEY

Query:  IHWYNNITRLYITRSGAALGHLM-----------------------------IHNKSLIYAIIMRVNRGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGY
        IHWYNNITRLYITR GAA+GHL                              IHN   +  +   V+RGRVRVEE ELDEVYHNVEEVPP TQTQSQTGY
Subjt:  IHWYNNITRLYITRSGAALGHLM-----------------------------IHNKSLIYAIIMRVNRGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGY

Query:  GSPMMMIPAFGAGYCDSE
        GSPM M+P FGAGY DSE
Subjt:  GSPMMMIPAFGAGYCDSE

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]9.2e-5452.67Show/hide
Query:  MAPQLRHANNHLLPRRAHGSRWRDQFCVTRSATH----------------IIWEPYKNVIHNLSNFCKN--DWWDNVAHLVM----RW------------
        +APQL H N+HLL  RA GSRWRDQFCV RSAT+                IIWEPYK+VI NL NFCKN  D W  ++ L+      W            
Subjt:  MAPQLRHANNHLLPRRAHGSRWRDQFCVTRSATH----------------IIWEPYKNVIHNLSNFCKN--DWWDNVAHLVM----RW------------

Query:  -QSRRRFIATGASIQQFDRDVTQEYIHWYNNITRLYITRSGAALGHL-----------------------------MIHNKSLIYAIIMRVNRGRVRVEE
         +SRRRF+    SIQQFD DVTQEYIH YNNITRLYITR GA +GHL                              IHN   +  +   V+R R RVEE
Subjt:  -QSRRRFIATGASIQQFDRDVTQEYIHWYNNITRLYITRSGAALGHL-----------------------------MIHNKSLIYAIIMRVNRGRVRVEE

Query:  PELDEVYHNVEEVPPVTQTQSQTGYGSPMMMIPAFGAGYCDSE
         ELDEVYHNVEEVPP TQTQSQTGYGSPM M+P FGAGYCDSE
Subjt:  PELDEVYHNVEEVPPVTQTQSQTGYGSPMMMIPAFGAGYCDSE

TrEMBL top hitse value%identityAlignment
A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X15.6e-5757.08Show/hide
Query:  MAPQLRHANNHLLPRRAHGSRWRDQFCVTRSATH----------------IIWEPYKNVIHNLSNFCKN--DWWDNVAHLVMRWQSRRRFIATGASIQQF
        +APQL HANNHLLP RA GSRW+DQFCVTR ATH                IIWEPYKNVI NL NFCKN  D W  ++ L+            G SIQQF
Subjt:  MAPQLRHANNHLLPRRAHGSRWRDQFCVTRSATH----------------IIWEPYKNVIHNLSNFCKN--DWWDNVAHLVMRWQSRRRFIATGASIQQF

Query:  DRDVTQEYIHWYNNITRLYITRSGAALGHLM-----------------------------IHNKSLIYAIIMRVNRGRVRVEEPELDEVYHNVEEVPPVT
        D DVTQEYIHWYNNITRLYITR  AA+GHL                              IHN   +  +   V+RGRVRVEE ELDEVYHNVEEVPP T
Subjt:  DRDVTQEYIHWYNNITRLYITRSGAALGHLM-----------------------------IHNKSLIYAIIMRVNRGRVRVEEPELDEVYHNVEEVPPVT

Query:  QTQSQTGYGSPMMMIPAFGAGYCDSE
        QTQSQTGYGSPM M+P FGAGY DSE
Subjt:  QTQSQTGYGSPMMMIPAFGAGYCDSE

A0A5A7TDY5 Serine/threonine-protein phosphatase 7 long form-like protein7.9e-5160Show/hide
Query:  MAPQLRHANNHLLPRRAHGSRWRDQFCVTRSATH----------------IIWEPYKNVIHNLSNFCKNDWWDNVAHLVMRWQSRRRFIATGASIQQFDR
        +APQL HANNHLLP RA GS  RDQFCVTR ATH                IIWEPYK+VI NL NF    W D VAHLV+RWQSRRRF+A G SIQQFD 
Subjt:  MAPQLRHANNHLLPRRAHGSRWRDQFCVTRSATH----------------IIWEPYKNVIHNLSNFCKNDWWDNVAHLVMRWQSRRRFIATGASIQQFDR

Query:  DVTQEYIHWYNNITRLYITRSGAALGHLMIHNKSLIYAIIMRVNRGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGYGSPMMMIPAFGAGYCDSE
        DVTQEYIHW                                    GRVRVEE ELDEVYHNVEEVPP TQTQSQTGYGSPM M+P FGAGYCDSE
Subjt:  DVTQEYIHWYNNITRLYITRSGAALGHLMIHNKSLIYAIIMRVNRGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGYGSPMMMIPAFGAGYCDSE

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein1.5e-4140.07Show/hide
Query:  MAPQLRHANNHLLPRRAHGSRWRDQFCVTRSATH----------------IIWEPYKNVIHNLSNFCKN-------------------------------
        +APQL H N + L  RA+GSRWRDQFCVTRSATH                I+WEPYK VI +L +FC N                               
Subjt:  MAPQLRHANNHLLPRRAHGSRWRDQFCVTRSATH----------------IIWEPYKNVIHNLSNFCKN-------------------------------

Query:  ----------------------DWWDNVAHLVMRWQSRRRFIATGASIQQFDRDVTQEYIHWYNNITRLYITRSGAALGHLMIHNKSL------------
                              DW D VAHLVMRW +RRRF ATG  I+QFD DVTQEYIHWY NI++LYIT+ GAA+ HL  +N  L            
Subjt:  ----------------------DWWDNVAHLVMRWQSRRRFIATGASIQQFDRDVTQEYIHWYNNITRLYITRSGAALGHLMIHNKSL------------

Query:  -----------------IYAIIMRVNRGRVRVEEP-ELDEVYHNVEEVPPVTQTQSQTGYGSPMMMIPAFGAGYCDS
                         +  +   V R R  V+EP +L+EV  + +EVPP+TQTQS+  Y SP+MM+P FG  Y DS
Subjt:  -----------------IYAIIMRVNRGRVRVEEP-ELDEVYHNVEEVPPVTQTQSQTGYGSPMMMIPAFGAGYCDS

A0A5D3CH23 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.9e-5055.5Show/hide
Query:  MAPQLRHANNHLLPRRAHGSR--------WRDQFCVTRSATHIIWEPYKNVIHNLSNFCKN--DWWDNVAHLVMRWQSRRRFIATGASIQQFDRDVTQEY
        +APQL HANNHLLP RA GSR        +R  F + +    IIWEPYKNVI NL NFCKN  D W  ++ L+            G SIQQFD DVTQEY
Subjt:  MAPQLRHANNHLLPRRAHGSR--------WRDQFCVTRSATHIIWEPYKNVIHNLSNFCKN--DWWDNVAHLVMRWQSRRRFIATGASIQQFDRDVTQEY

Query:  IHWYNNITRLYITRSGAALGHLM-----------------------------IHNKSLIYAIIMRVNRGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGY
        IHWYNNITRLYITR GAA+GHL                              IHN   +  +   V+RGRVRVEE ELDEVYHNVEEVPP TQTQSQTGY
Subjt:  IHWYNNITRLYITRSGAALGHLM-----------------------------IHNKSLIYAIIMRVNRGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGY

Query:  GSPMMMIPAFGAGYCDSE
        GSPM M+P FGAGY DSE
Subjt:  GSPMMMIPAFGAGYCDSE

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein4.5e-5452.67Show/hide
Query:  MAPQLRHANNHLLPRRAHGSRWRDQFCVTRSATH----------------IIWEPYKNVIHNLSNFCKN--DWWDNVAHLVM----RW------------
        +APQL H N+HLL  RA GSRWRDQFCV RSAT+                IIWEPYK+VI NL NFCKN  D W  ++ L+      W            
Subjt:  MAPQLRHANNHLLPRRAHGSRWRDQFCVTRSATH----------------IIWEPYKNVIHNLSNFCKN--DWWDNVAHLVM----RW------------

Query:  -QSRRRFIATGASIQQFDRDVTQEYIHWYNNITRLYITRSGAALGHL-----------------------------MIHNKSLIYAIIMRVNRGRVRVEE
         +SRRRF+    SIQQFD DVTQEYIH YNNITRLYITR GA +GHL                              IHN   +  +   V+R R RVEE
Subjt:  -QSRRRFIATGASIQQFDRDVTQEYIHWYNNITRLYITRSGAALGHL-----------------------------MIHNKSLIYAIIMRVNRGRVRVEE

Query:  PELDEVYHNVEEVPPVTQTQSQTGYGSPMMMIPAFGAGYCDSE
         ELDEVYHNVEEVPP TQTQSQTGYGSPM M+P FGAGYCDSE
Subjt:  PELDEVYHNVEEVPPVTQTQSQTGYGSPMMMIPAFGAGYCDSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCACAACTAAGACATGCAAACAATCATCTACTACCTAGACGAGCACACGGTTCACGATGGAGAGACCAATTTTGTGTAACAAGATCAGCTACTCATATTATTTG
GGAGCCTTATAAAAATGTAATTCATAATTTATCCAATTTCTGTAAGAATGATTGGTGGGACAATGTTGCACATTTAGTAATGCGATGGCAATCTCGTAGAAGATTTATTG
CCACTGGAGCTTCAATTCAGCAATTTGATCGGGATGTGACTCAAGAATACATCCACTGGTATAATAATATTACGAGGCTCTACATCACTCGATCGGGAGCAGCTTTGGGT
CATCTGATGATCCATAACAAGTCCTTGATATATGCAATAATAATGAGAGTTAACAGGGGACGTGTTCGAGTGGAAGAACCTGAACTCGATGAAGTTTACCATAATGTAGA
AGAAGTACCTCCAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGCCCGATGATGATGATACCAGCATTTGGAGCAGGATATTGTGATTCTGAGGATATTATGACTC
AGAGGTTGGTCCATCGTCTTCATACATGGATGTCGGACCATCAACTTCTTACATGCATGGACATGGACACGGACGTGGCCGCGGAGACATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCACAACTAAGACATGCAAACAATCATCTACTACCTAGACGAGCACACGGTTCACGATGGAGAGACCAATTTTGTGTAACAAGATCAGCTACTCATATTATTTG
GGAGCCTTATAAAAATGTAATTCATAATTTATCCAATTTCTGTAAGAATGATTGGTGGGACAATGTTGCACATTTAGTAATGCGATGGCAATCTCGTAGAAGATTTATTG
CCACTGGAGCTTCAATTCAGCAATTTGATCGGGATGTGACTCAAGAATACATCCACTGGTATAATAATATTACGAGGCTCTACATCACTCGATCGGGAGCAGCTTTGGGT
CATCTGATGATCCATAACAAGTCCTTGATATATGCAATAATAATGAGAGTTAACAGGGGACGTGTTCGAGTGGAAGAACCTGAACTCGATGAAGTTTACCATAATGTAGA
AGAAGTACCTCCAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGCCCGATGATGATGATACCAGCATTTGGAGCAGGATATTGTGATTCTGAGGATATTATGACTC
AGAGGTTGGTCCATCGTCTTCATACATGGATGTCGGACCATCAACTTCTTACATGCATGGACATGGACACGGACGTGGCCGCGGAGACATAA
Protein sequenceShow/hide protein sequence
MAPQLRHANNHLLPRRAHGSRWRDQFCVTRSATHIIWEPYKNVIHNLSNFCKNDWWDNVAHLVMRWQSRRRFIATGASIQQFDRDVTQEYIHWYNNITRLYITRSGAALG
HLMIHNKSLIYAIIMRVNRGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGYGSPMMMIPAFGAGYCDSEDIMTQRLVHRLHTWMSDHQLLTCMDMDTDVAAET