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PI0026594 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026594
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationchr12:14150765..14151028
RNA-Seq ExpressionPI0026594
SyntenyPI0026594
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026280.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]8.5e-0651.61Show/hide
Query:  KSSNQQVRIQVEKQMLSRVTQKLVSGLGPVRGSFEKIYGIELLKALGATTFTGTTIPTDVVE
        +SS   V   VE+Q+L R+ Q+L+ G+   +   EK YGIE LKALGATTF GTT P D  E
Subjt:  KSSNQQVRIQVEKQMLSRVTQKLVSGLGPVRGSFEKIYGIELLKALGATTFTGTTIPTDVVE

KAA0035225.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.1e-0552.54Show/hide
Query:  KSSNQQVRIQVEKQMLSRVTQKLVSGLGPVRGSFEKIYGIELLKALGATTFTGTTIPTD
        +SS   V   +E+Q+L R+ Q+L+SG+   +   EK YGIE LKALGATTF GTT P D
Subjt:  KSSNQQVRIQVEKQMLSRVTQKLVSGLGPVRGSFEKIYGIELLKALGATTFTGTTIPTD

KAA0036813.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]5.9e-0756.67Show/hide
Query:  KSSNQQVRIQVEKQMLSRVTQKLVSGLGPVRGSFEKIYGIELLKALGATTFTGTTIPTDV
        +SS  +V   VE+Q+L R+ Q+LVSG+   +   EK YG E LKALGATTF GTT PTDV
Subjt:  KSSNQQVRIQVEKQMLSRVTQKLVSGLGPVRGSFEKIYGIELLKALGATTFTGTTIPTDV

TYJ95881.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]5.9e-0756.67Show/hide
Query:  KSSNQQVRIQVEKQMLSRVTQKLVSGLGPVRGSFEKIYGIELLKALGATTFTGTTIPTDV
        +SS  +V   VE+Q+L R+ Q+LVSG+   +   EK YG E LKALGATTF GTT PTDV
Subjt:  KSSNQQVRIQVEKQMLSRVTQKLVSGLGPVRGSFEKIYGIELLKALGATTFTGTTIPTDV

WP_217833179.1 hypothetical protein, partial [Synechococcus sp. PCC 7002]5.5e-0547.46Show/hide
Query:  KSSNQQVRIQVEKQMLSRVTQKLVSGLGPVRGSFEKIYGIELLKALGATTFTGTTIPTD
        +SS+ Q  + VE+Q+ +R+ Q+L + +G V    EK Y IE LKALGATTF GT  P +
Subjt:  KSSNQQVRIQVEKQMLSRVTQKLVSGLGPVRGSFEKIYGIELLKALGATTFTGTTIPTD

TrEMBL top hitse value%identityAlignment
A0A5A7SJ99 DNA/RNA polymerases superfamily protein4.1e-0651.61Show/hide
Query:  KSSNQQVRIQVEKQMLSRVTQKLVSGLGPVRGSFEKIYGIELLKALGATTFTGTTIPTDVVE
        +SS   V   VE+Q+L R+ Q+L+ G+   +   EK YGIE LKALGATTF GTT P D  E
Subjt:  KSSNQQVRIQVEKQMLSRVTQKLVSGLGPVRGSFEKIYGIELLKALGATTFTGTTIPTDVVE

A0A5A7T1M0 Reverse transcriptase2.9e-0756.67Show/hide
Query:  KSSNQQVRIQVEKQMLSRVTQKLVSGLGPVRGSFEKIYGIELLKALGATTFTGTTIPTDV
        +SS  +V   VE+Q+L R+ Q+LVSG+   +   EK YG E LKALGATTF GTT PTDV
Subjt:  KSSNQQVRIQVEKQMLSRVTQKLVSGLGPVRGSFEKIYGIELLKALGATTFTGTTIPTDV

A0A5A7U067 Retrotrans_gag domain-containing protein1.0e-0452.73Show/hide
Query:  KSSNQQVRIQVEKQMLSRVTQKLVSGLGPVRGSFEKIYGIELLKALGATTFTGTT
        +SS   V + VE+Q+L R+ Q LVSG+   + + EK + IE LKALGATTF GTT
Subjt:  KSSNQQVRIQVEKQMLSRVTQKLVSGLGPVRGSFEKIYGIELLKALGATTFTGTT

A0A5D3BB91 Reverse transcriptase2.9e-0756.67Show/hide
Query:  KSSNQQVRIQVEKQMLSRVTQKLVSGLGPVRGSFEKIYGIELLKALGATTFTGTTIPTDV
        +SS  +V   VE+Q+L R+ Q+LVSG+   +   EK YG E LKALGATTF GTT PTDV
Subjt:  KSSNQQVRIQVEKQMLSRVTQKLVSGLGPVRGSFEKIYGIELLKALGATTFTGTTIPTDV

A0A5D3DES5 DNA/RNA polymerases superfamily protein5.4e-0652.54Show/hide
Query:  KSSNQQVRIQVEKQMLSRVTQKLVSGLGPVRGSFEKIYGIELLKALGATTFTGTTIPTD
        +SS   V   +E+Q+L R+ Q+L+SG+   +   EK YGIE LKALGATTF GTT P D
Subjt:  KSSNQQVRIQVEKQMLSRVTQKLVSGLGPVRGSFEKIYGIELLKALGATTFTGTTIPTD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTATTAGCACCCCTATTGCAGAAGGCATTGAGTTTGGTCAAATCAAGCAATCAGCAAGTGAGAATACAAGTTGAAAAACAAATGTTGAGTAGAGTTACTCAGAAATT
AGTATCGGGTTTAGGACCAGTGCGAGGAAGTTTTGAGAAAATCTATGGAATAGAGTTGTTGAAAGCTCTAGGAGCCACAACTTTCACAGGAACGACAATTCCTACAGATG
TGGTTGAATCAAGCAATCATCAAGTGAGAAATTCTTTGGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTATTAGCACCCCTATTGCAGAAGGCATTGAGTTTGGTCAAATCAAGCAATCAGCAAGTGAGAATACAAGTTGAAAAACAAATGTTGAGTAGAGTTACTCAGAAATT
AGTATCGGGTTTAGGACCAGTGCGAGGAAGTTTTGAGAAAATCTATGGAATAGAGTTGTTGAAAGCTCTAGGAGCCACAACTTTCACAGGAACGACAATTCCTACAGATG
TGGTTGAATCAAGCAATCATCAAGTGAGAAATTCTTTGGGGTGA
Protein sequenceShow/hide protein sequence
MLLAPLLQKALSLVKSSNQQVRIQVEKQMLSRVTQKLVSGLGPVRGSFEKIYGIELLKALGATTFTGTTIPTDVVESSNHQVRNSLG