; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0026598 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026598
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr01:14536444..14537250
RNA-Seq ExpressionPI0026598
SyntenyPI0026598
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily
IPR032567 - LDOC1-related
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037220.1 reverse transcriptase [Cucumis melo var. makuwa]1.2e-11177.53Show/hide
Query:  MKVVNSTALPIVGVVKRTMIRLEGWNGHTDFVVIKMDDFDVVLGMEFLLEHQVISMPLAKCLMIIGSTPTVVQIDIRQPNGLKMILAMQLKKGLTREEPT
        MK VNS ALPI+G+VKRTMIRL GW+G  DFVV+KMDDFDVVLGMEFLLEHQVI MPLAKCL+I G TP+VVQ D+RQP+GLKMI AMQLKKGL+R+EPT
Subjt:  MKVVNSTALPIVGVVKRTMIRLEGWNGHTDFVVIKMDDFDVVLGMEFLLEHQVISMPLAKCLMIIGSTPTVVQIDIRQPNGLKMILAMQLKKGLTREEPT

Query:  FM-----------EIVPKDILCVLEKYSNVMPDSLPKALQPRRIIDHEIELIPGAKSPAKNAYRMAPPELEELRKQLDELLSAGFIRPAKAPYGAPVLFQ
        FM           E VPK+I+ VLEKY +VMPDSLPK+L PRR+IDHEIEL+PGAK PAKNAYRMAPPEL ELRKQLDELL+AGFIRPAKAPYGAPVLFQ
Subjt:  FM-----------EIVPKDILCVLEKYSNVMPDSLPKALQPRRIIDHEIELIPGAKSPAKNAYRMAPPELEELRKQLDELLSAGFIRPAKAPYGAPVLFQ

Query:  KKKDGSLHLCIDYRTLNKVIVCNKYSLPIITDLFDRLHGAKYFSKLDLQSRYYQVRIVEGQAKDNMC
        +KKDGSL LCIDYR LNK+ V NKY LPIITDLFDRLHGAKYFSKLDL+S YYQVRI EG      C
Subjt:  KKKDGSLHLCIDYRTLNKVIVCNKYSLPIITDLFDRLHGAKYFSKLDLQSRYYQVRIVEGQAKDNMC

KAA0063412.1 reverse transcriptase [Cucumis melo var. makuwa]1.2e-11177.53Show/hide
Query:  MKVVNSTALPIVGVVKRTMIRLEGWNGHTDFVVIKMDDFDVVLGMEFLLEHQVISMPLAKCLMIIGSTPTVVQIDIRQPNGLKMILAMQLKKGLTREEPT
        MK VNS ALPI+G+VKRTMIRL GW+G  DFVV+KMDDFDVVLGMEFLLEHQVI MPLAKCL+I G TP+VVQ D+RQP+GLKMI AMQLKKGL+R+EPT
Subjt:  MKVVNSTALPIVGVVKRTMIRLEGWNGHTDFVVIKMDDFDVVLGMEFLLEHQVISMPLAKCLMIIGSTPTVVQIDIRQPNGLKMILAMQLKKGLTREEPT

Query:  FM-----------EIVPKDILCVLEKYSNVMPDSLPKALQPRRIIDHEIELIPGAKSPAKNAYRMAPPELEELRKQLDELLSAGFIRPAKAPYGAPVLFQ
        FM           E VPK+I+ VLEKY +VMPDSLPK+L PRR+IDHEIEL+PGAK PAKNAYRMAPPEL ELRKQLDELL+AGFIRPAKAPYGAPVLFQ
Subjt:  FM-----------EIVPKDILCVLEKYSNVMPDSLPKALQPRRIIDHEIELIPGAKSPAKNAYRMAPPELEELRKQLDELLSAGFIRPAKAPYGAPVLFQ

Query:  KKKDGSLHLCIDYRTLNKVIVCNKYSLPIITDLFDRLHGAKYFSKLDLQSRYYQVRIVEGQAKDNMC
        +KKDGSL LCIDYR LNK+ V NKY LPIITDLFDRLHGAKYFSKLDL+S YYQVRI EG      C
Subjt:  KKKDGSLHLCIDYRTLNKVIVCNKYSLPIITDLFDRLHGAKYFSKLDLQSRYYQVRIVEGQAKDNMC

KAA0066677.1 uncharacterized protein E6C27_scaffold271G00020 [Cucumis melo var. makuwa]2.4e-11277.9Show/hide
Query:  MKVVNSTALPIVGVVKRTMIRLEGWNGHTDFVVIKMDDFDVVLGMEFLLEHQVISMPLAKCLMIIGSTPTVVQIDIRQPNGLKMILAMQLKKGLTREEPT
        MK VNS ALPI+G+VKRTMIRLEGW+G  DFVV+KMDDFDVVLGMEFLLEHQVI MPLAKCL+I G TP+VVQ D+RQP+GLKMI AMQLKKGL+R+EPT
Subjt:  MKVVNSTALPIVGVVKRTMIRLEGWNGHTDFVVIKMDDFDVVLGMEFLLEHQVISMPLAKCLMIIGSTPTVVQIDIRQPNGLKMILAMQLKKGLTREEPT

Query:  FM-----------EIVPKDILCVLEKYSNVMPDSLPKALQPRRIIDHEIELIPGAKSPAKNAYRMAPPELEELRKQLDELLSAGFIRPAKAPYGAPVLFQ
        FM           E VPK+I+ VLEKY +VMPDSLPK+L PRR+IDHEIEL+PGAK PAKNAYRMAPPEL ELRKQLDELL+ GFIRPAKAPYGAPVLFQ
Subjt:  FM-----------EIVPKDILCVLEKYSNVMPDSLPKALQPRRIIDHEIELIPGAKSPAKNAYRMAPPELEELRKQLDELLSAGFIRPAKAPYGAPVLFQ

Query:  KKKDGSLHLCIDYRTLNKVIVCNKYSLPIITDLFDRLHGAKYFSKLDLQSRYYQVRIVEGQAKDNMC
        KKKDGSL LCIDYR LNK+ V NKY LPIITDLFDRLHGAKYFSKLDL+S YYQVRI EG      C
Subjt:  KKKDGSLHLCIDYRTLNKVIVCNKYSLPIITDLFDRLHGAKYFSKLDLQSRYYQVRIVEGQAKDNMC

KAA0067557.1 reverse transcriptase [Cucumis melo var. makuwa]1.2e-11177.53Show/hide
Query:  MKVVNSTALPIVGVVKRTMIRLEGWNGHTDFVVIKMDDFDVVLGMEFLLEHQVISMPLAKCLMIIGSTPTVVQIDIRQPNGLKMILAMQLKKGLTREEPT
        MK VNS ALPI+G+VKRTMIRL GW+G  DFVV+KMDDFDVVLGMEFLLEHQVI MPLAKCL+I G TP+VVQ D+RQP+GLKMI AMQLKKGL+R+EPT
Subjt:  MKVVNSTALPIVGVVKRTMIRLEGWNGHTDFVVIKMDDFDVVLGMEFLLEHQVISMPLAKCLMIIGSTPTVVQIDIRQPNGLKMILAMQLKKGLTREEPT

Query:  FM-----------EIVPKDILCVLEKYSNVMPDSLPKALQPRRIIDHEIELIPGAKSPAKNAYRMAPPELEELRKQLDELLSAGFIRPAKAPYGAPVLFQ
        FM           E VPK+I+ VLEKY +VMPDSLPK+L PRR+IDHEIEL+PGAK PAKNAYRMAPPEL ELRKQLDELL+AGFIRPAKAPYGAPVLFQ
Subjt:  FM-----------EIVPKDILCVLEKYSNVMPDSLPKALQPRRIIDHEIELIPGAKSPAKNAYRMAPPELEELRKQLDELLSAGFIRPAKAPYGAPVLFQ

Query:  KKKDGSLHLCIDYRTLNKVIVCNKYSLPIITDLFDRLHGAKYFSKLDLQSRYYQVRIVEGQAKDNMC
        +KKDGSL LCIDYR LNK+ V NKY LPIITDLFDRLHGAKYFSKLDL+S YYQVRI EG      C
Subjt:  KKKDGSLHLCIDYRTLNKVIVCNKYSLPIITDLFDRLHGAKYFSKLDLQSRYYQVRIVEGQAKDNMC

TYK07954.1 reverse transcriptase [Cucumis melo var. makuwa]6.9e-11277.9Show/hide
Query:  MKVVNSTALPIVGVVKRTMIRLEGWNGHTDFVVIKMDDFDVVLGMEFLLEHQVISMPLAKCLMIIGSTPTVVQIDIRQPNGLKMILAMQLKKGLTREEPT
        MK VNS ALPI+G+VKRTMIRL GW+G  DFVV+KMDDFDVVLGMEFLLEHQVI MPLAKCL+I G TP+VVQ D+RQP+GLKMI AMQLKKGL+R+EPT
Subjt:  MKVVNSTALPIVGVVKRTMIRLEGWNGHTDFVVIKMDDFDVVLGMEFLLEHQVISMPLAKCLMIIGSTPTVVQIDIRQPNGLKMILAMQLKKGLTREEPT

Query:  FM-----------EIVPKDILCVLEKYSNVMPDSLPKALQPRRIIDHEIELIPGAKSPAKNAYRMAPPELEELRKQLDELLSAGFIRPAKAPYGAPVLFQ
        FM           E VPK+I+ VLEKY +VMPDSLPK+L PRR+IDHEIEL+PGAK PAKNAYRMAPPEL ELRKQLDELL+AGFIRPAKAPYGAPVLFQ
Subjt:  FM-----------EIVPKDILCVLEKYSNVMPDSLPKALQPRRIIDHEIELIPGAKSPAKNAYRMAPPELEELRKQLDELLSAGFIRPAKAPYGAPVLFQ

Query:  KKKDGSLHLCIDYRTLNKVIVCNKYSLPIITDLFDRLHGAKYFSKLDLQSRYYQVRIVEGQAKDNMC
        KKKDGSL LCIDYR LNK+ V NKY LPIITDLFDRLHGAKYFSKLDL+S YYQVRI EG      C
Subjt:  KKKDGSLHLCIDYRTLNKVIVCNKYSLPIITDLFDRLHGAKYFSKLDLQSRYYQVRIVEGQAKDNMC

TrEMBL top hitse value%identityAlignment
A0A5A7T0E2 Reverse transcriptase5.7e-11277.53Show/hide
Query:  MKVVNSTALPIVGVVKRTMIRLEGWNGHTDFVVIKMDDFDVVLGMEFLLEHQVISMPLAKCLMIIGSTPTVVQIDIRQPNGLKMILAMQLKKGLTREEPT
        MK VNS ALPI+G+VKRTMIRL GW+G  DFVV+KMDDFDVVLGMEFLLEHQVI MPLAKCL+I G TP+VVQ D+RQP+GLKMI AMQLKKGL+R+EPT
Subjt:  MKVVNSTALPIVGVVKRTMIRLEGWNGHTDFVVIKMDDFDVVLGMEFLLEHQVISMPLAKCLMIIGSTPTVVQIDIRQPNGLKMILAMQLKKGLTREEPT

Query:  FM-----------EIVPKDILCVLEKYSNVMPDSLPKALQPRRIIDHEIELIPGAKSPAKNAYRMAPPELEELRKQLDELLSAGFIRPAKAPYGAPVLFQ
        FM           E VPK+I+ VLEKY +VMPDSLPK+L PRR+IDHEIEL+PGAK PAKNAYRMAPPEL ELRKQLDELL+AGFIRPAKAPYGAPVLFQ
Subjt:  FM-----------EIVPKDILCVLEKYSNVMPDSLPKALQPRRIIDHEIELIPGAKSPAKNAYRMAPPELEELRKQLDELLSAGFIRPAKAPYGAPVLFQ

Query:  KKKDGSLHLCIDYRTLNKVIVCNKYSLPIITDLFDRLHGAKYFSKLDLQSRYYQVRIVEGQAKDNMC
        +KKDGSL LCIDYR LNK+ V NKY LPIITDLFDRLHGAKYFSKLDL+S YYQVRI EG      C
Subjt:  KKKDGSLHLCIDYRTLNKVIVCNKYSLPIITDLFDRLHGAKYFSKLDLQSRYYQVRIVEGQAKDNMC

A0A5A7VHT2 Reverse transcriptase domain-containing protein1.1e-11277.9Show/hide
Query:  MKVVNSTALPIVGVVKRTMIRLEGWNGHTDFVVIKMDDFDVVLGMEFLLEHQVISMPLAKCLMIIGSTPTVVQIDIRQPNGLKMILAMQLKKGLTREEPT
        MK VNS ALPI+G+VKRTMIRLEGW+G  DFVV+KMDDFDVVLGMEFLLEHQVI MPLAKCL+I G TP+VVQ D+RQP+GLKMI AMQLKKGL+R+EPT
Subjt:  MKVVNSTALPIVGVVKRTMIRLEGWNGHTDFVVIKMDDFDVVLGMEFLLEHQVISMPLAKCLMIIGSTPTVVQIDIRQPNGLKMILAMQLKKGLTREEPT

Query:  FM-----------EIVPKDILCVLEKYSNVMPDSLPKALQPRRIIDHEIELIPGAKSPAKNAYRMAPPELEELRKQLDELLSAGFIRPAKAPYGAPVLFQ
        FM           E VPK+I+ VLEKY +VMPDSLPK+L PRR+IDHEIEL+PGAK PAKNAYRMAPPEL ELRKQLDELL+ GFIRPAKAPYGAPVLFQ
Subjt:  FM-----------EIVPKDILCVLEKYSNVMPDSLPKALQPRRIIDHEIELIPGAKSPAKNAYRMAPPELEELRKQLDELLSAGFIRPAKAPYGAPVLFQ

Query:  KKKDGSLHLCIDYRTLNKVIVCNKYSLPIITDLFDRLHGAKYFSKLDLQSRYYQVRIVEGQAKDNMC
        KKKDGSL LCIDYR LNK+ V NKY LPIITDLFDRLHGAKYFSKLDL+S YYQVRI EG      C
Subjt:  KKKDGSLHLCIDYRTLNKVIVCNKYSLPIITDLFDRLHGAKYFSKLDLQSRYYQVRIVEGQAKDNMC

A0A5D3BRZ6 Reverse transcriptase5.7e-11277.53Show/hide
Query:  MKVVNSTALPIVGVVKRTMIRLEGWNGHTDFVVIKMDDFDVVLGMEFLLEHQVISMPLAKCLMIIGSTPTVVQIDIRQPNGLKMILAMQLKKGLTREEPT
        MK VNS ALPI+G+VKRTMIRL GW+G  DFVV+KMDDFDVVLGMEFLLEHQVI MPLAKCL+I G TP+VVQ D+RQP+GLKMI AMQLKKGL+R+EPT
Subjt:  MKVVNSTALPIVGVVKRTMIRLEGWNGHTDFVVIKMDDFDVVLGMEFLLEHQVISMPLAKCLMIIGSTPTVVQIDIRQPNGLKMILAMQLKKGLTREEPT

Query:  FM-----------EIVPKDILCVLEKYSNVMPDSLPKALQPRRIIDHEIELIPGAKSPAKNAYRMAPPELEELRKQLDELLSAGFIRPAKAPYGAPVLFQ
        FM           E VPK+I+ VLEKY +VMPDSLPK+L PRR+IDHEIEL+PGAK PAKNAYRMAPPEL ELRKQLDELL+AGFIRPAKAPYGAPVLFQ
Subjt:  FM-----------EIVPKDILCVLEKYSNVMPDSLPKALQPRRIIDHEIELIPGAKSPAKNAYRMAPPELEELRKQLDELLSAGFIRPAKAPYGAPVLFQ

Query:  KKKDGSLHLCIDYRTLNKVIVCNKYSLPIITDLFDRLHGAKYFSKLDLQSRYYQVRIVEGQAKDNMC
        +KKDGSL LCIDYR LNK+ V NKY LPIITDLFDRLHGAKYFSKLDL+S YYQVRI EG      C
Subjt:  KKKDGSLHLCIDYRTLNKVIVCNKYSLPIITDLFDRLHGAKYFSKLDLQSRYYQVRIVEGQAKDNMC

A0A5D3C4R1 Reverse transcriptase5.7e-11277.53Show/hide
Query:  MKVVNSTALPIVGVVKRTMIRLEGWNGHTDFVVIKMDDFDVVLGMEFLLEHQVISMPLAKCLMIIGSTPTVVQIDIRQPNGLKMILAMQLKKGLTREEPT
        MK VNS ALPI+G+VKRTMIRL GW+G  DFVV+KMDDFDVVLGMEFLLEHQVI MPLAKCL+I G TP+VVQ D+RQP+GLKMI AMQLKKGL+R+EPT
Subjt:  MKVVNSTALPIVGVVKRTMIRLEGWNGHTDFVVIKMDDFDVVLGMEFLLEHQVISMPLAKCLMIIGSTPTVVQIDIRQPNGLKMILAMQLKKGLTREEPT

Query:  FM-----------EIVPKDILCVLEKYSNVMPDSLPKALQPRRIIDHEIELIPGAKSPAKNAYRMAPPELEELRKQLDELLSAGFIRPAKAPYGAPVLFQ
        FM           E VPK+I+ VLEKY +VMPDSLPK+L PRR+IDHEIEL+PGAK PAKNAYRMAPPEL ELRKQLDELL+AGFIRPAKAPYGAPVLFQ
Subjt:  FM-----------EIVPKDILCVLEKYSNVMPDSLPKALQPRRIIDHEIELIPGAKSPAKNAYRMAPPELEELRKQLDELLSAGFIRPAKAPYGAPVLFQ

Query:  KKKDGSLHLCIDYRTLNKVIVCNKYSLPIITDLFDRLHGAKYFSKLDLQSRYYQVRIVEGQAKDNMC
        +KKDGSL LCIDYR LNK+ V NKY LPIITDLFDRLHGAKYFSKLDL+S YYQVRI EG      C
Subjt:  KKKDGSLHLCIDYRTLNKVIVCNKYSLPIITDLFDRLHGAKYFSKLDLQSRYYQVRIVEGQAKDNMC

A0A5D3C9P8 Reverse transcriptase3.3e-11277.9Show/hide
Query:  MKVVNSTALPIVGVVKRTMIRLEGWNGHTDFVVIKMDDFDVVLGMEFLLEHQVISMPLAKCLMIIGSTPTVVQIDIRQPNGLKMILAMQLKKGLTREEPT
        MK VNS ALPI+G+VKRTMIRL GW+G  DFVV+KMDDFDVVLGMEFLLEHQVI MPLAKCL+I G TP+VVQ D+RQP+GLKMI AMQLKKGL+R+EPT
Subjt:  MKVVNSTALPIVGVVKRTMIRLEGWNGHTDFVVIKMDDFDVVLGMEFLLEHQVISMPLAKCLMIIGSTPTVVQIDIRQPNGLKMILAMQLKKGLTREEPT

Query:  FM-----------EIVPKDILCVLEKYSNVMPDSLPKALQPRRIIDHEIELIPGAKSPAKNAYRMAPPELEELRKQLDELLSAGFIRPAKAPYGAPVLFQ
        FM           E VPK+I+ VLEKY +VMPDSLPK+L PRR+IDHEIEL+PGAK PAKNAYRMAPPEL ELRKQLDELL+AGFIRPAKAPYGAPVLFQ
Subjt:  FM-----------EIVPKDILCVLEKYSNVMPDSLPKALQPRRIIDHEIELIPGAKSPAKNAYRMAPPELEELRKQLDELLSAGFIRPAKAPYGAPVLFQ

Query:  KKKDGSLHLCIDYRTLNKVIVCNKYSLPIITDLFDRLHGAKYFSKLDLQSRYYQVRIVEGQAKDNMC
        KKKDGSL LCIDYR LNK+ V NKY LPIITDLFDRLHGAKYFSKLDL+S YYQVRI EG      C
Subjt:  KKKDGSLHLCIDYRTLNKVIVCNKYSLPIITDLFDRLHGAKYFSKLDLQSRYYQVRIVEGQAKDNMC

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein5.1e-1734.88Show/hide
Query:  DSLPKALQPRRIIDHEIELI-PGAKSPAKNAYRMAPPELEELRKQLDELLSAGFIRPAKAPYGAPVLFQKKKDGSLHLCIDYRTLNKVIVCNKYSLPIIT
        + LPK   P + ++ E+EL     + P +N Y + P +++ +  ++++ L +G IR +KA    PV+F  KK+G+L + +DY+ LNK +  N Y LP+I 
Subjt:  DSLPKALQPRRIIDHEIELI-PGAKSPAKNAYRMAPPELEELRKQLDELLSAGFIRPAKAPYGAPVLFQKKKDGSLHLCIDYRTLNKVIVCNKYSLPIIT

Query:  DLFDRLHGAKYFSKLDLQSRYYQVRIVEG
         L  ++ G+  F+KLDL+S Y+ +R+ +G
Subjt:  DLFDRLHGAKYFSKLDLQSRYYQVRIVEG

P0CT41 Transposon Tf2-12 polyprotein5.1e-1734.88Show/hide
Query:  DSLPKALQPRRIIDHEIELI-PGAKSPAKNAYRMAPPELEELRKQLDELLSAGFIRPAKAPYGAPVLFQKKKDGSLHLCIDYRTLNKVIVCNKYSLPIIT
        + LPK   P + ++ E+EL     + P +N Y + P +++ +  ++++ L +G IR +KA    PV+F  KK+G+L + +DY+ LNK +  N Y LP+I 
Subjt:  DSLPKALQPRRIIDHEIELI-PGAKSPAKNAYRMAPPELEELRKQLDELLSAGFIRPAKAPYGAPVLFQKKKDGSLHLCIDYRTLNKVIVCNKYSLPIIT

Query:  DLFDRLHGAKYFSKLDLQSRYYQVRIVEG
         L  ++ G+  F+KLDL+S Y+ +R+ +G
Subjt:  DLFDRLHGAKYFSKLDLQSRYYQVRIVEG

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein3.1e-2236.54Show/hide
Query:  EPTFMEIVPKDILCVL-----EKYSNVMPDSLPKALQPRRI----IDHEIELIPGAKSPAKNAYRMAPPELEELRKQLDELLSAGFIRPAKAPYGAPVLF
        EP   +   KD  C L     +KY  ++ + LP   +P  I    + H+IE+ PGA+ P    Y +     +E+ K + +LL   FI P+K+P  +PV+ 
Subjt:  EPTFMEIVPKDILCVL-----EKYSNVMPDSLPKALQPRRI----IDHEIELIPGAKSPAKNAYRMAPPELEELRKQLDELLSAGFIRPAKAPYGAPVLF

Query:  QKKKDGSLHLCIDYRTLNKVIVCNKYSLPIITDLFDRLHGAKYFSKLDLQSRYYQV
          KKDG+  LC+DYRTLNK  + + + LP I +L  R+  A+ F+ LDL S Y+Q+
Subjt:  QKKKDGSLHLCIDYRTLNKVIVCNKYSLPIITDLFDRLHGAKYFSKLDLQSRYYQV

Q99315 Transposon Ty3-G Gag-Pol polyprotein3.1e-2236.54Show/hide
Query:  EPTFMEIVPKDILCVL-----EKYSNVMPDSLPKALQPRRI----IDHEIELIPGAKSPAKNAYRMAPPELEELRKQLDELLSAGFIRPAKAPYGAPVLF
        EP   +   KD  C L     +KY  ++ + LP   +P  I    + H+IE+ PGA+ P    Y +     +E+ K + +LL   FI P+K+P  +PV+ 
Subjt:  EPTFMEIVPKDILCVL-----EKYSNVMPDSLPKALQPRRI----IDHEIELIPGAKSPAKNAYRMAPPELEELRKQLDELLSAGFIRPAKAPYGAPVLF

Query:  QKKKDGSLHLCIDYRTLNKVIVCNKYSLPIITDLFDRLHGAKYFSKLDLQSRYYQV
          KKDG+  LC+DYRTLNK  + + + LP I +L  R+  A+ F+ LDL S Y+Q+
Subjt:  QKKKDGSLHLCIDYRTLNKVIVCNKYSLPIITDLFDRLHGAKYFSKLDLQSRYYQV

Q9UR07 Transposon Tf2-11 polyprotein5.1e-1734.88Show/hide
Query:  DSLPKALQPRRIIDHEIELI-PGAKSPAKNAYRMAPPELEELRKQLDELLSAGFIRPAKAPYGAPVLFQKKKDGSLHLCIDYRTLNKVIVCNKYSLPIIT
        + LPK   P + ++ E+EL     + P +N Y + P +++ +  ++++ L +G IR +KA    PV+F  KK+G+L + +DY+ LNK +  N Y LP+I 
Subjt:  DSLPKALQPRRIIDHEIELI-PGAKSPAKNAYRMAPPELEELRKQLDELLSAGFIRPAKAPYGAPVLFQKKKDGSLHLCIDYRTLNKVIVCNKYSLPIIT

Query:  DLFDRLHGAKYFSKLDLQSRYYQVRIVEG
         L  ++ G+  F+KLDL+S Y+ +R+ +G
Subjt:  DLFDRLHGAKYFSKLDLQSRYYQVRIVEG

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGTCGTAAACTCTACTGCCCTACCTATCGTCGGAGTTGTAAAAAGAACGATGATAAGGTTGGAAGGATGGAATGGCCATACGGACTTCGTGGTCATCAAGATGGA
CGACTTTGATGTGGTATTGGGAATGGAATTTTTGCTAGAACATCAAGTGATATCGATGCCTCTAGCCAAATGTTTAATGATTATTGGATCCACTCCCACCGTTGTGCAGA
TAGACATTCGTCAACCCAATGGGTTAAAAATGATTTTGGCCATGCAACTGAAGAAGGGCCTCACTCGCGAAGAACCAACATTCATGGAGATAGTCCCTAAAGACATTCTG
TGTGTCTTAGAGAAGTATAGCAATGTGATGCCCGATAGTTTGCCCAAAGCTCTACAGCCAAGAAGAATAATTGATCATGAGATCGAGCTTATACCAGGGGCAAAATCGCC
TGCAAAGAATGCTTATCGTATGGCACCACCAGAGTTGGAGGAACTTCGTAAACAGTTAGATGAGTTGTTGAGTGCAGGATTCATTAGGCCTGCGAAAGCTCCATATGGGG
CCCCAGTCCTTTTCCAAAAGAAGAAGGATGGAAGCTTACATCTATGTATCGACTACCGTACATTAAATAAGGTCATAGTTTGCAACAAATACTCGCTCCCCATAATCACG
GATCTATTTGACCGCCTACACGGAGCAAAGTATTTCTCAAAATTGGATCTGCAATCAAGATACTACCAAGTAAGGATTGTCGAAGGGCAAGCCAAAGACAACATGTGTCA
CTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGGTCGTAAACTCTACTGCCCTACCTATCGTCGGAGTTGTAAAAAGAACGATGATAAGGTTGGAAGGATGGAATGGCCATACGGACTTCGTGGTCATCAAGATGGA
CGACTTTGATGTGGTATTGGGAATGGAATTTTTGCTAGAACATCAAGTGATATCGATGCCTCTAGCCAAATGTTTAATGATTATTGGATCCACTCCCACCGTTGTGCAGA
TAGACATTCGTCAACCCAATGGGTTAAAAATGATTTTGGCCATGCAACTGAAGAAGGGCCTCACTCGCGAAGAACCAACATTCATGGAGATAGTCCCTAAAGACATTCTG
TGTGTCTTAGAGAAGTATAGCAATGTGATGCCCGATAGTTTGCCCAAAGCTCTACAGCCAAGAAGAATAATTGATCATGAGATCGAGCTTATACCAGGGGCAAAATCGCC
TGCAAAGAATGCTTATCGTATGGCACCACCAGAGTTGGAGGAACTTCGTAAACAGTTAGATGAGTTGTTGAGTGCAGGATTCATTAGGCCTGCGAAAGCTCCATATGGGG
CCCCAGTCCTTTTCCAAAAGAAGAAGGATGGAAGCTTACATCTATGTATCGACTACCGTACATTAAATAAGGTCATAGTTTGCAACAAATACTCGCTCCCCATAATCACG
GATCTATTTGACCGCCTACACGGAGCAAAGTATTTCTCAAAATTGGATCTGCAATCAAGATACTACCAAGTAAGGATTGTCGAAGGGCAAGCCAAAGACAACATGTGTCA
CTAG
Protein sequenceShow/hide protein sequence
MKVVNSTALPIVGVVKRTMIRLEGWNGHTDFVVIKMDDFDVVLGMEFLLEHQVISMPLAKCLMIIGSTPTVVQIDIRQPNGLKMILAMQLKKGLTREEPTFMEIVPKDIL
CVLEKYSNVMPDSLPKALQPRRIIDHEIELIPGAKSPAKNAYRMAPPELEELRKQLDELLSAGFIRPAKAPYGAPVLFQKKKDGSLHLCIDYRTLNKVIVCNKYSLPIIT
DLFDRLHGAKYFSKLDLQSRYYQVRIVEGQAKDNMCH