; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0026600 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026600
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol polyprotein
Genome locationchr09:17864758..17865651
RNA-Seq ExpressionPI0026600
SyntenyPI0026600
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036856.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.7e-3539.58Show/hide
Query:  SSPVPSPPVNVPTVTSSSSSQDNIPLSRLLNHLSSNAVPAPSNSDHHQSSASTPTLDDNFTDPPPDSVSDPA---PQSTPTKVKSKTKR-------VSTQ
        SSP+ SP   +P + +   S   +P +  +    ++A    +  D+          D N   P  D+V   A   P S PT++K   K+       ++T+
Subjt:  SSPVPSPPVNVPTVTSSSSSQDNIPLSRLLNHLSSNAVPAPSNSDHHQSSASTPTLDDNFTDPPPDSVSDPA---PQSTPTKVKSKTKR-------VSTQ

Query:  SGRRQVPLHVNPVPIDGIFFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNLGPYYPKLIREMFVNIPTSFDNPSSPDYHTIH
        +GR+++PL++  VPIDGI FH E ++H+WK+V+QRRIA E ++SD HHSC+++M LI +A+L  T+S++ P+YP+LIRE  VN+PT+ ++PSSPDY T+H
Subjt:  SGRRQVPLHVNPVPIDGIFFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNLGPYYPKLIREMFVNIPTSFDNPSSPDYHTIH

Query:  IRGLPFSFSPHSLNTFLG-ITLPSDSPSLPTSDDLASEIT
        IRG  F+ SP  +N F+G +   + SPS  ++D LASE++
Subjt:  IRGLPFSFSPHSLNTFLG-ITLPSDSPSLPTSDDLASEIT

KAA0066659.1 uncharacterized protein E6C27_scaffold979G00910 [Cucumis melo var. makuwa]4.2e-3651.9Show/hide
Query:  PQSTPTKVKSKTKRVSTQSGRRQVPLHVNPVPIDGIFFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNLGPYYPKLIREMFV
        P+S   K +   + ++T+ GR+++PL++  VPIDGI FH E  V +WKYV+QRR+A E +V D HHS L+VM LI ++    T+SN+G +YPKLI+E+ V
Subjt:  PQSTPTKVKSKTKRVSTQSGRRQVPLHVNPVPIDGIFFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNLGPYYPKLIREMFV

Query:  NIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGITLPSDS-PSLPTSDDLASEIT
        N+P+ FDNPSSP+Y+TIHIRGL F  SP  +N FLG T+ S S PS P++D LAS ++
Subjt:  NIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGITLPSDS-PSLPTSDDLASEIT

TYJ96199.1 uncharacterized protein E5676_scaffold261G00310 [Cucumis melo var. makuwa]3.9e-3445.65Show/hide
Query:  DDNFTDPPPDSVSDPAPQST---PTKVKSKTKR-------VSTQSGRRQVPLHVNPVPIDGIFFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTL
        D N   P  D++   A Q T   PT+ KS  K+       ++T++GR+++PL++  VPI GI FHHE +V +WK+V+QRRIA E ++S+ HHSC++++ L
Subjt:  DDNFTDPPPDSVSDPAPQST---PTKVKSKTKR-------VSTQSGRRQVPLHVNPVPIDGIFFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTL

Query:  ISQAKLLTTVSNLGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGITLPSD-SPSLPTSDDLASEIT
        I +A L  T+SN+G  YPKLIR+  VN+   F++PSSPDY T+HIRG  F+ SP  +N FLG  +  + SPS P++D LAS ++
Subjt:  ISQAKLLTTVSNLGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGITLPSD-SPSLPTSDDLASEIT

XP_008454699.1 PREDICTED: uncharacterized protein LOC103495053 [Cucumis melo]2.7e-3539.58Show/hide
Query:  SSPVPSPPVNVPTVTSSSSSQDNIPLSRLLNHLSSNAVPAPSNSDHHQSSASTPTLDDNFTDPPPDSVSDPA---PQSTPTKVKSKTKR-------VSTQ
        SSP+ SP   +P + +   S   +P +  +    ++A    +  D+          D N   P  D+V   A   P S PT++K   K+       ++T+
Subjt:  SSPVPSPPVNVPTVTSSSSSQDNIPLSRLLNHLSSNAVPAPSNSDHHQSSASTPTLDDNFTDPPPDSVSDPA---PQSTPTKVKSKTKR-------VSTQ

Query:  SGRRQVPLHVNPVPIDGIFFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNLGPYYPKLIREMFVNIPTSFDNPSSPDYHTIH
        +GR+++PL++  VPIDGI FH E ++H+WK+V+QRRIA E ++SD HHSC+++M LI +A+L  T+S++ P+YP+LIRE  VN+PT+ ++PSSPDY T+H
Subjt:  SGRRQVPLHVNPVPIDGIFFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNLGPYYPKLIREMFVNIPTSFDNPSSPDYHTIH

Query:  IRGLPFSFSPHSLNTFLG-ITLPSDSPSLPTSDDLASEIT
        IRG  F+ SP  +N F+G +   + SPS  ++D LASE++
Subjt:  IRGLPFSFSPHSLNTFLG-ITLPSDSPSLPTSDDLASEIT

XP_008454855.1 PREDICTED: uncharacterized protein LOC103495162 [Cucumis melo]6.0e-3536.87Show/hide
Query:  MVSTRRGYYSSQVPVPKKSVNPHVGPAVKNVRTNKHGVRLRGLSKVSSPPVSSAPLVSSSSSTTNTSTS----------SPVPSPPVNVPTVTSS-----
        MV+TR+G Y S   VP+            + R   HG+R+ G    S+ P     L S  +    +S S            V       P  + +     
Subjt:  MVSTRRGYYSSQVPVPKKSVNPHVGPAVKNVRTNKHGVRLRGLSKVSSPPVSSAPLVSSSSSTTNTSTS----------SPVPSPPVNVPTVTSS-----

Query:  -SSSQDNIPLSRLLNHLSS-NAVPAPSN----SDHHQSSAST-----PT-----LDDNFTDPPPDSVSDPAPQSTP---TKVKSKTKR-------VSTQS
         S   D++PL+RL+  +++ NAVP   N    SD  Q S+S+     PT     +D N      DSV   A Q TP   T+ K   K+       ++T+ 
Subjt:  -SSSQDNIPLSRLLNHLSS-NAVPAPSN----SDHHQSSAST-----PT-----LDDNFTDPPPDSVSDPAPQSTP---TKVKSKTKR-------VSTQS

Query:  GRRQVPLHVNPVPIDGIFFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNLGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHI
        GR+++PL++  VPIDGIFFH E +V  WK+++QRRIA E ++SD HHSC++++ LI++A L  T+S++GP+YP+LIRE  VN+PT F++ SSPDY T+HI
Subjt:  GRRQVPLHVNPVPIDGIFFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNLGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHI

Query:  RGLPFSFSPHSLNTFLGITLPSD-SPSLPTSDDLASEIT
        RG  FS +   +N FLG  +  + +PS P++D LASE++
Subjt:  RGLPFSFSPHSLNTFLGITLPSD-SPSLPTSDDLASEIT

TrEMBL top hitse value%identityAlignment
A0A1S3BZ31 uncharacterized protein LOC1034951622.9e-3536.87Show/hide
Query:  MVSTRRGYYSSQVPVPKKSVNPHVGPAVKNVRTNKHGVRLRGLSKVSSPPVSSAPLVSSSSSTTNTSTS----------SPVPSPPVNVPTVTSS-----
        MV+TR+G Y S   VP+            + R   HG+R+ G    S+ P     L S  +    +S S            V       P  + +     
Subjt:  MVSTRRGYYSSQVPVPKKSVNPHVGPAVKNVRTNKHGVRLRGLSKVSSPPVSSAPLVSSSSSTTNTSTS----------SPVPSPPVNVPTVTSS-----

Query:  -SSSQDNIPLSRLLNHLSS-NAVPAPSN----SDHHQSSAST-----PT-----LDDNFTDPPPDSVSDPAPQSTP---TKVKSKTKR-------VSTQS
         S   D++PL+RL+  +++ NAVP   N    SD  Q S+S+     PT     +D N      DSV   A Q TP   T+ K   K+       ++T+ 
Subjt:  -SSSQDNIPLSRLLNHLSS-NAVPAPSN----SDHHQSSAST-----PT-----LDDNFTDPPPDSVSDPAPQSTP---TKVKSKTKR-------VSTQS

Query:  GRRQVPLHVNPVPIDGIFFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNLGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHI
        GR+++PL++  VPIDGIFFH E +V  WK+++QRRIA E ++SD HHSC++++ LI++A L  T+S++GP+YP+LIRE  VN+PT F++ SSPDY T+HI
Subjt:  GRRQVPLHVNPVPIDGIFFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNLGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHI

Query:  RGLPFSFSPHSLNTFLGITLPSD-SPSLPTSDDLASEIT
        RG  FS +   +N FLG  +  + +PS P++D LASE++
Subjt:  RGLPFSFSPHSLNTFLGITLPSD-SPSLPTSDDLASEIT

A0A1S3C0F4 uncharacterized protein LOC1034950531.3e-3539.58Show/hide
Query:  SSPVPSPPVNVPTVTSSSSSQDNIPLSRLLNHLSSNAVPAPSNSDHHQSSASTPTLDDNFTDPPPDSVSDPA---PQSTPTKVKSKTKR-------VSTQ
        SSP+ SP   +P + +   S   +P +  +    ++A    +  D+          D N   P  D+V   A   P S PT++K   K+       ++T+
Subjt:  SSPVPSPPVNVPTVTSSSSSQDNIPLSRLLNHLSSNAVPAPSNSDHHQSSASTPTLDDNFTDPPPDSVSDPA---PQSTPTKVKSKTKR-------VSTQ

Query:  SGRRQVPLHVNPVPIDGIFFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNLGPYYPKLIREMFVNIPTSFDNPSSPDYHTIH
        +GR+++PL++  VPIDGI FH E ++H+WK+V+QRRIA E ++SD HHSC+++M LI +A+L  T+S++ P+YP+LIRE  VN+PT+ ++PSSPDY T+H
Subjt:  SGRRQVPLHVNPVPIDGIFFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNLGPYYPKLIREMFVNIPTSFDNPSSPDYHTIH

Query:  IRGLPFSFSPHSLNTFLG-ITLPSDSPSLPTSDDLASEIT
        IRG  F+ SP  +N F+G +   + SPS  ++D LASE++
Subjt:  IRGLPFSFSPHSLNTFLG-ITLPSDSPSLPTSDDLASEIT

A0A5A7UQ31 Uncharacterized protein2.9e-3536.87Show/hide
Query:  MVSTRRGYYSSQVPVPKKSVNPHVGPAVKNVRTNKHGVRLRGLSKVSSPPVSSAPLVSSSSSTTNTSTS----------SPVPSPPVNVPTVTSS-----
        MV+TR+G Y S   VP+            + R   HG+R+ G    S+ P     L S  +    +S S            V       P  + +     
Subjt:  MVSTRRGYYSSQVPVPKKSVNPHVGPAVKNVRTNKHGVRLRGLSKVSSPPVSSAPLVSSSSSTTNTSTS----------SPVPSPPVNVPTVTSS-----

Query:  -SSSQDNIPLSRLLNHLSS-NAVPAPSN----SDHHQSSAST-----PT-----LDDNFTDPPPDSVSDPAPQSTP---TKVKSKTKR-------VSTQS
         S   D++PL+RL+  +++ NAVP   N    SD  Q S+S+     PT     +D N      DSV   A Q TP   T+ K   K+       ++T+ 
Subjt:  -SSSQDNIPLSRLLNHLSS-NAVPAPSN----SDHHQSSAST-----PT-----LDDNFTDPPPDSVSDPAPQSTP---TKVKSKTKR-------VSTQS

Query:  GRRQVPLHVNPVPIDGIFFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNLGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHI
        GR+++PL++  VPIDGIFFH E +V  WK+++QRRIA E ++SD HHSC++++ LI++A L  T+S++GP+YP+LIRE  VN+PT F++ SSPDY T+HI
Subjt:  GRRQVPLHVNPVPIDGIFFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNLGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHI

Query:  RGLPFSFSPHSLNTFLGITLPSD-SPSLPTSDDLASEIT
        RG  FS +   +N FLG  +  + +PS P++D LASE++
Subjt:  RGLPFSFSPHSLNTFLGITLPSD-SPSLPTSDDLASEIT

A0A5A7VN31 Uncharacterized protein2.0e-3651.9Show/hide
Query:  PQSTPTKVKSKTKRVSTQSGRRQVPLHVNPVPIDGIFFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNLGPYYPKLIREMFV
        P+S   K +   + ++T+ GR+++PL++  VPIDGI FH E  V +WKYV+QRR+A E +V D HHS L+VM LI ++    T+SN+G +YPKLI+E+ V
Subjt:  PQSTPTKVKSKTKRVSTQSGRRQVPLHVNPVPIDGIFFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNLGPYYPKLIREMFV

Query:  NIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGITLPSDS-PSLPTSDDLASEIT
        N+P+ FDNPSSP+Y+TIHIRGL F  SP  +N FLG T+ S S PS P++D LAS ++
Subjt:  NIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGITLPSDS-PSLPTSDDLASEIT

A0A5D3B7L1 Gag-pol polyprotein1.3e-3539.58Show/hide
Query:  SSPVPSPPVNVPTVTSSSSSQDNIPLSRLLNHLSSNAVPAPSNSDHHQSSASTPTLDDNFTDPPPDSVSDPA---PQSTPTKVKSKTKR-------VSTQ
        SSP+ SP   +P + +   S   +P +  +    ++A    +  D+          D N   P  D+V   A   P S PT++K   K+       ++T+
Subjt:  SSPVPSPPVNVPTVTSSSSSQDNIPLSRLLNHLSSNAVPAPSNSDHHQSSASTPTLDDNFTDPPPDSVSDPA---PQSTPTKVKSKTKR-------VSTQ

Query:  SGRRQVPLHVNPVPIDGIFFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNLGPYYPKLIREMFVNIPTSFDNPSSPDYHTIH
        +GR+++PL++  VPIDGI FH E ++H+WK+V+QRRIA E ++SD HHSC+++M LI +A+L  T+S++ P+YP+LIRE  VN+PT+ ++PSSPDY T+H
Subjt:  SGRRQVPLHVNPVPIDGIFFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNLGPYYPKLIREMFVNIPTSFDNPSSPDYHTIH

Query:  IRGLPFSFSPHSLNTFLG-ITLPSDSPSLPTSDDLASEIT
        IRG  F+ SP  +N F+G +   + SPS  ++D LASE++
Subjt:  IRGLPFSFSPHSLNTFLG-ITLPSDSPSLPTSDDLASEIT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAGCACAAGACGAGGTTATTACTCTTCTCAAGTTCCTGTTCCTAAGAAATCTGTCAACCCACATGTTGGTCCCGCTGTAAAAAACGTGCGTACTAACAAACATGG
GGTCCGTTTGCGGGGTTTGTCCAAAGTCTCTTCACCTCCTGTGTCTTCCGCTCCTCTGGTATCTTCTTCTTCTTCAACTACTAATACTTCTACCTCTTCTCCTGTTCCAT
CTCCCCCTGTTAATGTTCCTACAGTTACTTCTTCGTCCTCGTCTCAAGACAACATTCCTTTATCCCGCCTTCTTAATCACCTTTCCTCAAATGCTGTCCCTGCTCCTTCC
AATTCGGACCATCACCAGTCTTCTGCTTCCACTCCCACTCTTGATGATAATTTCACTGATCCTCCTCCTGATTCGGTTTCGGATCCTGCTCCTCAATCTACTCCAACCAA
AGTTAAATCCAAAACTAAAAGAGTGTCTACCCAGTCTGGTCGAAGACAGGTTCCTTTGCATGTGAATCCTGTTCCCATAGATGGCATCTTCTTTCATCACGAGTCTCATG
TCCATAAATGGAAATACGTGATTCAGAGACGTATTGCTGCAGAGTCAGATGTTTCTGATGATCATCATTCCTGCTTAGCTGTTATGACTCTAATTTCTCAAGCCAAACTT
CTGACCACTGTCTCTAACCTTGGCCCTTACTATCCCAAGCTGATAAGAGAAATGTTTGTCAACATTCCAACGTCTTTTGACAATCCTAGCAGTCCTGATTATCATACCAT
CCATATCAGAGGATTGCCCTTCTCCTTTTCCCCTCATTCCTTGAATACCTTTCTTGGTATTACTCTTCCTTCTGATTCTCCCTCTCTTCCTACCTCTGATGATCTTGCCT
CTGAGATAACATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTAGCACAAGACGAGGTTATTACTCTTCTCAAGTTCCTGTTCCTAAGAAATCTGTCAACCCACATGTTGGTCCCGCTGTAAAAAACGTGCGTACTAACAAACATGG
GGTCCGTTTGCGGGGTTTGTCCAAAGTCTCTTCACCTCCTGTGTCTTCCGCTCCTCTGGTATCTTCTTCTTCTTCAACTACTAATACTTCTACCTCTTCTCCTGTTCCAT
CTCCCCCTGTTAATGTTCCTACAGTTACTTCTTCGTCCTCGTCTCAAGACAACATTCCTTTATCCCGCCTTCTTAATCACCTTTCCTCAAATGCTGTCCCTGCTCCTTCC
AATTCGGACCATCACCAGTCTTCTGCTTCCACTCCCACTCTTGATGATAATTTCACTGATCCTCCTCCTGATTCGGTTTCGGATCCTGCTCCTCAATCTACTCCAACCAA
AGTTAAATCCAAAACTAAAAGAGTGTCTACCCAGTCTGGTCGAAGACAGGTTCCTTTGCATGTGAATCCTGTTCCCATAGATGGCATCTTCTTTCATCACGAGTCTCATG
TCCATAAATGGAAATACGTGATTCAGAGACGTATTGCTGCAGAGTCAGATGTTTCTGATGATCATCATTCCTGCTTAGCTGTTATGACTCTAATTTCTCAAGCCAAACTT
CTGACCACTGTCTCTAACCTTGGCCCTTACTATCCCAAGCTGATAAGAGAAATGTTTGTCAACATTCCAACGTCTTTTGACAATCCTAGCAGTCCTGATTATCATACCAT
CCATATCAGAGGATTGCCCTTCTCCTTTTCCCCTCATTCCTTGAATACCTTTCTTGGTATTACTCTTCCTTCTGATTCTCCCTCTCTTCCTACCTCTGATGATCTTGCCT
CTGAGATAACATGA
Protein sequenceShow/hide protein sequence
MVSTRRGYYSSQVPVPKKSVNPHVGPAVKNVRTNKHGVRLRGLSKVSSPPVSSAPLVSSSSSTTNTSTSSPVPSPPVNVPTVTSSSSSQDNIPLSRLLNHLSSNAVPAPS
NSDHHQSSASTPTLDDNFTDPPPDSVSDPAPQSTPTKVKSKTKRVSTQSGRRQVPLHVNPVPIDGIFFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKL
LTTVSNLGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGITLPSDSPSLPTSDDLASEIT