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PI0026606 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026606
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 2-like
Genome locationchr04:24070097..24070652
RNA-Seq ExpressionPI0026606
SyntenyPI0026606
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0032196 - transposition (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061274.1 uncharacterized protein E6C27_scaffold455G001170 [Cucumis melo var. makuwa]7.2e-3769.05Show/hide
Query:  MDDKTSCRSSDVINYMKIHHGVNVSYDKAWRGCEIALNSIRNTPEASYAMLSAFSDALIRNNAGTYTSEEADDE-------------------------V
        M+DK  CR SDVINYMKIHHGVN+SYDKAWRG EIALNSIR TPE SYAMLSAFSDALIRNN GTYT+EEADDE                         V
Subjt:  MDDKTSCRSSDVINYMKIHHGVNVSYDKAWRGCEIALNSIRNTPEASYAMLSAFSDALIRNNAGTYTSEEADDE-------------------------V

Query:  DGAAMKNKYLDTLMSPCTIDGNSQIV
        DGAAMKNKYL TL+S CTID NSQIV
Subjt:  DGAAMKNKYLDTLMSPCTIDGNSQIV
KAA0064137.1 MuDRA-like transposase [Cucumis melo var. makuwa]1.4e-3568.25Show/hide
Query:  MDDKTSCRSSDVINYMKIHHGVNVSYDKAWRGCEIALNSIRNTPEASYAMLSAFSDALIRNNAGTYTSEEADDE-------------------------V
        M+DK  C  S+VINYMKIHH VNVSYDKAWRG EIALNSIR TPE SYAMLSAFSDALIRNN GTYT+EEADDE                         V
Subjt:  MDDKTSCRSSDVINYMKIHHGVNVSYDKAWRGCEIALNSIRNTPEASYAMLSAFSDALIRNNAGTYTSEEADDE-------------------------V

Query:  DGAAMKNKYLDTLMSPCTIDGNSQIV
        DGAAMKNKYL TL+S CTIDGNSQIV
Subjt:  DGAAMKNKYLDTLMSPCTIDGNSQIV
TYK29863.1 MuDRA-like transposase [Cucumis melo var. makuwa]4.2e-3769.6Show/hide
Query:  DDKTSCRSSDVINYMKIHHGVNVSYDKAWRGCEIALNSIRNTPEASYAMLSAFSDALIRNNAGTYTSEEADDE-------------------------VD
        +DK  CR SDVINYMKIHHGVN+SYDKAWRG EIALNSIR TPE SYAMLSAFSDALIRNN GTYT+EEADDE                         VD
Subjt:  DDKTSCRSSDVINYMKIHHGVNVSYDKAWRGCEIALNSIRNTPEASYAMLSAFSDALIRNNAGTYTSEEADDE-------------------------VD

Query:  GAAMKNKYLDTLMSPCTIDGNSQIV
        GAAMKNKYL TL+S CTIDGNSQIV
Subjt:  GAAMKNKYLDTLMSPCTIDGNSQIV
XP_008455803.1 PREDICTED: uncharacterized protein LOC103495899 [Cucumis melo]1.4e-3568Show/hide
Query:  DDKTSCRSSDVINYMKIHHGVNVSYDKAWRGCEIALNSIRNTPEASYAMLSAFSDALIRNNAGTYTSEEADDE-------------------------VD
        +DK  CR SDVINYMKIHH VN+SYDKAW G EIALNSIR TPE SYAMLSAFSDALIRNN GTYT+EEADDE                         VD
Subjt:  DDKTSCRSSDVINYMKIHHGVNVSYDKAWRGCEIALNSIRNTPEASYAMLSAFSDALIRNNAGTYTSEEADDE-------------------------VD

Query:  GAAMKNKYLDTLMSPCTIDGNSQIV
        GAAMKNKYL TL+S CTIDGNSQIV
Subjt:  GAAMKNKYLDTLMSPCTIDGNSQIV
XP_016902696.1 PREDICTED: uncharacterized protein LOC107991824 [Cucumis melo]5.5e-3768.25Show/hide
Query:  MDDKTSCRSSDVINYMKIHHGVNVSYDKAWRGCEIALNSIRNTPEASYAMLSAFSDALIRNNAGTYTSEEADDE-------------------------V
        M+DK  CR SDVINYMKIHH VN+SYDKAWRG EIALNSIR TPE SYAMLSAFSDALIRNN GTYT+EEADDE                         V
Subjt:  MDDKTSCRSSDVINYMKIHHGVNVSYDKAWRGCEIALNSIRNTPEASYAMLSAFSDALIRNNAGTYTSEEADDE-------------------------V

Query:  DGAAMKNKYLDTLMSPCTIDGNSQIV
        DGAAMKNKYL TL+S CT+DGNSQIV
Subjt:  DGAAMKNKYLDTLMSPCTIDGNSQIV
TrEMBL top hitse value%identityAlignment
A0A1S3C300 uncharacterized protein LOC1034958996.5e-3668Show/hide
Query:  DDKTSCRSSDVINYMKIHHGVNVSYDKAWRGCEIALNSIRNTPEASYAMLSAFSDALIRNNAGTYTSEEADDE-------------------------VD
        +DK  CR SDVINYMKIHH VN+SYDKAW G EIALNSIR TPE SYAMLSAFSDALIRNN GTYT+EEADDE                         VD
Subjt:  DDKTSCRSSDVINYMKIHHGVNVSYDKAWRGCEIALNSIRNTPEASYAMLSAFSDALIRNNAGTYTSEEADDE-------------------------VD

Query:  GAAMKNKYLDTLMSPCTIDGNSQIV
        GAAMKNKYL TL+S CTIDGNSQIV
Subjt:  GAAMKNKYLDTLMSPCTIDGNSQIV
A0A1S4E392 uncharacterized protein LOC1079918242.7e-3768.25Show/hide
Query:  MDDKTSCRSSDVINYMKIHHGVNVSYDKAWRGCEIALNSIRNTPEASYAMLSAFSDALIRNNAGTYTSEEADDE-------------------------V
        M+DK  CR SDVINYMKIHH VN+SYDKAWRG EIALNSIR TPE SYAMLSAFSDALIRNN GTYT+EEADDE                         V
Subjt:  MDDKTSCRSSDVINYMKIHHGVNVSYDKAWRGCEIALNSIRNTPEASYAMLSAFSDALIRNNAGTYTSEEADDE-------------------------V

Query:  DGAAMKNKYLDTLMSPCTIDGNSQIV
        DGAAMKNKYL TL+S CT+DGNSQIV
Subjt:  DGAAMKNKYLDTLMSPCTIDGNSQIV
A0A5A7V1Z6 CCHC-type domain-containing protein3.5e-3769.05Show/hide
Query:  MDDKTSCRSSDVINYMKIHHGVNVSYDKAWRGCEIALNSIRNTPEASYAMLSAFSDALIRNNAGTYTSEEADDE-------------------------V
        M+DK  CR SDVINYMKIHHGVN+SYDKAWRG EIALNSIR TPE SYAMLSAFSDALIRNN GTYT+EEADDE                         V
Subjt:  MDDKTSCRSSDVINYMKIHHGVNVSYDKAWRGCEIALNSIRNTPEASYAMLSAFSDALIRNNAGTYTSEEADDE-------------------------V

Query:  DGAAMKNKYLDTLMSPCTIDGNSQIV
        DGAAMKNKYL TL+S CTID NSQIV
Subjt:  DGAAMKNKYLDTLMSPCTIDGNSQIV
A0A5A7VAU3 MuDRA-like transposase6.5e-3668.25Show/hide
Query:  MDDKTSCRSSDVINYMKIHHGVNVSYDKAWRGCEIALNSIRNTPEASYAMLSAFSDALIRNNAGTYTSEEADDE-------------------------V
        M+DK  C  S+VINYMKIHH VNVSYDKAWRG EIALNSIR TPE SYAMLSAFSDALIRNN GTYT+EEADDE                         V
Subjt:  MDDKTSCRSSDVINYMKIHHGVNVSYDKAWRGCEIALNSIRNTPEASYAMLSAFSDALIRNNAGTYTSEEADDE-------------------------V

Query:  DGAAMKNKYLDTLMSPCTIDGNSQIV
        DGAAMKNKYL TL+S CTIDGNSQIV
Subjt:  DGAAMKNKYLDTLMSPCTIDGNSQIV
A0A5D3E198 MuDRA-like transposase2.0e-3769.6Show/hide
Query:  DDKTSCRSSDVINYMKIHHGVNVSYDKAWRGCEIALNSIRNTPEASYAMLSAFSDALIRNNAGTYTSEEADDE-------------------------VD
        +DK  CR SDVINYMKIHHGVN+SYDKAWRG EIALNSIR TPE SYAMLSAFSDALIRNN GTYT+EEADDE                         VD
Subjt:  DDKTSCRSSDVINYMKIHHGVNVSYDKAWRGCEIALNSIRNTPEASYAMLSAFSDALIRNNAGTYTSEEADDE-------------------------VD

Query:  GAAMKNKYLDTLMSPCTIDGNSQIV
        GAAMKNKYL TL+S CTIDGNSQIV
Subjt:  GAAMKNKYLDTLMSPCTIDGNSQIV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGACAAGACTTCATGTCGTTCTTCTGACGTTATTAATTATATGAAGATTCATCATGGAGTCAATGTAAGTTATGACAAGGCTTGGAGGGGGTGTGAAATTGCTTT
GAATTCAATTAGGAATACTCCGGAGGCCTCATATGCCATGTTATCAGCATTCTCGGATGCACTGATCCGAAACAACGCAGGAACATATACGTCTGAAGAAGCAGACGACG
AAGTTGATGGTGCAGCCATGAAGAATAAGTATCTTGATACGCTAATGTCTCCATGCACTATTGATGGTAATTCTCAAATTGTGTCTGGAATTACAATCCTGTATCTGGAA
TTACAACCTATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGACAAGACTTCATGTCGTTCTTCTGACGTTATTAATTATATGAAGATTCATCATGGAGTCAATGTAAGTTATGACAAGGCTTGGAGGGGGTGTGAAATTGCTTT
GAATTCAATTAGGAATACTCCGGAGGCCTCATATGCCATGTTATCAGCATTCTCGGATGCACTGATCCGAAACAACGCAGGAACATATACGTCTGAAGAAGCAGACGACG
AAGTTGATGGTGCAGCCATGAAGAATAAGTATCTTGATACGCTAATGTCTCCATGCACTATTGATGGTAATTCTCAAATTGTGTCTGGAATTACAATCCTGTATCTGGAA
TTACAACCTATTTGA
Protein sequenceShow/hide protein sequence
MDDKTSCRSSDVINYMKIHHGVNVSYDKAWRGCEIALNSIRNTPEASYAMLSAFSDALIRNNAGTYTSEEADDEVDGAAMKNKYLDTLMSPCTIDGNSQIVSGITILYLE
LQPI