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PI0026672 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026672
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDynein light chain
Genome locationchr08:22458609..22459570
RNA-Seq ExpressionPI0026672
SyntenyPI0026672
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8518956.1 hypothetical protein F0562_016270 [Nyssa sinensis]7.7e-3162.28Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVYFLLTFRIFFILWPGMALCGGQAFGGCITHLCGSFIFFHVDTMEFLIFKDGRD
        MLEGKAV+RETDMP+ +QSHV+ELAY+ALD HE SDCQSIAH+IKQ       +      P      G+ FG CITHLCGSFIFF VD MEFL+FKDG+D
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVYFLLTFRIFFILWPGMALCGGQAFGGCITHLCGSFIFFHVDTMEFLIFKDGRD

Query:  CSKSVEETVGVCQK
         ++S EE +GV QK
Subjt:  CSKSVEETVGVCQK

KGN58830.1 hypothetical protein Csa_001625 [Cucumis sativus]7.5e-4278.95Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVYFLLTFRIFFILWPGMALCGGQAFGGCITHLCGSFIFFHVDTMEFLIFKDGRD
        MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQ       R      P      G+AFGGCITHLCGS+IFFHVDTMEFL+FKDGRD
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVYFLLTFRIFFILWPGMALCGGQAFGGCITHLCGSFIFFHVDTMEFLIFKDGRD

Query:  CSKSVEETVGVCQK
        C KSVEETVGVC+K
Subjt:  CSKSVEETVGVCQK

PON90790.1 Dynein light chain [Trema orientale]4.5e-3163.16Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVYFLLTFRIFFILWPGMALCGGQAFGGCITHLCGSFIFFHVDTMEFLIFKDGRD
        MLEGKAVVRETDMP+ +QSHV+ELAYKALD HEVSDCQSIA++IKQ       +      P      G+ FG CITHLCGSFIFFHV+ MEFLIFKDG+D
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVYFLLTFRIFFILWPGMALCGGQAFGGCITHLCGSFIFFHVDTMEFLIFKDGRD

Query:  CSKSVEETVGVCQK
         +++++E +GV QK
Subjt:  CSKSVEETVGVCQK

XP_008442502.1 PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis melo]6.8e-4380.7Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVYFLLTFRIFFILWPGMALCGGQAFGGCITHLCGSFIFFHVDTMEFLIFKDGRD
        MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQ       R      P      G+AFGGCITHLCGSFIFFHVDTMEFL+FKDGRD
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVYFLLTFRIFFILWPGMALCGGQAFGGCITHLCGSFIFFHVDTMEFLIFKDGRD

Query:  CSKSVEETVGVCQK
        CSKSVEETVGVC+K
Subjt:  CSKSVEETVGVCQK

XP_022145583.1 dynein light chain-like [Momordica charantia]5.5e-3774.56Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVYFLLTFRIFFILWPGMALCGGQAFGGCITHLCGSFIFFHVDTMEFLIFKDGRD
        MLEGKA VRETDMP+GIQSHVLELAYKALD HEVSDCQSIA FIKQ       R      P      G+AFGGCITHLCGSFIFFHVD MEFLIFKDGRD
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVYFLLTFRIFFILWPGMALCGGQAFGGCITHLCGSFIFFHVDTMEFLIFKDGRD

Query:  CSKSVEETVGVCQK
         SKS+EET+GV QK
Subjt:  CSKSVEETVGVCQK

TrEMBL top hitse value%identityAlignment
A0A0A0LA26 Dynein light chain3.6e-4278.95Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVYFLLTFRIFFILWPGMALCGGQAFGGCITHLCGSFIFFHVDTMEFLIFKDGRD
        MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQ       R      P      G+AFGGCITHLCGS+IFFHVDTMEFL+FKDGRD
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVYFLLTFRIFFILWPGMALCGGQAFGGCITHLCGSFIFFHVDTMEFLIFKDGRD

Query:  CSKSVEETVGVCQK
        C KSVEETVGVC+K
Subjt:  CSKSVEETVGVCQK

A0A1S3B5U2 Dynein light chain3.3e-4380.7Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVYFLLTFRIFFILWPGMALCGGQAFGGCITHLCGSFIFFHVDTMEFLIFKDGRD
        MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQ       R      P      G+AFGGCITHLCGSFIFFHVDTMEFL+FKDGRD
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVYFLLTFRIFFILWPGMALCGGQAFGGCITHLCGSFIFFHVDTMEFLIFKDGRD

Query:  CSKSVEETVGVCQK
        CSKSVEETVGVC+K
Subjt:  CSKSVEETVGVCQK

A0A2P5EZ32 Dynein light chain2.2e-3163.16Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVYFLLTFRIFFILWPGMALCGGQAFGGCITHLCGSFIFFHVDTMEFLIFKDGRD
        MLEGKAVVRETDMP+ +QSHV+ELAYKALD HEVSDCQSIA++IKQ       +      P      G+ FG CITHLCGSFIFFHV+ MEFLIFKDG+D
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVYFLLTFRIFFILWPGMALCGGQAFGGCITHLCGSFIFFHVDTMEFLIFKDGRD

Query:  CSKSVEETVGVCQK
         +++++E +GV QK
Subjt:  CSKSVEETVGVCQK

A0A5J4ZMN8 Dynein light chain3.7e-3162.28Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVYFLLTFRIFFILWPGMALCGGQAFGGCITHLCGSFIFFHVDTMEFLIFKDGRD
        MLEGKAV+RETDMP+ +QSHV+ELAY+ALD HE SDCQSIAH+IKQ       +      P      G+ FG CITHLCGSFIFF VD MEFL+FKDG+D
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVYFLLTFRIFFILWPGMALCGGQAFGGCITHLCGSFIFFHVDTMEFLIFKDGRD

Query:  CSKSVEETVGVCQK
         ++S EE +GV QK
Subjt:  CSKSVEETVGVCQK

A0A6J1CWC6 Dynein light chain2.7e-3774.56Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVYFLLTFRIFFILWPGMALCGGQAFGGCITHLCGSFIFFHVDTMEFLIFKDGRD
        MLEGKA VRETDMP+GIQSHVLELAYKALD HEVSDCQSIA FIKQ       R      P      G+AFGGCITHLCGSFIFFHVD MEFLIFKDGRD
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVYFLLTFRIFFILWPGMALCGGQAFGGCITHLCGSFIFFHVDTMEFLIFKDGRD

Query:  CSKSVEETVGVCQK
         SKS+EET+GV QK
Subjt:  CSKSVEETVGVCQK

SwissProt top hitse value%identityAlignment
O02414 Dynein light chain LC6, flagellar outer arm2.2e-0429.59Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVYFLLTFRIFFILWPGMALCGGQAFGGCITHLCGSFIFFHVDTMEFLIFKDG
        M E KAV++  DMP+ +Q   ++ A +AL++  +   + IA +IK+ +     + +   W  +    G+ FG  +TH    FI+F++  +  L+FK G
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVYFLLTFRIFFILWPGMALCGGQAFGGCITHLCGSFIFFHVDTMEFLIFKDG

Q22799 Dynein light chain 1, cytoplasmic8.4e-0427.55Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVYFLLTFRIFFILWPGMALCGGQAFGGCITHLCGSFIFFHVDTMEFLIFKDG
        M++ KAV++  DM   +Q   ++ A +AL+++ +   + IA +IK+ +     + +   W  +    G+ FG  +TH    FI+F++  +  L+FK G
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVYFLLTFRIFFILWPGMALCGGQAFGGCITHLCGSFIFFHVDTMEFLIFKDG

Q94748 Probable dynein light chain1.3e-0431.63Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVYFLLTFRIFFILWPGMALCGGQAFGGCITHLCGSFIFFHVDTMEFLIFKDG
        M E KAV++  DM + +Q   +  A  ALD++E+   + +A +IK+ +     R +   W  +    G+ FG  +TH    FI+F++    FL+FK G
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVYFLLTFRIFFILWPGMALCGGQAFGGCITHLCGSFIFFHVDTMEFLIFKDG

Q94758 Dynein light chain6.9e-0632.65Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVYFLLTFRIFFILWPGMALCGGQAFGGCITHLCGSFIFFHVDTMEFLIFKDG
        M E KAV++  DM + +Q   + +A  A+D+H++   + IA  IK+ +     R +   W  +    G+ FG  +TH   +FI+F++D   FL+FK G
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVYFLLTFRIFFILWPGMALCGGQAFGGCITHLCGSFIFFHVDTMEFLIFKDG

Q9UR05 Dynein light chain 1, cytoplasmic4.9e-0430.11Show/hide
Query:  AVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVYFLLTFRIFFILWPGMALCGGQAFGGCITHLCGSFIFFHVDTMEFLIFKDG
        AV++  DM + +Q   +  A +A+++  +   + IA FIK+ +     + F   W  +    G+ FG  +TH    FI+F++ T+ FL+FK G
Subjt:  AVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVYFLLTFRIFFILWPGMALCGGQAFGGCITHLCGSFIFFHVDTMEFLIFKDG

Arabidopsis top hitse value%identityAlignment
AT1G52240.1 RHO guanyl-nucleotide exchange factor 117.0e-0647.92Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVY
        MLEGKA+V ++DMP  +Q   +  A +ALD  +V DC+SIA  IK+ +
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVY

AT1G52240.2 RHO guanyl-nucleotide exchange factor 111.5e-1140.62Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVYFLLTFRIFFILWPGMALCGGQAFGGCITHLCGSFIFFHVDTMEFLIFK
        MLEGKA+V ++DMP  +Q   +  A +ALD  +V DC+SIA  IK+ +             G     G  FG   TH  G+FI+F ++T++FLIFK
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVYFLLTFRIFFILWPGMALCGGQAFGGCITHLCGSFIFFHVDTMEFLIFK

AT3G16120.1 Dynein light chain type 1 family protein7.3e-1141.67Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVYFLLTFRIFFILWPGMALCGGQAFGGCITHLCGSFIFFHVDTMEFLIFK
        MLEGKA V ETDMP  +Q   +++A ++LD  +V D  SIA  IK+ +             G     G  FG   TH  G+FI+FH+ T+ FLIFK
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVYFLLTFRIFFILWPGMALCGGQAFGGCITHLCGSFIFFHVDTMEFLIFK

AT4G27360.1 Dynein light chain type 1 family protein4.7e-1040.62Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVYFLLTFRIFFILWPGMALCGGQAFGGCITHLCGSFIFFHVDTMEFLIFK
        MLEGKAV+ +TDM Q ++   L LA KALD  +V++   IA FIK+ +     R +   W  +    G  FG  +TH  G FI F V ++  L+FK
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVYFLLTFRIFFILWPGMALCGGQAFGGCITHLCGSFIFFHVDTMEFLIFK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAGGGCAAAGCTGTGGTCCGCGAAACAGACATGCCACAGGGGATTCAGAGCCATGTCCTTGAGTTGGCTTATAAAGCACTTGATCAACACGAAGTTTCTGACTG
TCAATCTATTGCACATTTCATCAAACAGGTTTATTTTCTTTTAACATTCAGAATCTTCTTTATCTTATGGCCCGGCATGGCATTGTGTGGCGGGCAAGCGTTCGGAGGTT
GCATTACACATCTATGTGGGAGTTTCATCTTCTTCCACGTGGATACCATGGAGTTTCTCATCTTTAAGGACGGAAGAGACTGCTCCAAAAGTGTCGAAGAGACTGTTGGA
GTTTGCCAGAAATGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGAGGGCAAAGCTGTGGTCCGCGAAACAGACATGCCACAGGGGATTCAGAGCCATGTCCTTGAGTTGGCTTATAAAGCACTTGATCAACACGAAGTTTCTGACTG
TCAATCTATTGCACATTTCATCAAACAGGTTTATTTTCTTTTAACATTCAGAATCTTCTTTATCTTATGGCCCGGCATGGCATTGTGTGGCGGGCAAGCGTTCGGAGGTT
GCATTACACATCTATGTGGGAGTTTCATCTTCTTCCACGTGGATACCATGGAGTTTCTCATCTTTAAGGACGGAAGAGACTGCTCCAAAAGTGTCGAAGAGACTGTTGGA
GTTTGCCAGAAATGTTAA
Protein sequenceShow/hide protein sequence
MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQVYFLLTFRIFFILWPGMALCGGQAFGGCITHLCGSFIFFHVDTMEFLIFKDGRDCSKSVEETVG
VCQKC