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PI0026676 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026676
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRibosomal protein S21 family protein
Genome locationchr04:11145875..11150110
RNA-Seq ExpressionPI0026676
SyntenyPI0026676
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001911 - Ribosomal protein S21


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048381.1 Ribosomal protein S21 family protein isoform 1 [Cucumis melo var. makuwa]1.9e-4194.06Show/hide
Query:  MNSLARNISCSIRSSIHTNCLQHQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIYHIKDSEKRVLARKTLERKIRSQDLARKLKAIIVKKV
        MNSLARNISCSIRSSIHTNCLQ+QQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQI+HIK+SEKRVLARKTLERKIRSQDLARKLK I++KKV
Subjt:  MNSLARNISCSIRSSIHTNCLQHQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIYHIKDSEKRVLARKTLERKIRSQDLARKLKAIIVKKV

Query:  R
        R
Subjt:  R
KAG6581566.1 Cycloartenol-C-24-methyltransferase, partial [Cucurbita argyrosperma subsp. sororia]1.3e-3782.41Show/hide
Query:  MNSLARNISCSIRSSIHTNCLQH-----QQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIYHIKDSEKRVLARKTLERKIRSQDLARKLKAI
        MNSL+RN+SCSIRSS+HTNCLQH     QQWRGIRVKVL G LERALT LQRKM+SSGIERLIKREQ +HIK+SEKRVLARK LERKIRSQDLARKLKAI
Subjt:  MNSLARNISCSIRSSIHTNCLQH-----QQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIYHIKDSEKRVLARKTLERKIRSQDLARKLKAI

Query:  IVKKVRGM
        ++KKVRG+
Subjt:  IVKKVRGM
XP_004149720.1 uncharacterized protein LOC101216913 [Cucumis sativus]3.3e-4190.29Show/hide
Query:  MNSLARNISCSIRSSIHTNCLQHQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIYHIKDSEKRVLARKTLERKIRSQDLARKLKAIIVKKV
        MNSLARNISCSIRSSI TNCLQHQQWRGIRVKVL+GGLERALTVLQRKMQSSGIERLIKREQ++HIK+SEKRVLARKTLERKI+S+DLARKLKAI++KKV
Subjt:  MNSLARNISCSIRSSIHTNCLQHQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIYHIKDSEKRVLARKTLERKIRSQDLARKLKAIIVKKV

Query:  RGM
        RG+
Subjt:  RGM
XP_008461813.1 PREDICTED: uncharacterized protein LOC103500324 [Cucumis melo]3.0e-4293.2Show/hide
Query:  MNSLARNISCSIRSSIHTNCLQHQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIYHIKDSEKRVLARKTLERKIRSQDLARKLKAIIVKKV
        MNSLARNISCSIRSSIHTNCLQ+QQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQI+HIK+SEKRVLARKTLERKIRSQDLARKLK I++KKV
Subjt:  MNSLARNISCSIRSSIHTNCLQHQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIYHIKDSEKRVLARKTLERKIRSQDLARKLKAIIVKKV

Query:  RGM
        RG+
Subjt:  RGM
XP_022934889.1 uncharacterized protein LOC111441929 [Cucurbita moschata]1.3e-3782.41Show/hide
Query:  MNSLARNISCSIRSSIHTNCLQH-----QQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIYHIKDSEKRVLARKTLERKIRSQDLARKLKAI
        MNSL+RN+SCSIRSS+HTNCLQH     QQWRGIRVKVL G LERALT LQRKM+SSGIERLIKREQ +HIK+SEKRVLARK LERKIRSQDLARKLKAI
Subjt:  MNSLARNISCSIRSSIHTNCLQH-----QQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIYHIKDSEKRVLARKTLERKIRSQDLARKLKAI

Query:  IVKKVRGM
        ++KKVRG+
Subjt:  IVKKVRGM
TrEMBL top hitse value%identityAlignment
A0A0A0LCD1 Uncharacterized protein1.6e-4190.29Show/hide
Query:  MNSLARNISCSIRSSIHTNCLQHQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIYHIKDSEKRVLARKTLERKIRSQDLARKLKAIIVKKV
        MNSLARNISCSIRSSI TNCLQHQQWRGIRVKVL+GGLERALTVLQRKMQSSGIERLIKREQ++HIK+SEKRVLARKTLERKI+S+DLARKLKAI++KKV
Subjt:  MNSLARNISCSIRSSIHTNCLQHQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIYHIKDSEKRVLARKTLERKIRSQDLARKLKAIIVKKV

Query:  RGM
        RG+
Subjt:  RGM
A0A1S3CG17 uncharacterized protein LOC1035003241.5e-4293.2Show/hide
Query:  MNSLARNISCSIRSSIHTNCLQHQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIYHIKDSEKRVLARKTLERKIRSQDLARKLKAIIVKKV
        MNSLARNISCSIRSSIHTNCLQ+QQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQI+HIK+SEKRVLARKTLERKIRSQDLARKLK I++KKV
Subjt:  MNSLARNISCSIRSSIHTNCLQHQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIYHIKDSEKRVLARKTLERKIRSQDLARKLKAIIVKKV

Query:  RGM
        RG+
Subjt:  RGM
A0A5A7U491 Ribosomal protein S21 family protein isoform 19.4e-4294.06Show/hide
Query:  MNSLARNISCSIRSSIHTNCLQHQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIYHIKDSEKRVLARKTLERKIRSQDLARKLKAIIVKKV
        MNSLARNISCSIRSSIHTNCLQ+QQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQI+HIK+SEKRVLARKTLERKIRSQDLARKLK I++KKV
Subjt:  MNSLARNISCSIRSSIHTNCLQHQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIYHIKDSEKRVLARKTLERKIRSQDLARKLKAIIVKKV

Query:  R
        R
Subjt:  R
A0A6J1F3V2 uncharacterized protein LOC1114419296.3e-3882.41Show/hide
Query:  MNSLARNISCSIRSSIHTNCLQH-----QQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIYHIKDSEKRVLARKTLERKIRSQDLARKLKAI
        MNSL+RN+SCSIRSS+HTNCLQH     QQWRGIRVKVL G LERALT LQRKM+SSGIERLIKREQ +HIK+SEKRVLARK LERKIRSQDLARKLKAI
Subjt:  MNSLARNISCSIRSSIHTNCLQH-----QQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIYHIKDSEKRVLARKTLERKIRSQDLARKLKAI

Query:  IVKKVRGM
        ++KKVRG+
Subjt:  IVKKVRGM
A0A6J1J5L6 uncharacterized protein LOC1114815078.2e-3882.41Show/hide
Query:  MNSLARNISCSIRSSIHTNCLQH-----QQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIYHIKDSEKRVLARKTLERKIRSQDLARKLKAI
        MNSL+RN+SCSIRSS+HTNCL+H     QQWRGIRVKVL G LERALT LQRKMQSSGIERLIKREQ +HIK+SEKRVLARK LERKIRSQDLARKLKAI
Subjt:  MNSLARNISCSIRSSIHTNCLQH-----QQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIYHIKDSEKRVLARKTLERKIRSQDLARKLKAI

Query:  IVKKVRGM
        ++KKVRG+
Subjt:  IVKKVRGM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G26360.1 Ribosomal protein S21 family protein3.3e-2357.69Show/hide
Query:  MNSLARNISCSI-RSSIHTNCLQHQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIYHIKDSEKRVLARKTLERKIRSQDLARKLKAIIVKK
        MN++A+ ++  + R S++    Q QQ RGIRVKV    L++ALT+LQ+KMQSSG+ERLIK  Q +HIK+SEK+VLARK LER+I+S D ARKL++I++KK
Subjt:  MNSLARNISCSI-RSSIHTNCLQHQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIYHIKDSEKRVLARKTLERKIRSQDLARKLKAIIVKK

Query:  VRGM
        VRG+
Subjt:  VRGM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTCGTTGGCGCGGAACATTTCATGCTCCATCAGATCTTCCATTCACACCAATTGTCTACAGCACCAGCAATGGAGGGGGATCCGAGTGAAGGTACTGAAAGGGGG
TCTAGAGCGGGCACTGACTGTTCTGCAAAGGAAGATGCAATCCAGCGGAATCGAGCGACTGATTAAGCGTGAACAAATTTATCATATCAAGGATTCCGAGAAACGAGTTT
TGGCCAGAAAGACTTTGGAGCGCAAAATTCGATCGCAGGACCTCGCTCGCAAACTCAAAGCCATCATTGTAAAGAAAGTCAGGGGTATGTAA
mRNA sequenceShow/hide mRNA sequence
TTAAGGGGAAGATAATGCGCATCTAATTATCTAATATTTATAATAAATATGTATTTTTTATAAAATGGTAAGGGTAAAAGGGGCCTACATAGCCCAAAACAGTTTTCGTT
TCACGCCGTCAAACCCTATCTCTCTTCGCAACCTTTCCTCTTTTTCCTTCCTTCCAAGTTTCGACCGTCTTTCACCGCCGCACCTCACTCTCTCACGGCCAGCTTCCATC
GCCGCCACCTCATGTATTTGTAATAACCACCACCTGTCCGCTACTTCTCCTGGCGTATTACATCTCCTGTGAGAACGACAAACAGAGGGAAATGAACTCGTTGGCGCGGA
ACATTTCATGCTCCATCAGATCTTCCATTCACACCAATTGTCTACAGCACCAGCAATGGAGGGGGATCCGAGTGAAGGTACTGAAAGGGGGTCTAGAGCGGGCACTGACT
GTTCTGCAAAGGAAGATGCAATCCAGCGGAATCGAGCGACTGATTAAGCGTGAACAAATTTATCATATCAAGGATTCCGAGAAACGAGTTTTGGCCAGAAAGACTTTGGA
GCGCAAAATTCGATCGCAGGACCTCGCTCGCAAACTCAAAGCCATCATTGTAAAGAAAGTCAGGGGTATGTAAACATCTGACTTTTGCAGTATAGTTGGCATCTTGCTCC
TTTTTCTTTGGATCCCTTCTTTATCTCTGGATTGGCTGCCTCTTAGAAGTGCAATTGAAGCTCCTTATTCAGCGGGATGGCTCCAGTGAGTTTATTTTTTTATCTACGTT
GCTTTCTATCAATTCTGTTTTCTCTTATATTGTGAGCAATTTTTCATGCCTGCTATGGATGCTTCTCAAATCACTGTCTTCCTCTTTGATCACTTTCTACCACCTGCACT
TTTGTTGGATTTCTCTGTAACTTCATATTTTGAAATACTATTAATGATGTAATGGTCCATATAGCTCATGAGCATAATAAAAAGGTTTAAAGAATTGCTCTATTTAATTT
GAGGTAGTTTGTTTGTAAGAAGAAAGGAGACTGAGGGAACAATTAAGACTTAAGTCTATTAATAAGATCGTAAATAGTTGAATGTGAGTTGATAATTTTAGATTACATAC
ACATAAGGAGGGACACATCTAGAATTTGGATTTGAAGAGGTAAGGGAATACAAATAATGAATATGAAGAAGTGTTAGGTCATAAATTGGAGTAGTGGAGAGAGCTAATTA
AATTGAAGAGAGGTGATGATATACATAAAGTTATGGATGATAATGATTTTTTTTTTCTGAAAAAAGGTTAGGGGTATTATTGCAACTTTTAAAAATTTAATTATATTTTT
TAAATGAAGTACTAACCGTTTTTGTCCAAAGTATTAGTTTGTTTTCAACTCTTTTTTTTTTCTTAAGTTAAGGTATTTATGAAATTATTGGAAGTTTATGGGTATTTTTT
ACTAGGAGGTTAAAGCGGGCACTAATTTGGTTATCATGGTTGATGTTAATTGTAGGTTATAATAGTTGGAAACACTACTAGTAAAATTGGTGTCCCATAGCCCACTCTAC
CAACCTTAAGTTGGTGACCTTAACACCGAGGTTATAATGATTTGTGTTTGGGTAGAAAATATTAAACATGGTAATGATAATAAAATTAAAAGAGTAATATGGTAGTTAAT
TGTAATATTAATTTGTTCTTAATTTTTTTTTTCGTTTTAAGTGCATATAAAGTGCTAAGGGTTTTTAGCAAGGGTGTTG
Protein sequenceShow/hide protein sequence
MNSLARNISCSIRSSIHTNCLQHQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIYHIKDSEKRVLARKTLERKIRSQDLARKLKAIIVKKVRGM