; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0026680 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026680
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr09:9054356..9068911
RNA-Seq ExpressionPI0026680
SyntenyPI0026680
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042317.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]3.4e-13759.58Show/hide
Query:  MSFCYADTASIGFVRETLRQFRELSGLIANLEKSSMFVAGVDIEAATVLADSMGMGFALGTFPVRYLHVPLLSGRLRSSDCAPLIQRITSRIRSWSTRVL
        M FC AD  S+ FVRETL++F EL GL ANL K S+FVAG   E A+ LA    MGF LG  PVRYL +PLL+GRLR SDCAPLIQRITSRIRSW+ RVL
Subjt:  MSFCYADTASIGFVRETLRQFRELSGLIANLEKSSMFVAGVDIEAATVLADSMGMGFALGTFPVRYLHVPLLSGRLRSSDCAPLIQRITSRIRSWSTRVL

Query:  SFAGKLQLVRSVLRSFQVFWASVFVLLAEVHHAVDRLLMSYLWRGKE----------------VGRGGAKVAWVDVCRPLEEGGLNIREG-----NLRAI
        SFAG+ QLVRSV RS QV+WASVFVL + VH+ VD++L SYLWR ++                       VAWV+      +    +  G      LRAI
Subjt:  SFAGKLQLVRSVLRSFQVFWASVFVLLAEVHHAVDRLLMSYLWRGKE----------------VGRGGAKVAWVDVCRPLEEGGLNIREG-----NLRAI

Query:  LRHRYIFREHVHMEVGDGRCCRVWLDPWLHGGMIIRQMGELVVYDAASSREARLSEFIDMDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGRQ
        LR R   + HV +EVGDG  CRVWLDPWL G  I+ Q+GE V+YDAAS REARLSEFI  DGEW+WPRVS EL++LW+RVQ VRPCLS+ DRWVWVPG Q
Subjt:  LRHRYIFREHVHMEVGDGRCCRVWLDPWLHGGMIIRQMGELVVYDAASSREARLSEFIDMDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGRQ

Query:  GEFSISSAWKAIRPRSDKVCWAGLLWGGRNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLCQ-GVLNLGIIFFFLSFGYDIWTRIIRDMASSHRV
        G FSI+SA   IRPR  +V W GLLWGG N+P+HSFCAWL I+++LGTRDRL RWDSS+P S +LCQ GV +   +FF   FG D+W+R+++ MASSHR+
Subjt:  GEFSISSAWKAIRPRSDKVCWAGLLWGGRNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLCQ-GVLNLGIIFFFLSFGYDIWTRIIRDMASSHRV

Query:  GGWEVELSWLSRKGIGKGVMRKLWRVLL
          W VELSW+  +GIG  V RKLWRVLL
Subjt:  GGWEVELSWLSRKGIGKGVMRKLWRVLL

KAA0046851.1 uncharacterized protein E6C27_scaffold19358G00020 [Cucumis melo var. makuwa]1.8e-13058.29Show/hide
Query:  MSFCYADTASIGFVRETLRQFRELSGLIANLEKSSMFVAGVDIEAATVLADSMGMGFALGTFPVRYLHVPLLSGRLRSSDCAPLIQRITSRIRSWSTRVL
        M FC AD  SI F+RE L++F E SGL AN  KSS+FV GV+ E A+ LA  +G  +     P            LRS DCAPLIQRITSRIRSW+ RVL
Subjt:  MSFCYADTASIGFVRETLRQFRELSGLIANLEKSSMFVAGVDIEAATVLADSMGMGFALGTFPVRYLHVPLLSGRLRSSDCAPLIQRITSRIRSWSTRVL

Query:  SFAGKLQLVRSVLRSFQVFWASVFVLLAEVHHAVDRLLMSYLWRGKEVGRGGAKVAWVDVCRPLEEGGLNIREG-------NLRAILRH----------R
        SFAG+LQLVRSVLRS QV+WASVFVL A VH+ VD++L SYLWRGKE GRGG KVAWVDVC P EEGGL IR+G        L+ +L +           
Subjt:  SFAGKLQLVRSVLRSFQVFWASVFVLLAEVHHAVDRLLMSYLWRGKEVGRGGAKVAWVDVCRPLEEGGLNIREG-------NLRAILRH----------R

Query:  YIFRE----HVHMEVGDGRCCRVWLDPWLHGGMIIRQMGELVVYDAASSREARLSEFIDMDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGRQ
        YI +      V   VG   C R  L        +   +GE V+YDAAS REA+LS+FID +GEW WPRVS EL++LWERVQ V PCLS+ D WVWVPGRQ
Subjt:  YIFRE----HVHMEVGDGRCCRVWLDPWLHGGMIIRQMGELVVYDAASSREARLSEFIDMDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGRQ

Query:  GEFSISSAWKAIRPRSDKVCWAGLLWGGRNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLCQ-GVLNLGIIFFFLSFGYDIWTRIIRDMASSHRV
        G FSI+SAW+AI PR  +V W GLLWGG NIP+HSFCAWL I+DRL TRDRL RWDSSIP SC+LCQ GV +   +FF   FG D+W+R+ + M SSHR+
Subjt:  GEFSISSAWKAIRPRSDKVCWAGLLWGGRNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLCQ-GVLNLGIIFFFLSFGYDIWTRIIRDMASSHRV

Query:  GGWEVELSWLSRKGIGKGVMRKLWRVL---LVYF
        G W VELSW+  +GIGKGV RKLWRVL    +YF
Subjt:  GGWEVELSWLSRKGIGKGVMRKLWRVL---LVYF

KAA0062318.1 uncharacterized protein E6C27_scaffold154G00690 [Cucumis melo var. makuwa]1.8e-12559.95Show/hide
Query:  MSFCYADTASIGFVRETLRQFRELSGLIANLEKSSMFVAGVDIEAATVLADSMGMGFALGTFPVRYLHVPLLSGRLRSSDCAPLIQRITSRIRSWSTRVL
        M FC A+  SI F+RE L++F ELSGL AN  KSS+FVAGV+ E A+ LA    MGF  G   VRYL +PLL+GRLRS+D APLIQRITSRIRSW+ RVL
Subjt:  MSFCYADTASIGFVRETLRQFRELSGLIANLEKSSMFVAGVDIEAATVLADSMGMGFALGTFPVRYLHVPLLSGRLRSSDCAPLIQRITSRIRSWSTRVL

Query:  SFAGKLQLVRSVLRSFQVFWASVFVLLAEVHHAVDRLLMSYLWRGKEVGRGGAKVAWVDVCRPLEEGGLNIREGN-------------------------
        SFAG+LQLV SVLRSFQV+WASVFVL A VH+ VD++L SYLWRGKE GRGG KVAWVDVC P EEGGL IR+G                          
Subjt:  SFAGKLQLVRSVLRSFQVFWASVFVLLAEVHHAVDRLLMSYLWRGKEVGRGGAKVAWVDVCRPLEEGGLNIREGN-------------------------

Query:  -----------------------LRAILRHRYIFREHVHMEVGDGRCCRVWLDPWLHGGMIIRQMGELVVYDAASSREARLSEFIDMDGEWRWPRVSWEL
                               LRAILR R   +  V M+VG+G   RVWLDPWL  G I+ Q+GE V+YDAAS R+ARLS+FID DGEW WPRVS EL
Subjt:  -----------------------LRAILRHRYIFREHVHMEVGDGRCCRVWLDPWLHGGMIIRQMGELVVYDAASSREARLSEFIDMDGEWRWPRVSWEL

Query:  LELWERVQGVRPCLSIGDRWVWVPGRQGEFSISSAWKAIRPRSDKVCWAGLLWGGRNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLL
        ++LWERVQ V PCLS+ D WVWVPGR+G FSI+SAW+A+RPR  +V W GLLWGG NI +H FCAWL I+DRLGT DRL RWDSS+P  C+L
Subjt:  LELWERVQGVRPCLSIGDRWVWVPGRQGEFSISSAWKAIRPRSDKVCWAGLLWGGRNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLL

TYK12108.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]1.0e-10957.53Show/hide
Query:  MSFCYADTASIGFVRETLRQFRELSGLIANLEKSSMFVAGVDIEAATVLADSMGMGFALGTFPVRYLHVPLLSGRLRSSDCAPLIQRITSRIRSWSTRVL
        M FC AD  SI F+RE L++F ELSGL AN  KS +FVAGV+ E A+ LA    MGF  G  PVRYL +PLL+GRLRS+DCAP+IQRITSRIRSW  RVL
Subjt:  MSFCYADTASIGFVRETLRQFRELSGLIANLEKSSMFVAGVDIEAATVLADSMGMGFALGTFPVRYLHVPLLSGRLRSSDCAPLIQRITSRIRSWSTRVL

Query:  SFAGKLQLVRSVLRSFQVFWASVFVLLAEVHHAVDRLLMSYLWRGKEVGR--GGAKVAWVDVCRPLEEGGLNIREGNLRAILRHRYIFREHVHMEVGDGR
        SFAG+LQLV SVLRS QV+WASVFVL A VH+ VD++L SYLWR           K+ W+          +    G+L       YI +     +V D R
Subjt:  SFAGKLQLVRSVLRSFQVFWASVFVLLAEVHHAVDRLLMSYLWRGKEVGR--GGAKVAWVDVCRPLEEGGLNIREGNLRAILRHRYIFREHVHMEVGDGR

Query:  CCRVWLDPWLHGGMIIRQMGELVVYDAASSREARLSEFIDMDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGRQGEFSISSAWKAIRPRSDKV
          R W    +  G I+ Q+GE V+YDAAS REARLS+FI  +GEW W RV  EL+ LW+RVQ V PCLS+ D WVWVPGRQG FSI+SAWKAIRPR  +V
Subjt:  CCRVWLDPWLHGGMIIRQMGELVVYDAASSREARLSEFIDMDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGRQGEFSISSAWKAIRPRSDKV

Query:  CWAGLLWGGRNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLCQ-GVLNLGIIFFFLSFGYDIWTRII
         W GLLWGGRNIP+HSFCAWL I+DRLGTRDRL RWDSS+P  C+LC+ GV +   +FF   FG D+W+ ++
Subjt:  CWAGLLWGGRNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLCQ-GVLNLGIIFFFLSFGYDIWTRII

XP_031737043.1 uncharacterized protein LOC116402131 [Cucumis sativus]2.1e-13153.96Show/hide
Query:  MSFCYADTASIGFVRETLRQFRELSGLIANLEKSSMFVAGVDIEAATVLADSMGMGFALGTFPVRYLHVPLLSGRLRSSDCAPLIQRITSRIRSWSTRVL
        M FC AD  S+ F++ET+++F ELSGL ANL KSS+F+ GV+   A+ LA    MGF++G  PVRYL +PLL GRL+S DC PLIQRITSRIRSWS RVL
Subjt:  MSFCYADTASIGFVRETLRQFRELSGLIANLEKSSMFVAGVDIEAATVLADSMGMGFALGTFPVRYLHVPLLSGRLRSSDCAPLIQRITSRIRSWSTRVL

Query:  SFAGKLQLVRSVLRSFQVFWASVFVLLAEVHHAVDRLLMSYLWRGKEVGRGGAKVAWVDVCRPLEEGGLNIREG---NLRAILRHRY--------IFREH
        SFAG+LQLVRSVLRS QV+WASVF+L  +VH  VD++L SYLWRGKE GRGGAKVAW +VC P +EGGL IR+G   N+ + L+  +        ++   
Subjt:  SFAGKLQLVRSVLRSFQVFWASVFVLLAEVHHAVDRLLMSYLWRGKEVGRGGAKVAWVDVCRPLEEGGLNIREG---NLRAILRHRY--------IFREH

Query:  VHMEVGDGRCCRVWLD------------------------------PWLHGGMIIRQMGELVVYDAASSREARLSEFIDMDGEWRWPRVSWELLELWERV
        V   +  GR    W+D                               W+ GG II+Q GE V+YDA S R+ARL +F+  DG+WRWP VS +L+++W+ +
Subjt:  VHMEVGDGRCCRVWLD------------------------------PWLHGGMIIRQMGELVVYDAASSREARLSEFIDMDGEWRWPRVSWELLELWERV

Query:  QGVRPCLSIGDRWVWVPGRQGEFSISSAWKAIRPRSDKVCWAGLLWGGRNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLCQG-VLNLGIIFFFL
        QGVRP  S+ DRWVWVPG    FSI+SAW+ IRP S +V W+GLLW   NIP+HSF AWL IRDRLGTRDRLS+WD SIP SC+LC G   +   +FF  
Subjt:  QGVRPCLSIGDRWVWVPGRQGEFSISSAWKAIRPRSDKVCWAGLLWGGRNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLCQG-VLNLGIIFFFL

Query:  SFGYDIWTRIIRDMASSHRVGGWEVELSWLSRKGIGKGVMRKLWRVL---LVYF
         FG++IW+RI+  M+SSHR+G W VELSW+  +GIGKGV RKLW +L    +YF
Subjt:  SFGYDIWTRIIRDMASSHRVGGWEVELSWLSRKGIGKGVMRKLWRVL---LVYF

TrEMBL top hitse value%identityAlignment
A0A5A7TKU4 Non-LTR retroelement reverse transcriptase-like protein1.7e-13759.58Show/hide
Query:  MSFCYADTASIGFVRETLRQFRELSGLIANLEKSSMFVAGVDIEAATVLADSMGMGFALGTFPVRYLHVPLLSGRLRSSDCAPLIQRITSRIRSWSTRVL
        M FC AD  S+ FVRETL++F EL GL ANL K S+FVAG   E A+ LA    MGF LG  PVRYL +PLL+GRLR SDCAPLIQRITSRIRSW+ RVL
Subjt:  MSFCYADTASIGFVRETLRQFRELSGLIANLEKSSMFVAGVDIEAATVLADSMGMGFALGTFPVRYLHVPLLSGRLRSSDCAPLIQRITSRIRSWSTRVL

Query:  SFAGKLQLVRSVLRSFQVFWASVFVLLAEVHHAVDRLLMSYLWRGKE----------------VGRGGAKVAWVDVCRPLEEGGLNIREG-----NLRAI
        SFAG+ QLVRSV RS QV+WASVFVL + VH+ VD++L SYLWR ++                       VAWV+      +    +  G      LRAI
Subjt:  SFAGKLQLVRSVLRSFQVFWASVFVLLAEVHHAVDRLLMSYLWRGKE----------------VGRGGAKVAWVDVCRPLEEGGLNIREG-----NLRAI

Query:  LRHRYIFREHVHMEVGDGRCCRVWLDPWLHGGMIIRQMGELVVYDAASSREARLSEFIDMDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGRQ
        LR R   + HV +EVGDG  CRVWLDPWL G  I+ Q+GE V+YDAAS REARLSEFI  DGEW+WPRVS EL++LW+RVQ VRPCLS+ DRWVWVPG Q
Subjt:  LRHRYIFREHVHMEVGDGRCCRVWLDPWLHGGMIIRQMGELVVYDAASSREARLSEFIDMDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGRQ

Query:  GEFSISSAWKAIRPRSDKVCWAGLLWGGRNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLCQ-GVLNLGIIFFFLSFGYDIWTRIIRDMASSHRV
        G FSI+SA   IRPR  +V W GLLWGG N+P+HSFCAWL I+++LGTRDRL RWDSS+P S +LCQ GV +   +FF   FG D+W+R+++ MASSHR+
Subjt:  GEFSISSAWKAIRPRSDKVCWAGLLWGGRNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLCQ-GVLNLGIIFFFLSFGYDIWTRIIRDMASSHRV

Query:  GGWEVELSWLSRKGIGKGVMRKLWRVLL
          W VELSW+  +GIG  V RKLWRVLL
Subjt:  GGWEVELSWLSRKGIGKGVMRKLWRVLL

A0A5A7TZS0 Reverse transcriptase domain-containing protein8.8e-13158.29Show/hide
Query:  MSFCYADTASIGFVRETLRQFRELSGLIANLEKSSMFVAGVDIEAATVLADSMGMGFALGTFPVRYLHVPLLSGRLRSSDCAPLIQRITSRIRSWSTRVL
        M FC AD  SI F+RE L++F E SGL AN  KSS+FV GV+ E A+ LA  +G  +     P            LRS DCAPLIQRITSRIRSW+ RVL
Subjt:  MSFCYADTASIGFVRETLRQFRELSGLIANLEKSSMFVAGVDIEAATVLADSMGMGFALGTFPVRYLHVPLLSGRLRSSDCAPLIQRITSRIRSWSTRVL

Query:  SFAGKLQLVRSVLRSFQVFWASVFVLLAEVHHAVDRLLMSYLWRGKEVGRGGAKVAWVDVCRPLEEGGLNIREG-------NLRAILRH----------R
        SFAG+LQLVRSVLRS QV+WASVFVL A VH+ VD++L SYLWRGKE GRGG KVAWVDVC P EEGGL IR+G        L+ +L +           
Subjt:  SFAGKLQLVRSVLRSFQVFWASVFVLLAEVHHAVDRLLMSYLWRGKEVGRGGAKVAWVDVCRPLEEGGLNIREG-------NLRAILRH----------R

Query:  YIFRE----HVHMEVGDGRCCRVWLDPWLHGGMIIRQMGELVVYDAASSREARLSEFIDMDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGRQ
        YI +      V   VG   C R  L        +   +GE V+YDAAS REA+LS+FID +GEW WPRVS EL++LWERVQ V PCLS+ D WVWVPGRQ
Subjt:  YIFRE----HVHMEVGDGRCCRVWLDPWLHGGMIIRQMGELVVYDAASSREARLSEFIDMDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGRQ

Query:  GEFSISSAWKAIRPRSDKVCWAGLLWGGRNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLCQ-GVLNLGIIFFFLSFGYDIWTRIIRDMASSHRV
        G FSI+SAW+AI PR  +V W GLLWGG NIP+HSFCAWL I+DRL TRDRL RWDSSIP SC+LCQ GV +   +FF   FG D+W+R+ + M SSHR+
Subjt:  GEFSISSAWKAIRPRSDKVCWAGLLWGGRNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLCQ-GVLNLGIIFFFLSFGYDIWTRIIRDMASSHRV

Query:  GGWEVELSWLSRKGIGKGVMRKLWRVL---LVYF
        G W VELSW+  +GIGKGV RKLWRVL    +YF
Subjt:  GGWEVELSWLSRKGIGKGVMRKLWRVL---LVYF

A0A5A7UP65 Reverse transcriptase5.7e-10652.49Show/hide
Query:  SIGFVRETLRQFRELSGLIANLEKSSMFVAGVDIEAATVLADSMGMGFALGTFPVRYLHVPLLSGRLRSSDCAPLIQRITSRIRSWSTRVLSFAGKLQLV
        S  F     ++F ELSGL AN  KSS+F+AGV+ E A+ LA    MGF  G  PVRYL +PLL+GRLRS+DC PLIQRITSRIRS S RVLSFAG+LQLV
Subjt:  SIGFVRETLRQFRELSGLIANLEKSSMFVAGVDIEAATVLADSMGMGFALGTFPVRYLHVPLLSGRLRSSDCAPLIQRITSRIRSWSTRVLSFAGKLQLV

Query:  RSVLRSFQVFWASVFVLLAEVHHAVDRL------------LMSYLWRGKEVGRGGAKVAWVD--VCRPLEEGGLNIREGN---LRAILRHRYIFREHVHM
         SVL S QV+WA VFVL A VH+    L             +  LW       G   VAWV+  V +      ++ R G    LRAILR +   ++HV M
Subjt:  RSVLRSFQVFWASVFVLLAEVHHAVDRL------------LMSYLWRGKEVGRGGAKVAWVD--VCRPLEEGGLNIREGN---LRAILRHRYIFREHVHM

Query:  EVGDGRCCRVWLDPWLHGGMIIRQMGELVVYDAASSREARLSEFIDMDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGRQGEFSISSAWKAIR
        +VG+G  CRVWLDPWL  G I+ Q+GE V+YDAAS REA LS FI  DGEW WPR                                G FSI+SAW+AIR
Subjt:  EVGDGRCCRVWLDPWLHGGMIIRQMGELVVYDAASSREARLSEFIDMDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGRQGEFSISSAWKAIR

Query:  PRSDKVCWAGLLWGGRNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLCQGVL-NLGIIFFFLSFGYDIWTRIIRDMASSHRVGGWEVELSWLSRK
        PR  +V W GLLWGG NIP+HSFCAWL I+DRLGTRDR  RWDSS+P SC+LC+G + +   +FF   FG D+W+R++R MASSHR+G W VELSW+  +
Subjt:  PRSDKVCWAGLLWGGRNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLCQGVL-NLGIIFFFLSFGYDIWTRIIRDMASSHRVGGWEVELSWLSRK

Query:  GIGKGVMRKLWRVL---LVYF
        GI KGV RKLWRVL    +YF
Subjt:  GIGKGVMRKLWRVL---LVYF

A0A5A7V3Z0 Reverse transcriptase domain-containing protein8.5e-12659.95Show/hide
Query:  MSFCYADTASIGFVRETLRQFRELSGLIANLEKSSMFVAGVDIEAATVLADSMGMGFALGTFPVRYLHVPLLSGRLRSSDCAPLIQRITSRIRSWSTRVL
        M FC A+  SI F+RE L++F ELSGL AN  KSS+FVAGV+ E A+ LA    MGF  G   VRYL +PLL+GRLRS+D APLIQRITSRIRSW+ RVL
Subjt:  MSFCYADTASIGFVRETLRQFRELSGLIANLEKSSMFVAGVDIEAATVLADSMGMGFALGTFPVRYLHVPLLSGRLRSSDCAPLIQRITSRIRSWSTRVL

Query:  SFAGKLQLVRSVLRSFQVFWASVFVLLAEVHHAVDRLLMSYLWRGKEVGRGGAKVAWVDVCRPLEEGGLNIREGN-------------------------
        SFAG+LQLV SVLRSFQV+WASVFVL A VH+ VD++L SYLWRGKE GRGG KVAWVDVC P EEGGL IR+G                          
Subjt:  SFAGKLQLVRSVLRSFQVFWASVFVLLAEVHHAVDRLLMSYLWRGKEVGRGGAKVAWVDVCRPLEEGGLNIREGN-------------------------

Query:  -----------------------LRAILRHRYIFREHVHMEVGDGRCCRVWLDPWLHGGMIIRQMGELVVYDAASSREARLSEFIDMDGEWRWPRVSWEL
                               LRAILR R   +  V M+VG+G   RVWLDPWL  G I+ Q+GE V+YDAAS R+ARLS+FID DGEW WPRVS EL
Subjt:  -----------------------LRAILRHRYIFREHVHMEVGDGRCCRVWLDPWLHGGMIIRQMGELVVYDAASSREARLSEFIDMDGEWRWPRVSWEL

Query:  LELWERVQGVRPCLSIGDRWVWVPGRQGEFSISSAWKAIRPRSDKVCWAGLLWGGRNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLL
        ++LWERVQ V PCLS+ D WVWVPGR+G FSI+SAW+A+RPR  +V W GLLWGG NI +H FCAWL I+DRLGT DRL RWDSS+P  C+L
Subjt:  LELWERVQGVRPCLSIGDRWVWVPGRQGEFSISSAWKAIRPRSDKVCWAGLLWGGRNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLL

A0A5D3CLU1 Non-LTR retroelement reverse transcriptase-like protein5.0e-11057.53Show/hide
Query:  MSFCYADTASIGFVRETLRQFRELSGLIANLEKSSMFVAGVDIEAATVLADSMGMGFALGTFPVRYLHVPLLSGRLRSSDCAPLIQRITSRIRSWSTRVL
        M FC AD  SI F+RE L++F ELSGL AN  KS +FVAGV+ E A+ LA    MGF  G  PVRYL +PLL+GRLRS+DCAP+IQRITSRIRSW  RVL
Subjt:  MSFCYADTASIGFVRETLRQFRELSGLIANLEKSSMFVAGVDIEAATVLADSMGMGFALGTFPVRYLHVPLLSGRLRSSDCAPLIQRITSRIRSWSTRVL

Query:  SFAGKLQLVRSVLRSFQVFWASVFVLLAEVHHAVDRLLMSYLWRGKEVGR--GGAKVAWVDVCRPLEEGGLNIREGNLRAILRHRYIFREHVHMEVGDGR
        SFAG+LQLV SVLRS QV+WASVFVL A VH+ VD++L SYLWR           K+ W+          +    G+L       YI +     +V D R
Subjt:  SFAGKLQLVRSVLRSFQVFWASVFVLLAEVHHAVDRLLMSYLWRGKEVGR--GGAKVAWVDVCRPLEEGGLNIREGNLRAILRHRYIFREHVHMEVGDGR

Query:  CCRVWLDPWLHGGMIIRQMGELVVYDAASSREARLSEFIDMDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGRQGEFSISSAWKAIRPRSDKV
          R W    +  G I+ Q+GE V+YDAAS REARLS+FI  +GEW W RV  EL+ LW+RVQ V PCLS+ D WVWVPGRQG FSI+SAWKAIRPR  +V
Subjt:  CCRVWLDPWLHGGMIIRQMGELVVYDAASSREARLSEFIDMDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGRQGEFSISSAWKAIRPRSDKV

Query:  CWAGLLWGGRNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLCQ-GVLNLGIIFFFLSFGYDIWTRII
         W GLLWGGRNIP+HSFCAWL I+DRLGTRDRL RWDSS+P  C+LC+ GV +   +FF   FG D+W+ ++
Subjt:  CWAGLLWGGRNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLCQ-GVLNLGIIFFFLSFGYDIWTRII

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657504.1e-1622.67Show/hide
Query:  VPLLSGRLRSSDCAPLIQRITSRIRSWSTRVLSFAGKLQLVRSVLRSFQVFWASVFVLLAEVHHAVDRLLMSYLWRGKEVGRGGAKVAWVDVCRPLEEGG
        +P+L  R+       +++R++SR+  W  + LSFAG+L L ++VL S  V   S  +L   + + +D+L  ++LW      +    V W  VC P +EGG
Subjt:  VPLLSGRLRSSDCAPLIQRITSRIRSWSTRVLSFAGKLQLVRSVLRSFQVFWASVFVLLAEVHHAVDRLLMSYLWRGKEVGRGGAKVAWVDVCRPLEEGG

Query:  LNIREGN---------------------LRAILRHRY------------------------------IFREHVHMEVGDGRCCRVWLDPWLHGGMIIRQM
        L +R                           +L+ +Y                              +    V    GDG+  R W D W+ G  ++   
Subjt:  LNIREGN---------------------LRAILRHRY------------------------------IFREHVHMEVGDGRCCRVWLDPWLHGGMIIRQM

Query:  GELVVYDAASSREARLSEFIDMDGE-WRWPRV-----SWELLEL----WERVQGVRPCLSIGDRWVWVPGRQGEFSISSAWKAIR----PRSDKVCWAGL
         EL   +  +  +  +++ + + G  W + ++     +   LEL     + V G R      DR  W   + G+FS+ SA++ +     PR +   +   
Subjt:  GELVVYDAASSREARLSEFIDMDGE-WRWPRV-----SWELLEL----WERVQGVRPCLSIGDRWVWVPGRQGEFSISSAWKAIR----PRSDKVCWAGL

Query:  LWGGRNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLCQG
        LW  R   R     WLV    + T +   R   S    C +C+G
Subjt:  LWGGRNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLCQG

Arabidopsis top hitse value%identityAlignment
AT1G43730.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.6e-1227.33Show/hide
Query:  RAILRHRYIFREHVHMEVGDGRCCRVWLDPWLHGGMIIRQMGELVVYDAASSREARLSEFIDMDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVP
        R + + R + R  V  +VG G   + W D W   G +I  +G L         +A                             G+  C    D ++W  
Subjt:  RAILRHRYIFREHVHMEVGDGRCCRVWLDPWLHGGMIIRQMGELVVYDAASSREARLSEFIDMDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVP

Query:  GRQGEFSISSAWK---AIRPRSDKVCWAGLLWGGRNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLC
              +I S  K   A+ P++  V W   +W   ++P+H+F  W+V  +RL TRDRL  W  SIP  CLLC
Subjt:  GRQGEFSISSAWK---AIRPRSDKVCWAGLLWGGRNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLC

AT1G60720.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.4e-1827.39Show/hide
Query:  RYIFREHVHMEVGDGRCCRVWLDPWLHGGMIIRQMGELVVYDAASSREARLSEFIDMDGEWRWPRVSWELLELWERVQGVRPCLS---------IGDRWV
        R +  + V   +G+GR    W D W   G +I+ MG+           AR+ E + ++G W+ P      L      Q +   +S         I D + 
Subjt:  RYIFREHVHMEVGDGRCCRVWLDPWLHGGMIIRQMGELVVYDAASSREARLSEFIDMDGEWRWPRVSWELLELWERVQGVRPCLS---------IGDRWV

Query:  WVPGR---QGEFSISSAWKAIRPRSDKVCWAGLLWGGRNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLCQ-GVLNLGIIFFFLSFGYDIWTRII
        WV G    QG FS +  W AIRPR+ ++ WA  +W    +P+H+F  W+   DRL TR RL+ W       C LC     +   + F   F   +W    
Subjt:  WVPGR---QGEFSISSAWKAIRPRSDKVCWAGLLWGGRNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLCQ-GVLNLGIIFFFLSFGYDIWTRII

Query:  RDMASSHRV-GGWEVELSWL-SRKGIGKGVMRKLWRVLLVY
          +    R+   W   LSW+ S       ++RK+    ++Y
Subjt:  RDMASSHRV-GGWEVELSWL-SRKGIGKGVMRKLWRVLLVY

AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.0e-4233.13Show/hide
Query:  FALGTFPVRYLHVPLLSGRLRSSDCAPLIQRITSRIRSWSTRVLSFAGKLQLVRSVLRSFQVFWASVFVLLAEVHHAVDRLLMSYLWRGKEVGRGGAKVA
        FA G  PVRYL +PLL+ ++ +SD  PL+++I  RI  W+ R LSFAG+LQL+ SV+ S   FW S F L +     +D +  S+LW G E+    AKVA
Subjt:  FALGTFPVRYLHVPLLSGRLRSSDCAPLIQRITSRIRSWSTRVLSFAGKLQLVRSVLRSFQVFWASVFVLLAEVHHAVDRLLMSYLWRGKEVGRGGAKVA

Query:  WVDVCRPLEEGGLNIR-------------EGNL-------RAILRHRYIFREHVHMEVGDGRCCRVWLDPWLHGGMIIRQMGELVVYDAASSREARLSEF
        W DVC P +EGGL IR              GN        + IL+HR +    V  ++ +G     W D W   G +I   G     D   +  A ++E 
Subjt:  WVDVCRPLEEGGLNIR-------------EGNL-------RAILRHRYIFREHVHMEVGDGRCCRVWLDPWLHGGMIIRQMGELVVYDAASSREARLSEF

Query:  IDMDGEWRWPRVSWELLELWERVQGVR-PCLSIGDRWVWVPGR----QGEFSISSAWKAIRPRSDKVCWAGLLWGGRNIPRHSFCAWLVIRDRLGTRDRL
        +      R    +  LL + + +  VR   L+ G+  V   G     +  F+    W A R    KV W   +W     P++S  AW+ I++RL T DR+
Subjt:  IDMDGEWRWPRVSWELLELWERVQGVR-PCLSIGDRWVWVPGR----QGEFSISSAWKAIRPRSDKVCWAGLLWGGRNIPRHSFCAWLVIRDRLGTRDRL

Query:  SRWDSSIPRSCLLCQGVLNLGIIFFF
          W++    SC+LC  ++      FF
Subjt:  SRWDSSIPRSCLLCQGVLNLGIIFFF

AT4G04650.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.2e-1830.05Show/hide
Query:  RYIFREHVHMEVGDGRCCRVWLDPWLHGGMIIRQMGEL------VVYDAASSREARLSEFIDMDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVW--
        R + R  +  EVG G   + W D W+  G +I  +G L      +  DA      R + +       R P +  +L  L    QG+  C    D ++W  
Subjt:  RYIFREHVHMEVGDGRCCRVWLDPWLHGGMIIRQMGEL------VVYDAASSREARLSEFIDMDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVW--

Query:  -VPGRQGEFSISSAWKAIRPRSDKVCWAGLLWGGRNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLCQG-VLNLGIIFFFLSFGYDIW
         +      FS    W A+ P+S  V W   +W   ++P+H+F  W+V  +RL TRDRL  W  SIP  CLLC     +   +FF   F   +W
Subjt:  -VPGRQGEFSISSAWKAIRPRSDKVCWAGLLWGGRNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLCQG-VLNLGIIFFFLSFGYDIW

AT5G16486.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.4e-1931.05Show/hide
Query:  LNIREGN--LRAILRHRYIFREHVHMEVGDGRCCRVWLDPWLHGGMIIRQMGELVVYDAASSREARLSEFIDMDGEWRWPRVSWELLELWERVQGVRPCL
        +NI  G+   ++I + R + RE V  +VG G  C  W + W + G +I   G+L    +   R A +++ +  DG W W   S     + + ++   P  
Subjt:  LNIREGN--LRAILRHRYIFREHVHMEVGDGRCCRVWLDPWLHGGMIIRQMGELVVYDAASSREARLSEFIDMDGEWRWPRVSWELLELWERVQGVRPCL

Query:  SI--------GDRWVW-VPGRQGEFSISSA--WKAIRPRSDKVCWAGLLWGGRNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLC
        S+         D ++W V G +     SSA  W  + P  +KV W   +W    IP+H+F +W+ IR RL TRD+L  W   +P  CLLC
Subjt:  SI--------GDRWVW-VPGRQGEFSISSA--WKAIRPRSDKVCWAGLLWGGRNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTTTGTTATGCTGACACCGCTTCCATTGGCTTTGTGCGCGAGACTCTTCGTCAGTTTAGGGAGTTATCGGGGTTAATTGCTAATCTGGAGAAGAGCTCTATGTT
TGTGGCGGGGGTTGACATTGAGGCTGCTACTGTGTTGGCGGATAGTATGGGTATGGGGTTTGCGCTGGGTACTTTTCCTGTTCGTTACCTGCATGTTCCCTTACTCTCTG
GTCGTCTGCGTTCTTCGGATTGTGCTCCGCTCATCCAGCGTATTACTAGTCGGATTCGGTCTTGGTCGACTAGAGTATTATCCTTCGCTGGTAAACTTCAGCTTGTGCGT
TCGGTGTTGCGGAGTTTTCAGGTCTTTTGGGCCAGTGTGTTTGTTTTGCTGGCAGAGGTGCATCATGCGGTTGATAGACTTTTGATGTCGTATCTATGGAGGGGTAAGGA
GGTTGGGAGAGGGGGTGCGAAGGTTGCTTGGGTGGATGTGTGTCGCCCGTTAGAGGAAGGGGGTCTAAATATTCGGGAGGGTAATCTTCGTGCTATTCTGAGGCATCGTT
ATATCTTTAGAGAGCATGTCCATATGGAGGTTGGTGATGGTAGGTGTTGTCGTGTGTGGCTTGACCCTTGGCTGCACGGTGGCATGATCATTCGGCAGATGGGTGAGCTG
GTGGTGTATGATGCTGCAAGTAGTAGGGAGGCTAGGCTTTCTGAGTTCATTGACATGGATGGCGAGTGGAGGTGGCCGAGGGTTTCTTGGGAGTTACTTGAGTTGTGGGA
GAGGGTTCAGGGCGTCCGTCCTTGTTTGAGTATTGGGGATCGGTGGGTGTGGGTTCCGGGTCGTCAGGGTGAGTTCTCGATATCGAGTGCGTGGAAGGCTATTCGTCCTA
GGAGTGACAAGGTTTGTTGGGCTGGTCTGTTGTGGGGTGGGAGGAATATTCCTAGACATTCTTTCTGTGCTTGGTTGGTTATTAGGGATAGGTTGGGCACTCGGGATAGG
TTGAGTAGGTGGGATAGTTCGATTCCTCGATCGTGTCTACTTTGCCAGGGGGTGTTGAATCTTGGGATTATCTTTTTTTTCTTGTCCTTTGGGTATGATATCTGGACTCG
TATTATTCGGGATATGGCGTCCTCTCATAGGGTTGGGGGGTGGGAGGTTGAGTTGTCTTGGCTCAGTCGTAAGGGTATTGGGAAGGGTGTGATGAGGAAGCTTTGGCGGG
TGCTCTTGGTGTACTTCTATCTACTTTATCTGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTTTGTTATGCTGACACCGCTTCCATTGGCTTTGTGCGCGAGACTCTTCGTCAGTTTAGGGAGTTATCGGGGTTAATTGCTAATCTGGAGAAGAGCTCTATGTT
TGTGGCGGGGGTTGACATTGAGGCTGCTACTGTGTTGGCGGATAGTATGGGTATGGGGTTTGCGCTGGGTACTTTTCCTGTTCGTTACCTGCATGTTCCCTTACTCTCTG
GTCGTCTGCGTTCTTCGGATTGTGCTCCGCTCATCCAGCGTATTACTAGTCGGATTCGGTCTTGGTCGACTAGAGTATTATCCTTCGCTGGTAAACTTCAGCTTGTGCGT
TCGGTGTTGCGGAGTTTTCAGGTCTTTTGGGCCAGTGTGTTTGTTTTGCTGGCAGAGGTGCATCATGCGGTTGATAGACTTTTGATGTCGTATCTATGGAGGGGTAAGGA
GGTTGGGAGAGGGGGTGCGAAGGTTGCTTGGGTGGATGTGTGTCGCCCGTTAGAGGAAGGGGGTCTAAATATTCGGGAGGGTAATCTTCGTGCTATTCTGAGGCATCGTT
ATATCTTTAGAGAGCATGTCCATATGGAGGTTGGTGATGGTAGGTGTTGTCGTGTGTGGCTTGACCCTTGGCTGCACGGTGGCATGATCATTCGGCAGATGGGTGAGCTG
GTGGTGTATGATGCTGCAAGTAGTAGGGAGGCTAGGCTTTCTGAGTTCATTGACATGGATGGCGAGTGGAGGTGGCCGAGGGTTTCTTGGGAGTTACTTGAGTTGTGGGA
GAGGGTTCAGGGCGTCCGTCCTTGTTTGAGTATTGGGGATCGGTGGGTGTGGGTTCCGGGTCGTCAGGGTGAGTTCTCGATATCGAGTGCGTGGAAGGCTATTCGTCCTA
GGAGTGACAAGGTTTGTTGGGCTGGTCTGTTGTGGGGTGGGAGGAATATTCCTAGACATTCTTTCTGTGCTTGGTTGGTTATTAGGGATAGGTTGGGCACTCGGGATAGG
TTGAGTAGGTGGGATAGTTCGATTCCTCGATCGTGTCTACTTTGCCAGGGGGTGTTGAATCTTGGGATTATCTTTTTTTTCTTGTCCTTTGGGTATGATATCTGGACTCG
TATTATTCGGGATATGGCGTCCTCTCATAGGGTTGGGGGGTGGGAGGTTGAGTTGTCTTGGCTCAGTCGTAAGGGTATTGGGAAGGGTGTGATGAGGAAGCTTTGGCGGG
TGCTCTTGGTGTACTTCTATCTACTTTATCTGGAATGA
Protein sequenceShow/hide protein sequence
MSFCYADTASIGFVRETLRQFRELSGLIANLEKSSMFVAGVDIEAATVLADSMGMGFALGTFPVRYLHVPLLSGRLRSSDCAPLIQRITSRIRSWSTRVLSFAGKLQLVR
SVLRSFQVFWASVFVLLAEVHHAVDRLLMSYLWRGKEVGRGGAKVAWVDVCRPLEEGGLNIREGNLRAILRHRYIFREHVHMEVGDGRCCRVWLDPWLHGGMIIRQMGEL
VVYDAASSREARLSEFIDMDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGRQGEFSISSAWKAIRPRSDKVCWAGLLWGGRNIPRHSFCAWLVIRDRLGTRDR
LSRWDSSIPRSCLLCQGVLNLGIIFFFLSFGYDIWTRIIRDMASSHRVGGWEVELSWLSRKGIGKGVMRKLWRVLLVYFYLLYLE