; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0026701 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026701
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr07:13657862..13658796
RNA-Seq ExpressionPI0026701
SyntenyPI0026701
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060833.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]4.3e-1955.45Show/hide
Query:  MSDGEQPQFELDPEIERTFRRNRRRVRQRQARRMEN--NNRNAPPPQAAPEPKAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFGGNARFEIKPVVLQM
        MS+GEQP+F +D EIER F+RNRR+ ++RQ     N  NN+ AP  QA       Y+AH+ DRPIRS  +PNLY FNPGI YP FG N RF+IKPV+L +
Subjt:  MSDGEQPQFELDPEIERTFRRNRRRVRQRQARRMEN--NNRNAPPPQAAPEPKAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFGGNARFEIKPVVLQM

Query:  I
        +
Subjt:  I

KAA0062403.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]6.6e-1263.49Show/hide
Query:  NNRNAPPPQAAPEPKAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFGGNARFEIKPVVLQMI
        NN+  P  QAA      Y+A D DRPIRSYA+PNLY+FNPGIAYP F  N RFEIK V+LQ+I
Subjt:  NNRNAPPPQAAPEPKAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFGGNARFEIKPVVLQMI

TYK08803.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]4.3e-1955.45Show/hide
Query:  MSDGEQPQFELDPEIERTFRRNRRRVRQRQARRMEN--NNRNAPPPQAAPEPKAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFGGNARFEIKPVVLQM
        MS+GEQP+F +D EIER F+RNRR+ ++RQ     N  NN+ AP  QA       Y+AH+ DRPIRS  +PNLY FNPGI YP FG N RF+IKPV+L +
Subjt:  MSDGEQPQFELDPEIERTFRRNRRRVRQRQARRMEN--NNRNAPPPQAAPEPKAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFGGNARFEIKPVVLQM

Query:  I
        +
Subjt:  I

WP_217833177.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]2.0e-1646.15Show/hide
Query:  FMSDGEQPQFELDPEIERTFRRNRRRVRQRQARRMENNNRNA-----PPPQAAPEPKA------------AYMAHDLDRPIRSYAAPNLYNFNPGIAYPV
        +MS+G+ P F++DPEIERTFRR  R+++QR++ +    N +A       PQA     A              +AHD +RP+R YA+PNLYNF PGI  P 
Subjt:  FMSDGEQPQFELDPEIERTFRRNRRRVRQRQARRMENNNRNA-----PPPQAAPEPKA------------AYMAHDLDRPIRSYAAPNLYNFNPGIAYPV

Query:  FGGNARFEIKPVVLQMI
        F GN RFE+KPV+LQM+
Subjt:  FGGNARFEIKPVVLQMI

XP_038887458.1 uncharacterized protein LOC120077591 [Benincasa hispida]8.6e-1246.15Show/hide
Query:  MSDGEQPQFELDPEIERTF--RRNRRRVRQRQARRMENNNRNAPPPQAA---PEPKAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFGGNARFEIKPVV
        MS    P+FE +PEI+ TF  R ++ R  +R+    +NNN  AP        P     ++A D + PIR+YAAPNLY+F+PGI+ P+   NARFEIKPV+
Subjt:  MSDGEQPQFELDPEIERTF--RRNRRRVRQRQARRMENNNRNAPPPQAA---PEPKAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFGGNARFEIKPVV

Query:  LQMI
        +QMI
Subjt:  LQMI

TrEMBL top hitse value%identityAlignment
A0A5A7UDN8 Uncharacterized protein1.2e-1161.29Show/hide
Query:  NNRNAPPPQAAPEPKAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFGGNARFEIKPVVLQM
        NN+N P  Q   E   AY+AHDLD+PI+SYA+PNLY+FNPGIAY  FG N  FEIK ++L M
Subjt:  NNRNAPPPQAAPEPKAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFGGNARFEIKPVVLQM

A0A5A7UXZ2 Retrovirus-related Pol polyprotein from transposon 17.62.1e-1955.45Show/hide
Query:  MSDGEQPQFELDPEIERTFRRNRRRVRQRQARRMEN--NNRNAPPPQAAPEPKAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFGGNARFEIKPVVLQM
        MS+GEQP+F +D EIER F+RNRR+ ++RQ     N  NN+ AP  QA       Y+AH+ DRPIRS  +PNLY FNPGI YP FG N RF+IKPV+L +
Subjt:  MSDGEQPQFELDPEIERTFRRNRRRVRQRQARRMEN--NNRNAPPPQAAPEPKAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFGGNARFEIKPVVLQM

Query:  I
        +
Subjt:  I

A0A5A7V2U7 Putative disease resistance RPP13-like protein 13.2e-1263.49Show/hide
Query:  NNRNAPPPQAAPEPKAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFGGNARFEIKPVVLQMI
        NN+  P  QAA      Y+A D DRPIRSYA+PNLY+FNPGIAYP F  N RFEIK V+LQ+I
Subjt:  NNRNAPPPQAAPEPKAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFGGNARFEIKPVVLQMI

A0A5D3CAB5 Retrovirus-related Pol polyprotein from transposon 17.62.1e-1955.45Show/hide
Query:  MSDGEQPQFELDPEIERTFRRNRRRVRQRQARRMEN--NNRNAPPPQAAPEPKAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFGGNARFEIKPVVLQM
        MS+GEQP+F +D EIER F+RNRR+ ++RQ     N  NN+ AP  QA       Y+AH+ DRPIRS  +PNLY FNPGI YP FG N RF+IKPV+L +
Subjt:  MSDGEQPQFELDPEIERTFRRNRRRVRQRQARRMEN--NNRNAPPPQAAPEPKAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFGGNARFEIKPVVLQM

Query:  I
        +
Subjt:  I

A0A5D3D4Y1 Uncharacterized protein2.8e-0869.57Show/hide
Query:  AYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFGGNARFEIKPVVLQM
        AY+AHDLDR IRSY + N Y+FNPGIAYPV G + RFEIK V+ QM
Subjt:  AYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFGGNARFEIKPVVLQM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGGCTCCGAAAGAACGCCCAATGAGCCAAACAGCAACCAAAATCCCTGCGTTCGACCCTGGCTTACCCAGGAAACCTCTTGCTTCGCTTATACTTGGGCAAGC
AAGAGGAAAACTTGTACTTAACGAAATATCATTTTTGAATTGTGCGTTCAAACCCGAAGAACACAAGAACAAGTTTATGAGTGACGGTGAACAACCACAATTTGAACTTG
ACCCTGAAATTGAGCGAACCTTTCGACGTAATCGGCGAAGAGTAAGGCAAAGACAAGCAAGGAGAATGGAAAACAATAACAGAAATGCCCCTCCGCCGCAAGCTGCCCCA
GAACCAAAGGCCGCCTATATGGCACATGACTTGGATAGACCGATTAGATCGTATGCGGCACCCAACCTCTACAACTTCAACCCAGGGATCGCTTACCCTGTGTTCGGTGG
AAATGCTAGGTTTGAAATAAAGCCTGTAGTGCTTCAAATGATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAGGCTCCGAAAGAACGCCCAATGAGCCAAACAGCAACCAAAATCCCTGCGTTCGACCCTGGCTTACCCAGGAAACCTCTTGCTTCGCTTATACTTGGGCAAGC
AAGAGGAAAACTTGTACTTAACGAAATATCATTTTTGAATTGTGCGTTCAAACCCGAAGAACACAAGAACAAGTTTATGAGTGACGGTGAACAACCACAATTTGAACTTG
ACCCTGAAATTGAGCGAACCTTTCGACGTAATCGGCGAAGAGTAAGGCAAAGACAAGCAAGGAGAATGGAAAACAATAACAGAAATGCCCCTCCGCCGCAAGCTGCCCCA
GAACCAAAGGCCGCCTATATGGCACATGACTTGGATAGACCGATTAGATCGTATGCGGCACCCAACCTCTACAACTTCAACCCAGGGATCGCTTACCCTGTGTTCGGTGG
AAATGCTAGGTTTGAAATAAAGCCTGTAGTGCTTCAAATGATTTAG
Protein sequenceShow/hide protein sequence
MAKAPKERPMSQTATKIPAFDPGLPRKPLASLILGQARGKLVLNEISFLNCAFKPEEHKNKFMSDGEQPQFELDPEIERTFRRNRRRVRQRQARRMENNNRNAPPPQAAP
EPKAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFGGNARFEIKPVVLQMI