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PI0026710 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026710
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr08:6777224..6777891
RNA-Seq ExpressionPI0026710
SyntenyPI0026710
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045208.1 uncharacterized protein E6C27_scaffold30G002140 [Cucumis melo var. makuwa]8.4e-1151.25Show/hide
Query:  IPPSFEPDCSDEPSIPSHESSVSVPKSPIVPPNKPH----IITTKAGRKKLPPNIPYVPFDGISFHHEENVQKWKYVVQR
        IPP   P   D P  PS E     PK P  P  K       +TTK  RKK+P N+P+VP DGISFHHEE+VQ+WK+V+QR
Subjt:  IPPSFEPDCSDEPSIPSHESSVSVPKSPIVPPNKPH----IITTKAGRKKLPPNIPYVPFDGISFHHEENVQKWKYVVQR

KAA0066406.1 uncharacterized protein E6C27_scaffold21G004820 [Cucumis melo var. makuwa]4.9e-1152.5Show/hide
Query:  IPPSFEPDCSDEPSIPSHESSVSVPKSPIVPPNKP----HIITTKAGRKKLPPNIPYVPFDGISFHHEENVQKWKYVVQR
        IP    P  +D+P  PS E     PK P  P  K       +TTK GRKK+P N+PYVP DGISFHHEE+VQ WK+V+QR
Subjt:  IPPSFEPDCSDEPSIPSHESSVSVPKSPIVPPNKP----HIITTKAGRKKLPPNIPYVPFDGISFHHEENVQKWKYVVQR

KAA0066728.1 uncharacterized protein E6C27_scaffold271G00650 [Cucumis melo var. makuwa]6.4e-1153.25Show/hide
Query:  IPPSFEPDCSDEPSIPSHESSVSVPKSPIVPPNK-PHIITTKAGRKKLPPNIPYVPFDGISFHHEENVQKWKYVVQR
        IPP   P  +++P+ PS E  +  P+ P     +    ITTK GRK+ P NIP VP DGISFHHEENVQ+WKY+VQR
Subjt:  IPPSFEPDCSDEPSIPSHESSVSVPKSPIVPPNK-PHIITTKAGRKKLPPNIPYVPFDGISFHHEENVQKWKYVVQR

TYK00879.1 uncharacterized protein E5676_scaffold602G00380 [Cucumis melo var. makuwa]4.9e-1152.5Show/hide
Query:  IPPSFEPDCSDEPSIPSHESSVSVPKSPIVPPNKP----HIITTKAGRKKLPPNIPYVPFDGISFHHEENVQKWKYVVQR
        IP    P  +D+P  PS E     PK P  P  K       +TTK GRKK+P N+PYVP DGISFHHEE+VQ WK+V+QR
Subjt:  IPPSFEPDCSDEPSIPSHESSVSVPKSPIVPPNKP----HIITTKAGRKKLPPNIPYVPFDGISFHHEENVQKWKYVVQR

TYK27876.1 uncharacterized protein E5676_scaffold384G00590 [Cucumis melo var. makuwa]6.4e-1153.25Show/hide
Query:  IPPSFEPDCSDEPSIPSHESSVSVPKSPIVPPNK-PHIITTKAGRKKLPPNIPYVPFDGISFHHEENVQKWKYVVQR
        IPP   P  +++P+ PS E  +  P+ P     +    ITTK GRK+ P NIP VP DGISFHHEENVQ+WKY+VQR
Subjt:  IPPSFEPDCSDEPSIPSHESSVSVPKSPIVPPNK-PHIITTKAGRKKLPPNIPYVPFDGISFHHEENVQKWKYVVQR

TrEMBL top hitse value%identityAlignment
A0A5A7VG44 Reverse transcriptase Ty1/copia-type domain-containing protein3.1e-1153.25Show/hide
Query:  IPPSFEPDCSDEPSIPSHESSVSVPKSPIVPPNK-PHIITTKAGRKKLPPNIPYVPFDGISFHHEENVQKWKYVVQR
        IPP   P  +++P+ PS E  +  P+ P     +    ITTK GRK+ P NIP VP DGISFHHEENVQ+WKY+VQR
Subjt:  IPPSFEPDCSDEPSIPSHESSVSVPKSPIVPPNK-PHIITTKAGRKKLPPNIPYVPFDGISFHHEENVQKWKYVVQR

A0A5A7VJ79 Uncharacterized protein2.4e-1152.5Show/hide
Query:  IPPSFEPDCSDEPSIPSHESSVSVPKSPIVPPNKP----HIITTKAGRKKLPPNIPYVPFDGISFHHEENVQKWKYVVQR
        IP    P  +D+P  PS E     PK P  P  K       +TTK GRKK+P N+PYVP DGISFHHEE+VQ WK+V+QR
Subjt:  IPPSFEPDCSDEPSIPSHESSVSVPKSPIVPPNKP----HIITTKAGRKKLPPNIPYVPFDGISFHHEENVQKWKYVVQR

A0A5D3BS10 Uncharacterized protein2.4e-1152.5Show/hide
Query:  IPPSFEPDCSDEPSIPSHESSVSVPKSPIVPPNKP----HIITTKAGRKKLPPNIPYVPFDGISFHHEENVQKWKYVVQR
        IP    P  +D+P  PS E     PK P  P  K       +TTK GRKK+P N+PYVP DGISFHHEE+VQ WK+V+QR
Subjt:  IPPSFEPDCSDEPSIPSHESSVSVPKSPIVPPNKP----HIITTKAGRKKLPPNIPYVPFDGISFHHEENVQKWKYVVQR

A0A5D3D6Q4 Uncharacterized protein4.1e-1151.25Show/hide
Query:  IPPSFEPDCSDEPSIPSHESSVSVPKSPIVPPNKPH----IITTKAGRKKLPPNIPYVPFDGISFHHEENVQKWKYVVQR
        IPP   P   D P  PS E     PK P  P  K       +TTK  RKK+P N+P+VP DGISFHHEE+VQ+WK+V+QR
Subjt:  IPPSFEPDCSDEPSIPSHESSVSVPKSPIVPPNKPH----IITTKAGRKKLPPNIPYVPFDGISFHHEENVQKWKYVVQR

A0A5D3DVV8 Reverse transcriptase Ty1/copia-type domain-containing protein3.1e-1153.25Show/hide
Query:  IPPSFEPDCSDEPSIPSHESSVSVPKSPIVPPNK-PHIITTKAGRKKLPPNIPYVPFDGISFHHEENVQKWKYVVQR
        IPP   P  +++P+ PS E  +  P+ P     +    ITTK GRK+ P NIP VP DGISFHHEENVQ+WKY+VQR
Subjt:  IPPSFEPDCSDEPSIPSHESSVSVPKSPIVPPNK-PHIITTKAGRKKLPPNIPYVPFDGISFHHEENVQKWKYVVQR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATGGAGTTCGTTTAAGAGAAGGAGCTCGTTTCAAATGTATTCCAGAATCTCGTCCTTTTGGAAAATCGTCTCTTGCTGAACCTGCTACTTCTGAGCCTATCCAATC
TCATAACTCCCCTCCATCTCAAGATGGGCCATCCTCTCATGTTTCTGAACCTGTGAACTCCTTTGTCCCTCCTACACCTAGTCCTTCTATTCCTCCATCTTTTGAACCTG
ATTGTTCTGATGAACCCTCTATCCCTTCCCATGAGTCGAGTGTTTCCGTTCCTAAATCTCCAATAGTTCCTCCTAATAAACCTCACATTATTACTACCAAAGCTGGAAGG
AAGAAGCTTCCTCCTAATATTCCTTATGTTCCTTTTGACGGAATCTCCTTCCATCATGAAGAGAATGTTCAGAAATGGAAGTATGTTGTTCAAAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCATGGAGTTCGTTTAAGAGAAGGAGCTCGTTTCAAATGTATTCCAGAATCTCGTCCTTTTGGAAAATCGTCTCTTGCTGAACCTGCTACTTCTGAGCCTATCCAATC
TCATAACTCCCCTCCATCTCAAGATGGGCCATCCTCTCATGTTTCTGAACCTGTGAACTCCTTTGTCCCTCCTACACCTAGTCCTTCTATTCCTCCATCTTTTGAACCTG
ATTGTTCTGATGAACCCTCTATCCCTTCCCATGAGTCGAGTGTTTCCGTTCCTAAATCTCCAATAGTTCCTCCTAATAAACCTCACATTATTACTACCAAAGCTGGAAGG
AAGAAGCTTCCTCCTAATATTCCTTATGTTCCTTTTGACGGAATCTCCTTCCATCATGAAGAGAATGTTCAGAAATGGAAGTATGTTGTTCAAAGGTGA
Protein sequenceShow/hide protein sequence
MHGVRLREGARFKCIPESRPFGKSSLAEPATSEPIQSHNSPPSQDGPSSHVSEPVNSFVPPTPSPSIPPSFEPDCSDEPSIPSHESSVSVPKSPIVPPNKPHIITTKAGR
KKLPPNIPYVPFDGISFHHEENVQKWKYVVQR