; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0026715 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026715
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr04:20004233..20004859
RNA-Seq ExpressionPI0026715
SyntenyPI0026715
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031751.1 hypothetical protein E6C27_scaffold506G00140 [Cucumis melo var. makuwa]1.3e-5264.25Show/hide
Query:  MSARSLEPNKHVTLRFKNWWATKHGTYFDDNRHHLVSSVIPPPSQPKLLKNRGSNLGDK---------------------HSDSSRSDRHWKRPSKKAKT
        +  RSLEP KHVT RF +WW TKHGTYF+DNRHHLVSSVIPPPSQP+L KNRGSNLG K                      SDSS+SDRHWKRP KKAK 
Subjt:  MSARSLEPNKHVTLRFKNWWATKHGTYFDDNRHHLVSSVIPPPSQPKLLKNRGSNLGDK---------------------HSDSSRSDRHWKRPSKKAKT

Query:  SGDDSCGGGSSAMEIPNVPTPLSPLDGHLQGLVEICSDDSLIGPHVVDSALEEVDTSKTPVARPVEQSSRPPALREEIR
        SGD   G G SA+E+P+VP PLSPL+ HL+GL+E  SD+SL GPH VDSA EEV TS+TPV +P EQS RP AL EEIR
Subjt:  SGDDSCGGGSSAMEIPNVPTPLSPLDGHLQGLVEICSDDSLIGPHVVDSALEEVDTSKTPVARPVEQSSRPPALREEIR

KAA0041618.1 hypothetical protein E6C27_scaffold93G00910 [Cucumis melo var. makuwa]2.9e-5264.97Show/hide
Query:  MSARSLEPNKHVTLRFKNWWATKHGTYFDDNRHHLVSSVIPPPSQPKLLKNRGSNLGDK-------------------HSDSSRSDRHWKRPSKKAKTSG
        + ARSLEP KHVT RF +WW TKHGTYF+DNRHHLVSSVIPPPSQP+L KNRGSNLG K                    SDSS+SD HWKRP KKAK S 
Subjt:  MSARSLEPNKHVTLRFKNWWATKHGTYFDDNRHHLVSSVIPPPSQPKLLKNRGSNLGDK-------------------HSDSSRSDRHWKRPSKKAKTSG

Query:  DDSCGGGSSAMEIPNVPTPLSPLDGHLQGLVEICSDDSLIGPHVVDSALEEVDTSKTPVARPVEQSSRPPALREEIR
        D   G G SA+E+P+VP PLSPL+ HL+GL+E  SD+SL GPH VDSA EEV TSKTPV +P EQS RP AL EEIR
Subjt:  DDSCGGGSSAMEIPNVPTPLSPLDGHLQGLVEICSDDSLIGPHVVDSALEEVDTSKTPVARPVEQSSRPPALREEIR

KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]1.1e-5163.69Show/hide
Query:  MSARSLEPNKHVTLRFKNWWATKHGTYFDDNRHHLVSSVIPPPSQPKLLKNRGSNLGDK---------------------HSDSSRSDRHWKRPSKKAKT
        + ARSLEP KHVT RF +WW TKHGTYF+DNRHHLVSS IPP SQP+L KNRGSNLG K                      SDSS+SDRHWKRP KKAK 
Subjt:  MSARSLEPNKHVTLRFKNWWATKHGTYFDDNRHHLVSSVIPPPSQPKLLKNRGSNLGDK---------------------HSDSSRSDRHWKRPSKKAKT

Query:  SGDDSCGGGSSAMEIPNVPTPLSPLDGHLQGLVEICSDDSLIGPHVVDSALEEVDTSKTPVARPVEQSSRPPALREEIR
        SGD   G G SA+E+P+VP PLSPL+ HL+GL+E  SD+SL GPH VDSA EEV TS+TPV +P EQS RP AL EEIR
Subjt:  SGDDSCGGGSSAMEIPNVPTPLSPLDGHLQGLVEICSDDSLIGPHVVDSALEEVDTSKTPVARPVEQSSRPPALREEIR

KAA0048379.1 hypothetical protein E6C27_scaffold264G00980 [Cucumis melo var. makuwa]3.5e-5062.57Show/hide
Query:  MSARSLEPNKHVTLRFKNWWATKHGTYFDDNRHHLVSSVIPPPSQPKLLKNRGSNLGDK---------------------HSDSSRSDRHWKRPSKKAKT
        + AR LEP KHVT RF +WW TKHGTYF+DNRHHLVSS IPPPSQP+L KNRGSNLG K                      SDSS+SDRHWKR  KKAK 
Subjt:  MSARSLEPNKHVTLRFKNWWATKHGTYFDDNRHHLVSSVIPPPSQPKLLKNRGSNLGDK---------------------HSDSSRSDRHWKRPSKKAKT

Query:  SGDDSCGGGSSAMEIPNVPTPLSPLDGHLQGLVEICSDDSLIGPHVVDSALEEVDTSKTPVARPVEQSSRPPALREEIR
        S D   G G SA+E+P+VP PLSPL+ HL+GL+E  SD+SL GPH VDSA EEV TSKTPV +P EQS RP AL E+IR
Subjt:  SGDDSCGGGSSAMEIPNVPTPLSPLDGHLQGLVEICSDDSLIGPHVVDSALEEVDTSKTPVARPVEQSSRPPALREEIR

TYK19639.1 hypothetical protein E5676_scaffold242G00260 [Cucumis melo var. makuwa]4.4e-5365.54Show/hide
Query:  MSARSLEPNKHVTLRFKNWWATKHGTYFDDNRHHLVSSVIPPPSQPKLLKNRGSNLGDK-------------------HSDSSRSDRHWKRPSKKAKTSG
        + ARSLEP KHVT RF +WW TKHGTYF+DNRHHLVSSVIPPPSQP+L KNRGSNLG K                    SDSS+SD HWKRP KKAK SG
Subjt:  MSARSLEPNKHVTLRFKNWWATKHGTYFDDNRHHLVSSVIPPPSQPKLLKNRGSNLGDK-------------------HSDSSRSDRHWKRPSKKAKTSG

Query:  DDSCGGGSSAMEIPNVPTPLSPLDGHLQGLVEICSDDSLIGPHVVDSALEEVDTSKTPVARPVEQSSRPPALREEIR
        D   G G SA+E+P+VP PLSPL+ HL+GL+E  SD+SL GPH VDSA EEV TSKTPV +P EQS RP AL EEIR
Subjt:  DDSCGGGSSAMEIPNVPTPLSPLDGHLQGLVEICSDDSLIGPHVVDSALEEVDTSKTPVARPVEQSSRPPALREEIR

TrEMBL top hitse value%identityAlignment
A0A5A7SQC9 PMD domain-containing protein6.3e-5364.25Show/hide
Query:  MSARSLEPNKHVTLRFKNWWATKHGTYFDDNRHHLVSSVIPPPSQPKLLKNRGSNLGDK---------------------HSDSSRSDRHWKRPSKKAKT
        +  RSLEP KHVT RF +WW TKHGTYF+DNRHHLVSSVIPPPSQP+L KNRGSNLG K                      SDSS+SDRHWKRP KKAK 
Subjt:  MSARSLEPNKHVTLRFKNWWATKHGTYFDDNRHHLVSSVIPPPSQPKLLKNRGSNLGDK---------------------HSDSSRSDRHWKRPSKKAKT

Query:  SGDDSCGGGSSAMEIPNVPTPLSPLDGHLQGLVEICSDDSLIGPHVVDSALEEVDTSKTPVARPVEQSSRPPALREEIR
        SGD   G G SA+E+P+VP PLSPL+ HL+GL+E  SD+SL GPH VDSA EEV TS+TPV +P EQS RP AL EEIR
Subjt:  SGDDSCGGGSSAMEIPNVPTPLSPLDGHLQGLVEICSDDSLIGPHVVDSALEEVDTSKTPVARPVEQSSRPPALREEIR

A0A5A7TFC8 PMD domain-containing protein1.4e-5264.97Show/hide
Query:  MSARSLEPNKHVTLRFKNWWATKHGTYFDDNRHHLVSSVIPPPSQPKLLKNRGSNLGDK-------------------HSDSSRSDRHWKRPSKKAKTSG
        + ARSLEP KHVT RF +WW TKHGTYF+DNRHHLVSSVIPPPSQP+L KNRGSNLG K                    SDSS+SD HWKRP KKAK S 
Subjt:  MSARSLEPNKHVTLRFKNWWATKHGTYFDDNRHHLVSSVIPPPSQPKLLKNRGSNLGDK-------------------HSDSSRSDRHWKRPSKKAKTSG

Query:  DDSCGGGSSAMEIPNVPTPLSPLDGHLQGLVEICSDDSLIGPHVVDSALEEVDTSKTPVARPVEQSSRPPALREEIR
        D   G G SA+E+P+VP PLSPL+ HL+GL+E  SD+SL GPH VDSA EEV TSKTPV +P EQS RP AL EEIR
Subjt:  DDSCGGGSSAMEIPNVPTPLSPLDGHLQGLVEICSDDSLIGPHVVDSALEEVDTSKTPVARPVEQSSRPPALREEIR

A0A5A7TX42 Uncharacterized protein5.3e-5263.69Show/hide
Query:  MSARSLEPNKHVTLRFKNWWATKHGTYFDDNRHHLVSSVIPPPSQPKLLKNRGSNLGDK---------------------HSDSSRSDRHWKRPSKKAKT
        + ARSLEP KHVT RF +WW TKHGTYF+DNRHHLVSS IPP SQP+L KNRGSNLG K                      SDSS+SDRHWKRP KKAK 
Subjt:  MSARSLEPNKHVTLRFKNWWATKHGTYFDDNRHHLVSSVIPPPSQPKLLKNRGSNLGDK---------------------HSDSSRSDRHWKRPSKKAKT

Query:  SGDDSCGGGSSAMEIPNVPTPLSPLDGHLQGLVEICSDDSLIGPHVVDSALEEVDTSKTPVARPVEQSSRPPALREEIR
        SGD   G G SA+E+P+VP PLSPL+ HL+GL+E  SD+SL GPH VDSA EEV TS+TPV +P EQS RP AL EEIR
Subjt:  SGDDSCGGGSSAMEIPNVPTPLSPLDGHLQGLVEICSDDSLIGPHVVDSALEEVDTSKTPVARPVEQSSRPPALREEIR

A0A5A7U4K9 Uncharacterized protein1.7e-5062.57Show/hide
Query:  MSARSLEPNKHVTLRFKNWWATKHGTYFDDNRHHLVSSVIPPPSQPKLLKNRGSNLGDK---------------------HSDSSRSDRHWKRPSKKAKT
        + AR LEP KHVT RF +WW TKHGTYF+DNRHHLVSS IPPPSQP+L KNRGSNLG K                      SDSS+SDRHWKR  KKAK 
Subjt:  MSARSLEPNKHVTLRFKNWWATKHGTYFDDNRHHLVSSVIPPPSQPKLLKNRGSNLGDK---------------------HSDSSRSDRHWKRPSKKAKT

Query:  SGDDSCGGGSSAMEIPNVPTPLSPLDGHLQGLVEICSDDSLIGPHVVDSALEEVDTSKTPVARPVEQSSRPPALREEIR
        S D   G G SA+E+P+VP PLSPL+ HL+GL+E  SD+SL GPH VDSA EEV TSKTPV +P EQS RP AL E+IR
Subjt:  SGDDSCGGGSSAMEIPNVPTPLSPLDGHLQGLVEICSDDSLIGPHVVDSALEEVDTSKTPVARPVEQSSRPPALREEIR

A0A5D3D7V4 PMD domain-containing protein2.1e-5365.54Show/hide
Query:  MSARSLEPNKHVTLRFKNWWATKHGTYFDDNRHHLVSSVIPPPSQPKLLKNRGSNLGDK-------------------HSDSSRSDRHWKRPSKKAKTSG
        + ARSLEP KHVT RF +WW TKHGTYF+DNRHHLVSSVIPPPSQP+L KNRGSNLG K                    SDSS+SD HWKRP KKAK SG
Subjt:  MSARSLEPNKHVTLRFKNWWATKHGTYFDDNRHHLVSSVIPPPSQPKLLKNRGSNLGDK-------------------HSDSSRSDRHWKRPSKKAKTSG

Query:  DDSCGGGSSAMEIPNVPTPLSPLDGHLQGLVEICSDDSLIGPHVVDSALEEVDTSKTPVARPVEQSSRPPALREEIR
        D   G G SA+E+P+VP PLSPL+ HL+GL+E  SD+SL GPH VDSA EEV TSKTPV +P EQS RP AL EEIR
Subjt:  DDSCGGGSSAMEIPNVPTPLSPLDGHLQGLVEICSDDSLIGPHVVDSALEEVDTSKTPVARPVEQSSRPPALREEIR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGCCCGTTCGTTAGAGCCTAACAAGCATGTGACATTGCGGTTCAAAAATTGGTGGGCCACGAAACATGGGACCTATTTTGATGATAATAGACACCATTTGGTGAG
CAGTGTCATTCCTCCCCCATCACAACCCAAACTACTCAAAAACCGAGGAAGCAATCTGGGCGACAAACATAGTGATAGCAGCAGAAGCGATCGTCATTGGAAGAGACCTT
CGAAGAAAGCAAAGACATCAGGTGATGATTCTTGTGGAGGAGGTTCAAGTGCTATGGAAATTCCAAATGTGCCAACACCACTATCACCTTTGGACGGTCATCTTCAAGGA
CTTGTAGAGATATGTAGTGATGACTCTCTAATAGGGCCTCATGTCGTGGATTCAGCCCTTGAAGAAGTTGATACCTCAAAGACACCAGTTGCTAGACCAGTTGAACAATC
CTCACGTCCTCCTGCTCTTCGCGAGGAGATTCGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTGCCCGTTCGTTAGAGCCTAACAAGCATGTGACATTGCGGTTCAAAAATTGGTGGGCCACGAAACATGGGACCTATTTTGATGATAATAGACACCATTTGGTGAG
CAGTGTCATTCCTCCCCCATCACAACCCAAACTACTCAAAAACCGAGGAAGCAATCTGGGCGACAAACATAGTGATAGCAGCAGAAGCGATCGTCATTGGAAGAGACCTT
CGAAGAAAGCAAAGACATCAGGTGATGATTCTTGTGGAGGAGGTTCAAGTGCTATGGAAATTCCAAATGTGCCAACACCACTATCACCTTTGGACGGTCATCTTCAAGGA
CTTGTAGAGATATGTAGTGATGACTCTCTAATAGGGCCTCATGTCGTGGATTCAGCCCTTGAAGAAGTTGATACCTCAAAGACACCAGTTGCTAGACCAGTTGAACAATC
CTCACGTCCTCCTGCTCTTCGCGAGGAGATTCGTTAG
Protein sequenceShow/hide protein sequence
MSARSLEPNKHVTLRFKNWWATKHGTYFDDNRHHLVSSVIPPPSQPKLLKNRGSNLGDKHSDSSRSDRHWKRPSKKAKTSGDDSCGGGSSAMEIPNVPTPLSPLDGHLQG
LVEICSDDSLIGPHVVDSALEEVDTSKTPVARPVEQSSRPPALREEIR