; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0026760 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026760
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRNA polymerase II elongation factor
Genome locationchr06:26949600..26950894
RNA-Seq ExpressionPI0026760
SyntenyPI0026760
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015562.1 hypothetical protein SDJN02_23198, partial [Cucurbita argyrosperma subsp. argyrosperma]3.5e-9383.26Show/hide
Query:  ETKYS-SAAHIVEIPVEQENHTHNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFSLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDP
        ETK S +AAH+VEIP E +    N+MISVI+ HPLRQISESSGHLLLLKLWQR+EHLF LRIGRRETK+ESLKQQIFQLCC+FFLFHALSLTLL+TSSDP
Subjt:  ETKYS-SAAHIVEIPVEQENHTHNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFSLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDP

Query:  IVCKKWWVAAVVMGATSGVFVILVQLKLWMYWKARGQLQREKSENRALTRCVQELRMKGSCFNLCKEPQIGNRMKSSSVEIKWGPLTWFSRNFITISLLG
         VC KWWV  V MGATSGVFVI+VQLKLW+YWKA  QLQREKSENRALTRCVQELRMKGSCFNL KEPQIG+RMKSSSVEIKWGPLTW SRNF+TI LL 
Subjt:  IVCKKWWVAAVVMGATSGVFVILVQLKLWMYWKARGQLQREKSENRALTRCVQELRMKGSCFNLCKEPQIGNRMKSSSVEIKWGPLTWFSRNFITISLLG

Query:  FSAIVFAASKFILCG
        FS IVF ASKFILCG
Subjt:  FSAIVFAASKFILCG

XP_004149573.1 uncharacterized protein LOC101219596 [Cucumis sativus]1.1e-11094.01Show/hide
Query:  MAETKYSSAAHIVEIPVEQENHTHNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFSLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSD
        MAETK S+AAHIVEIPVEQENHT NLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLF LRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSD
Subjt:  MAETKYSSAAHIVEIPVEQENHTHNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFSLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSD

Query:  PIVCKKWWVAAVVMGATSGVFVILVQLKLWMYWKARGQLQREKSENRALTRCVQELRMKGSCFNLCKEPQIGNRMKSSSVEIKWGPLTWFSRNFITISLL
        PIVCKKWWV AVV+GATSGVFVI+VQLKLWMYWKARGQLQ+EK+ENRALTRCVQELRMKGSCFNL KEPQIGNRMKSSSVEIKWGPLTWFSRNFITISLL
Subjt:  PIVCKKWWVAAVVMGATSGVFVILVQLKLWMYWKARGQLQREKSENRALTRCVQELRMKGSCFNLCKEPQIGNRMKSSSVEIKWGPLTWFSRNFITISLL

Query:  GFSAIVFAASKFILCGF
        GFSAI+F  SKFILCGF
Subjt:  GFSAIVFAASKFILCGF

XP_008449068.1 PREDICTED: uncharacterized protein LOC103491049 [Cucumis melo]4.9e-11194.93Show/hide
Query:  MAETKYSSAAHIVEIPVEQENHTHNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFSLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSD
        MA+TK S+AAHIVEIPVEQENHT NLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLF LRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSD
Subjt:  MAETKYSSAAHIVEIPVEQENHTHNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFSLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSD

Query:  PIVCKKWWVAAVVMGATSGVFVILVQLKLWMYWKARGQLQREKSENRALTRCVQELRMKGSCFNLCKEPQIGNRMKSSSVEIKWGPLTWFSRNFITISLL
        PIVCKKWWV AVV+GATSGVFVI+VQLKLWMYWKARGQLQREKSENRALTRC QELRMKGSCFNL KEPQIGNRMKSSSVEIKWGPLTWFSRNFI ISLL
Subjt:  PIVCKKWWVAAVVMGATSGVFVILVQLKLWMYWKARGQLQREKSENRALTRCVQELRMKGSCFNLCKEPQIGNRMKSSSVEIKWGPLTWFSRNFITISLL

Query:  GFSAIVFAASKFILCGF
        GFSAIVFAASKFILCGF
Subjt:  GFSAIVFAASKFILCGF

XP_023553388.1 uncharacterized protein LOC111810817 [Cucurbita pepo subsp. pepo]2.4e-9483.18Show/hide
Query:  ETKYSSAAHIVEIPVEQENHTHNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFSLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPI
        ET+ S AAH+VEIP E +    N+MISVI+ HPLRQISESSGHLLLLKLWQR+EHLF LR+GRRETKMESLKQQIFQLCC+FFLFHALSLTLL+TSSDP 
Subjt:  ETKYSSAAHIVEIPVEQENHTHNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFSLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPI

Query:  VCKKWWVAAVVMGATSGVFVILVQLKLWMYWKARGQLQREKSENRALTRCVQELRMKGSCFNLCKEPQIGNRMKSSSVEIKWGPLTWFSRNFITISLLGF
        VC KWWV  V MGATSGVFVI+VQLKLW+YWKA  QLQREKSENRALTRCVQELRMKGSCFNL KEPQIG+RMKSSSVEIKWGPLTW SRNF+TI LL F
Subjt:  VCKKWWVAAVVMGATSGVFVILVQLKLWMYWKARGQLQREKSENRALTRCVQELRMKGSCFNLCKEPQIGNRMKSSSVEIKWGPLTWFSRNFITISLLGF

Query:  SAIVFAASKFILCG
        S IVF ASKFILCG
Subjt:  SAIVFAASKFILCG

XP_038905570.1 uncharacterized protein LOC120091553 [Benincasa hispida]5.3e-10591.78Show/hide
Query:  MAETKYSSAAHIVEIPVEQENHTHNL--MISVIQHHPLRQISESSGHLLLLKLWQRDEHLFSLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTS
        MAETK  S AHIVEIPVEQENHT N   MISVIQHHPLRQISESSGHLLLLKLWQRDEHLF LRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTS
Subjt:  MAETKYSSAAHIVEIPVEQENHTHNL--MISVIQHHPLRQISESSGHLLLLKLWQRDEHLFSLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTS

Query:  SDPIVCKKWWVAAVVMGATSGVFVILVQLKLWMYWKARGQLQREKSENRALTRCVQELRMKGSCFNLCKEPQIGNRMKSSSVEIKWGPLTWFSRNFITIS
        SDP VCKKWWV AV MGATSGVFVI+VQLKLW+YWKA GQLQREK+ENRALTRCVQELRMKGSCFNL KEPQIGNRMKSSSVEIKWGPLTWFSRNFITI 
Subjt:  SDPIVCKKWWVAAVVMGATSGVFVILVQLKLWMYWKARGQLQREKSENRALTRCVQELRMKGSCFNLCKEPQIGNRMKSSSVEIKWGPLTWFSRNFITIS

Query:  LLGFSAIVFAASKFILCGF
        LLGFSAIVFAASKFILC F
Subjt:  LLGFSAIVFAASKFILCGF

TrEMBL top hitse value%identityAlignment
A0A0A0L2U7 Uncharacterized protein5.3e-11194.01Show/hide
Query:  MAETKYSSAAHIVEIPVEQENHTHNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFSLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSD
        MAETK S+AAHIVEIPVEQENHT NLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLF LRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSD
Subjt:  MAETKYSSAAHIVEIPVEQENHTHNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFSLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSD

Query:  PIVCKKWWVAAVVMGATSGVFVILVQLKLWMYWKARGQLQREKSENRALTRCVQELRMKGSCFNLCKEPQIGNRMKSSSVEIKWGPLTWFSRNFITISLL
        PIVCKKWWV AVV+GATSGVFVI+VQLKLWMYWKARGQLQ+EK+ENRALTRCVQELRMKGSCFNL KEPQIGNRMKSSSVEIKWGPLTWFSRNFITISLL
Subjt:  PIVCKKWWVAAVVMGATSGVFVILVQLKLWMYWKARGQLQREKSENRALTRCVQELRMKGSCFNLCKEPQIGNRMKSSSVEIKWGPLTWFSRNFITISLL

Query:  GFSAIVFAASKFILCGF
        GFSAI+F  SKFILCGF
Subjt:  GFSAIVFAASKFILCGF

A0A1S3BL81 uncharacterized protein LOC1034910492.4e-11194.93Show/hide
Query:  MAETKYSSAAHIVEIPVEQENHTHNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFSLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSD
        MA+TK S+AAHIVEIPVEQENHT NLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLF LRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSD
Subjt:  MAETKYSSAAHIVEIPVEQENHTHNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFSLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSD

Query:  PIVCKKWWVAAVVMGATSGVFVILVQLKLWMYWKARGQLQREKSENRALTRCVQELRMKGSCFNLCKEPQIGNRMKSSSVEIKWGPLTWFSRNFITISLL
        PIVCKKWWV AVV+GATSGVFVI+VQLKLWMYWKARGQLQREKSENRALTRC QELRMKGSCFNL KEPQIGNRMKSSSVEIKWGPLTWFSRNFI ISLL
Subjt:  PIVCKKWWVAAVVMGATSGVFVILVQLKLWMYWKARGQLQREKSENRALTRCVQELRMKGSCFNLCKEPQIGNRMKSSSVEIKWGPLTWFSRNFITISLL

Query:  GFSAIVFAASKFILCGF
        GFSAIVFAASKFILCGF
Subjt:  GFSAIVFAASKFILCGF

A0A5A7VJ68 Uncharacterized protein1.4e-7496.62Show/hide
Query:  MESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVAAVVMGATSGVFVILVQLKLWMYWKARGQLQREKSENRALTRCVQELRMKGSCFNLCKEP
        MESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWV AVV+GATSGVFVI+VQLKLWMYWKARGQLQREKSENRALTRCVQELRMKGSCFNL KEP
Subjt:  MESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVAAVVMGATSGVFVILVQLKLWMYWKARGQLQREKSENRALTRCVQELRMKGSCFNLCKEP

Query:  QIGNRMKSSSVEIKWGPLTWFSRNFITISLLGFSAIVFAASKFILCGF
        QIGNRMKSSSVEIKWGPLTWFSRNFI ISLLGFSAIVFAASKFILCGF
Subjt:  QIGNRMKSSSVEIKWGPLTWFSRNFITISLLGFSAIVFAASKFILCGF

A0A6J1EWB5 uncharacterized protein LOC1114387095.5e-9282.79Show/hide
Query:  ETKYS-SAAHIVEIPVEQENHTHNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFSLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDP
        ETK S +AAH+VEIP E +    N+MISVI+ HPLRQISESSGHLLLLKLWQR+EHLF LRIGRRETK+ESLKQQIFQLCC+FFLFHALSLTLL+TSSDP
Subjt:  ETKYS-SAAHIVEIPVEQENHTHNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFSLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDP

Query:  IVCKKWWVAAVVMGATSGVFVILVQLKLWMYWKARGQLQREKSENRALTRCVQELRMKGSCFNLCKEPQIGNRMKSSSVEIKWGPLTWFSRNFITISLLG
         VC KWWV  V MGATSGVFVI+VQLKLW+YWKA  QLQREKSENRALTRCVQELRMKGSCFNL KEPQIG+RMKSSSVEIKWGPLT  SRNF+TI LL 
Subjt:  IVCKKWWVAAVVMGATSGVFVILVQLKLWMYWKARGQLQREKSENRALTRCVQELRMKGSCFNLCKEPQIGNRMKSSSVEIKWGPLTWFSRNFITISLLG

Query:  FSAIVFAASKFILCG
        FS IVF ASKFILCG
Subjt:  FSAIVFAASKFILCG

A0A6J1HN07 uncharacterized protein LOC1114651141.9e-9283.26Show/hide
Query:  ETKYSSAA-HIVEIPVEQENHTHNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFSLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDP
        ETK S AA HIVEIP E +    N+MISVI+ HPLRQISESSGHLLLLKLWQR+EHLF LRIGRRETK+ESLKQQIFQLCC+FFLFHALSLTLL+TSSDP
Subjt:  ETKYSSAA-HIVEIPVEQENHTHNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFSLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDP

Query:  IVCKKWWVAAVVMGATSGVFVILVQLKLWMYWKARGQLQREKSENRALTRCVQELRMKGSCFNLCKEPQIGNRMKSSSVEIKWGPLTWFSRNFITISLLG
         VC KWWV  V MGATSGVFVI+VQLKLW+YWKA  QLQREKSENRALTR VQELRMKGSCFNL KEPQIG+RMKSSSVEIKWGPLTW SRNF+TI LL 
Subjt:  IVCKKWWVAAVVMGATSGVFVILVQLKLWMYWKARGQLQREKSENRALTRCVQELRMKGSCFNLCKEPQIGNRMKSSSVEIKWGPLTWFSRNFITISLLG

Query:  FSAIVFAASKFILCG
        FS IVF ASKFILCG
Subjt:  FSAIVFAASKFILCG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G12870.1 unknown protein1.3e-2435.79Show/hide
Query:  HPLRQISESSGHLLLLKLWQRDEHLFSLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLY-------TSSDPIVCKKWWVAAVVMGATSGVFVILVQ
        HPL QI+++  H LLLK W ++E L   R+  +E++++S++++I QL  FFFLFH++SL LL+       +S+    CK+ W+ ++    +S   +  V+
Subjt:  HPLRQISESSGHLLLLKLWQRDEHLFSLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLY-------TSSDPIVCKKWWVAAVVMGATSGVFVILVQ

Query:  LKLWMYWKARGQLQREKSENRALTRCVQELRMKGSCFNLCKEPQIGNRMKSSSVEIKWGPL-TWFSRNFITISLLGFSAIVFAASKFILC
         K  +       L+REK + + L +CV+EL+ KG  F+L KE     R KS  VE K  P+  W +R+F+T+     S +V A  + ILC
Subjt:  LKLWMYWKARGQLQREKSENRALTRCVQELRMKGSCFNLCKEPQIGNRMKSSSVEIKWGPL-TWFSRNFITISLLGFSAIVFAASKFILC

AT5G56120.1 unknown protein8.5e-6153.14Show/hide
Query:  MAETKYSSAAHIVEIPVEQENHTHNL-------------MISVIQHHPLRQISESSGHLLLLKLWQRDEHLFSLRIGRRETKMESLKQQIFQLCCFFFLF
        MA TK S   H+VEIPV++E+                  ++ VIQ HPL +ISES GHLLLLKLWQR+E LF  R+  +E+++ES+K++IFQLCCFF +F
Subjt:  MAETKYSSAAHIVEIPVEQENHTHNL-------------MISVIQHHPLRQISESSGHLLLLKLWQRDEHLFSLRIGRRETKMESLKQQIFQLCCFFFLF

Query:  HALSLTLLYTSS---------DPIVCKKWWVAAVVMGATSGVFVILVQLKLWMYWKARGQLQREKSENRALTRCVQELRMKGSCFNLCKEPQIGNRMKSS
        H    TL+Y+SS            VCKKWW+ + V  ATS V V LVQ KL+++WK    + RE+++NR LTRCV ELRMKGS F+L KEP  G RMKSS
Subjt:  HALSLTLLYTSS---------DPIVCKKWWVAAVVMGATSGVFVILVQLKLWMYWKARGQLQREKSENRALTRCVQELRMKGSCFNLCKEPQIGNRMKSS

Query:  SVEIKWGPLTWFSRNFITISLLGFSAIVFAASKFILCGF
        SVEIKW P+TWFS+  ITI LL  + + F  SKFILCGF
Subjt:  SVEIKWGPLTWFSRNFITISLLGFSAIVFAASKFILCGF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAAACCAAATATTCAAGCGCTGCCCACATAGTTGAAATCCCAGTAGAACAAGAAAACCACACTCACAACCTCATGATCTCTGTAATTCAACACCACCCATTGCG
ACAAATTTCCGAAAGCTCTGGCCATTTATTACTCTTAAAGCTTTGGCAACGAGACGAGCATCTCTTCAGTCTCAGAATAGGACGTCGAGAGACAAAAATGGAGTCTTTAA
AGCAACAAATCTTTCAACTCTGTTGCTTCTTCTTCCTCTTCCATGCCCTCTCTCTCACTCTCTTGTACACTTCCTCTGATCCCATTGTGTGTAAGAAATGGTGGGTTGCG
GCGGTGGTGATGGGGGCAACGTCAGGGGTGTTCGTGATCTTGGTGCAGCTGAAATTGTGGATGTATTGGAAAGCAAGAGGGCAGTTACAGAGGGAGAAGAGTGAAAACAG
AGCACTTACAAGATGTGTTCAAGAACTTAGAATGAAAGGATCTTGCTTTAATTTGTGTAAAGAACCACAAATTGGGAATAGAATGAAGAGTTCTAGTGTGGAGATTAAAT
GGGGGCCTCTCACTTGGTTTTCAAGGAATTTCATTACCATTTCTCTTCTTGGCTTTTCTGCCATTGTCTTTGCTGCTTCCAAGTTCATTCTTTGCGGCTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAAACCAAATATTCAAGCGCTGCCCACATAGTTGAAATCCCAGTAGAACAAGAAAACCACACTCACAACCTCATGATCTCTGTAATTCAACACCACCCATTGCG
ACAAATTTCCGAAAGCTCTGGCCATTTATTACTCTTAAAGCTTTGGCAACGAGACGAGCATCTCTTCAGTCTCAGAATAGGACGTCGAGAGACAAAAATGGAGTCTTTAA
AGCAACAAATCTTTCAACTCTGTTGCTTCTTCTTCCTCTTCCATGCCCTCTCTCTCACTCTCTTGTACACTTCCTCTGATCCCATTGTGTGTAAGAAATGGTGGGTTGCG
GCGGTGGTGATGGGGGCAACGTCAGGGGTGTTCGTGATCTTGGTGCAGCTGAAATTGTGGATGTATTGGAAAGCAAGAGGGCAGTTACAGAGGGAGAAGAGTGAAAACAG
AGCACTTACAAGATGTGTTCAAGAACTTAGAATGAAAGGATCTTGCTTTAATTTGTGTAAAGAACCACAAATTGGGAATAGAATGAAGAGTTCTAGTGTGGAGATTAAAT
GGGGGCCTCTCACTTGGTTTTCAAGGAATTTCATTACCATTTCTCTTCTTGGCTTTTCTGCCATTGTCTTTGCTGCTTCCAAGTTCATTCTTTGCGGCTTTTAATTGCCA
TTTGTCAGGTGGTTGAAGAATTAAATATTTAATGGAGGATGAAGCAAGATGGGTCCGACATATAAAAACTATCATTATGGAAGCAAGGGGAGGCTCCATTTTTGTAGAAT
CTTTACAAATTATGACGAGAAAGATGGTGAAGAAAGGATTAAAGTACACAAGAAGATTGAGTGTTGGTTTGAAGTGAGTGTTAATTAAGCAACACTGCTTGTGTGCCTGT
TTTGGATTTCTAGACATAATTAATGAACTTGCCAATTTTGAAATTGGCCACATATAACTTTGTGGCTAATTTTGTTTATTT
Protein sequenceShow/hide protein sequence
MAETKYSSAAHIVEIPVEQENHTHNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFSLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVA
AVVMGATSGVFVILVQLKLWMYWKARGQLQREKSENRALTRCVQELRMKGSCFNLCKEPQIGNRMKSSSVEIKWGPLTWFSRNFITISLLGFSAIVFAASKFILCGF