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PI0026764 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026764
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTetratricopeptide-like helical
Genome locationchr07:3669520..3669906
RNA-Seq ExpressionPI0026764
SyntenyPI0026764
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044707.1 Tetratricopeptide-like helical [Cucumis melo var. makuwa]3.1e-4990.68Show/hide
Query:  MSVSLEALAMAGIDSNEWAMDAQEWERNEIDVVPPHLLAD-EDDEDGNYVTSTISNYSFPVDGSFGGGRRRDCKADGVHGILGIFFSLSKVIEKRASNGM
        MSVSLEALAMAGIDSNEW MDAQEWERNEIDVVPPHLLAD EDDEDG YVTSTISNY F VDGSFGG RRRD KADG H ILGIF+SLSKVIEKRASNGM
Subjt:  MSVSLEALAMAGIDSNEWAMDAQEWERNEIDVVPPHLLAD-EDDEDGNYVTSTISNYSFPVDGSFGGGRRRDCKADGVHGILGIFFSLSKVIEKRASNGM

Query:  NSVRIMVRTILGFLMVMT
        NSVRI+VRTILGFLMVMT
Subjt:  NSVRIMVRTILGFLMVMT

KAG6577295.1 hypothetical protein SDJN03_24869, partial [Cucurbita argyrosperma subsp. sororia]3.6e-3771.32Show/hide
Query:  MSVSLEALAMAGIDSNEWAMDAQEWERNEID-VVPPHLLADEDDEDGNYVTSTISNYSFPVDGSFGGGRRRDCKADGVHGILGIFFSLSKVIEKRASNGM
        MSVSLEALAMAGI SNEWAMDA+EWERNEI+  VPPHLLADEDD+D N VTST+SNYSFPV G F   RR D  A  +H   GI  SLSK +EKRASNGM
Subjt:  MSVSLEALAMAGIDSNEWAMDAQEWERNEID-VVPPHLLADEDDEDGNYVTSTISNYSFPVDGSFGGGRRRDCKADGVHGILGIFFSLSKVIEKRASNGM

Query:  NSVRIMVRTILGFLMVMTMKIISAQRSKL
        +SVRI+VRTILGFL+V  +KIISA  S +
Subjt:  NSVRIMVRTILGFLMVMTMKIISAQRSKL

KAG7015383.1 hypothetical protein SDJN02_23018, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-3771.32Show/hide
Query:  MSVSLEALAMAGIDSNEWAMDAQEWERNEID-VVPPHLLADEDDEDGNYVTSTISNYSFPVDGSFGGGRRRDCKADGVHGILGIFFSLSKVIEKRASNGM
        MSVSLEALAMAGI SNEWAMDA+EWERNEI+  VPPHLLADEDD+D N VTST+SNYSFPV G F    R D  AD +H   GI  SLSK +EKRASNGM
Subjt:  MSVSLEALAMAGIDSNEWAMDAQEWERNEID-VVPPHLLADEDDEDGNYVTSTISNYSFPVDGSFGGGRRRDCKADGVHGILGIFFSLSKVIEKRASNGM

Query:  NSVRIMVRTILGFLMVMTMKIISAQRSKL
        +SVRI+VRTILGFL+V  +KIISA  S +
Subjt:  NSVRIMVRTILGFLMVMTMKIISAQRSKL

TYK16880.1 Tetratricopeptide-like helical [Cucumis melo var. makuwa]3.6e-5389.92Show/hide
Query:  MSVSLEALAMAGIDSNEWAMDAQEWERNEIDVVPPHLLAD-EDDEDGNYVTSTISNYSFPVDGSFGGGRRRDCKADGVHGILGIFFSLSKVIEKRASNGM
        MSVSLEALAMAGIDSNEW MDAQEWERNEIDVVPPHLLAD EDDEDG YVTSTISNY F VDGSFGG RRRD KADG   ILGIF+SLSKVIEKRASNGM
Subjt:  MSVSLEALAMAGIDSNEWAMDAQEWERNEIDVVPPHLLAD-EDDEDGNYVTSTISNYSFPVDGSFGGGRRRDCKADGVHGILGIFFSLSKVIEKRASNGM

Query:  NSVRIMVRTILGFLMVMTMKIISAQRSKL
        NSVRI+VRTILGFLMVMTMKIISAQRSK+
Subjt:  NSVRIMVRTILGFLMVMTMKIISAQRSKL

XP_022943015.1 uncharacterized protein LOC111447880 [Cucurbita moschata]9.5e-2252.63Show/hide
Query:  MSVSLEALAMAGIDSNEWAMDAQEWERNEIDV-VPPHLLADEDDEDGNYVTSTISNYSFPVDGSFGGGRRRDC--KADGVHGIL---GIFFSLSKVIEKR
        MSVSLEALAMAGIDSNEWAMDA+EWERNE++  +PPHLLADEDDE+    T       FP         R  C  K DGV G+     I + L K+ EKR
Subjt:  MSVSLEALAMAGIDSNEWAMDAQEWERNEIDV-VPPHLLADEDDEDGNYVTSTISNYSFPVDGSFGGGRRRDC--KADGVHGIL---GIFFSLSKVIEKR

Query:  ASNGMNSVRIMVRTILGFLMVMTMKIISAQRSK
          N ++S+ I+   ++GFLM MT+KII+++RSK
Subjt:  ASNGMNSVRIMVRTILGFLMVMTMKIISAQRSK

TrEMBL top hitse value%identityAlignment
A0A0A0KU90 Uncharacterized protein3.4e-0970Show/hide
Query:  MSVSLEALAMAGIDSNEWAMDAQEWERN-----EIDVVPPHLLADEDDED
        M VSLEALAMAGIDSNEWAMDA+EW+ N       D++PPHLLADED+E+
Subjt:  MSVSLEALAMAGIDSNEWAMDAQEWERN-----EIDVVPPHLLADEDDED

A0A0A0KWE7 Uncharacterized protein1.4e-5086.47Show/hide
Query:  MSVSLEALAMAGIDSNEWAMDAQEWERNEIDVVPPHLLAD-EDDEDG--NYVTSTISNYSFPVDGSFGGGRRRDCKADG--VHGILGIFFSLSKVIEKRA
        MSVSLEALAMAGIDSNEWAMDA+EWERNEIDVVPPHLLAD EDDEDG  +  TSTISNY FPVDGSF G R RDCKADG   HGILGIF SLSKVIEKRA
Subjt:  MSVSLEALAMAGIDSNEWAMDAQEWERNEIDVVPPHLLAD-EDDEDG--NYVTSTISNYSFPVDGSFGGGRRRDCKADG--VHGILGIFFSLSKVIEKRA

Query:  SNGMNSVRIMVRTILGFLMVMTMKIISAQRSKL
        SNGM+SVRI+VRTILGFLMVMTMKIISAQRSK+
Subjt:  SNGMNSVRIMVRTILGFLMVMTMKIISAQRSKL

A0A5A7TS68 Tetratricopeptide-like helical1.5e-4990.68Show/hide
Query:  MSVSLEALAMAGIDSNEWAMDAQEWERNEIDVVPPHLLAD-EDDEDGNYVTSTISNYSFPVDGSFGGGRRRDCKADGVHGILGIFFSLSKVIEKRASNGM
        MSVSLEALAMAGIDSNEW MDAQEWERNEIDVVPPHLLAD EDDEDG YVTSTISNY F VDGSFGG RRRD KADG H ILGIF+SLSKVIEKRASNGM
Subjt:  MSVSLEALAMAGIDSNEWAMDAQEWERNEIDVVPPHLLAD-EDDEDGNYVTSTISNYSFPVDGSFGGGRRRDCKADGVHGILGIFFSLSKVIEKRASNGM

Query:  NSVRIMVRTILGFLMVMT
        NSVRI+VRTILGFLMVMT
Subjt:  NSVRIMVRTILGFLMVMT

A0A5D3CZU0 Tetratricopeptide-like helical1.7e-5389.92Show/hide
Query:  MSVSLEALAMAGIDSNEWAMDAQEWERNEIDVVPPHLLAD-EDDEDGNYVTSTISNYSFPVDGSFGGGRRRDCKADGVHGILGIFFSLSKVIEKRASNGM
        MSVSLEALAMAGIDSNEW MDAQEWERNEIDVVPPHLLAD EDDEDG YVTSTISNY F VDGSFGG RRRD KADG   ILGIF+SLSKVIEKRASNGM
Subjt:  MSVSLEALAMAGIDSNEWAMDAQEWERNEIDVVPPHLLAD-EDDEDGNYVTSTISNYSFPVDGSFGGGRRRDCKADGVHGILGIFFSLSKVIEKRASNGM

Query:  NSVRIMVRTILGFLMVMTMKIISAQRSKL
        NSVRI+VRTILGFLMVMTMKIISAQRSK+
Subjt:  NSVRIMVRTILGFLMVMTMKIISAQRSKL

A0A6J1FX98 uncharacterized protein LOC1114478804.6e-2252.63Show/hide
Query:  MSVSLEALAMAGIDSNEWAMDAQEWERNEIDV-VPPHLLADEDDEDGNYVTSTISNYSFPVDGSFGGGRRRDC--KADGVHGIL---GIFFSLSKVIEKR
        MSVSLEALAMAGIDSNEWAMDA+EWERNE++  +PPHLLADEDDE+    T       FP         R  C  K DGV G+     I + L K+ EKR
Subjt:  MSVSLEALAMAGIDSNEWAMDAQEWERNEIDV-VPPHLLADEDDEDGNYVTSTISNYSFPVDGSFGGGRRRDC--KADGVHGIL---GIFFSLSKVIEKR

Query:  ASNGMNSVRIMVRTILGFLMVMTMKIISAQRSK
          N ++S+ I+   ++GFLM MT+KII+++RSK
Subjt:  ASNGMNSVRIMVRTILGFLMVMTMKIISAQRSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G22320.1 unknown protein1.3e-0556.1Show/hide
Query:  LEALAMAGIDSNEWAMDAQEWERNEIDVVPPHLLADEDDED
        +EALAMAG+D  EW +  +EWE  E  VVP HLLAD+  E+
Subjt:  LEALAMAGIDSNEWAMDAQEWERNEIDVVPPHLLADEDDED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGTTTCTTTGGAAGCTTTGGCAATGGCTGGGATTGATTCCAATGAGTGGGCTATGGACGCTCAAGAATGGGAAAGAAACGAGATCGACGTTGTTCCACCACATTT
ATTAGCTGATGAAGATGACGAGGACGGCAATTATGTAACGAGTACTATTAGTAACTATAGCTTTCCGGTTGACGGGTCCTTCGGGGGAGGGCGTCGGAGAGATTGCAAAG
CTGATGGTGTCCATGGCATTTTGGGGATCTTTTTTAGTCTAAGCAAAGTCATAGAGAAAAGGGCTTCTAATGGGATGAATTCAGTGAGAATAATGGTTAGAACTATTTTA
GGGTTTTTGATGGTGATGACCATGAAGATAATTAGTGCACAAAGATCCAAGTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGTTTCTTTGGAAGCTTTGGCAATGGCTGGGATTGATTCCAATGAGTGGGCTATGGACGCTCAAGAATGGGAAAGAAACGAGATCGACGTTGTTCCACCACATTT
ATTAGCTGATGAAGATGACGAGGACGGCAATTATGTAACGAGTACTATTAGTAACTATAGCTTTCCGGTTGACGGGTCCTTCGGGGGAGGGCGTCGGAGAGATTGCAAAG
CTGATGGTGTCCATGGCATTTTGGGGATCTTTTTTAGTCTAAGCAAAGTCATAGAGAAAAGGGCTTCTAATGGGATGAATTCAGTGAGAATAATGGTTAGAACTATTTTA
GGGTTTTTGATGGTGATGACCATGAAGATAATTAGTGCACAAAGATCCAAGTTGTAA
Protein sequenceShow/hide protein sequence
MSVSLEALAMAGIDSNEWAMDAQEWERNEIDVVPPHLLADEDDEDGNYVTSTISNYSFPVDGSFGGGRRRDCKADGVHGILGIFFSLSKVIEKRASNGMNSVRIMVRTIL
GFLMVMTMKIISAQRSKL