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PI0026769 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026769
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr12:7527830..7528360
RNA-Seq ExpressionPI0026769
SyntenyPI0026769
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]2.0e-6275.29Show/hide
Query:  MEECPPSPVRNASQTVRDAYDRWTKANDKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHETIKYVYNARMKEGQSVREHVLDMMVKF
        +EECP  P  NA++TVR+ Y+RW KAN+KAR YILAS+S++L+KKHESM+TAR+IMDSLQEMFGQ S QI H+ +KY+YNARM EG SVREHVL+MMV F
Subjt:  MEECPPSPVRNASQTVRDAYDRWTKANDKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHETIKYVYNARMKEGQSVREHVLDMMVKF

Query:  NVAETNEAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEKNVAHSKR
        NVAE N AVIDE SQVSFILESL +SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KGQK GE NVA S R
Subjt:  NVAETNEAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEKNVAHSKR

KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]2.0e-6275.29Show/hide
Query:  MEECPPSPVRNASQTVRDAYDRWTKANDKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHETIKYVYNARMKEGQSVREHVLDMMVKF
        +EECP  P  NA++TVR+ Y+RW KAN+KAR YILAS+S++L+KKHESM+TAR+IMDSLQEMFGQ S QI H+ +KY+YNARM EG SVREHVL+MMV F
Subjt:  MEECPPSPVRNASQTVRDAYDRWTKANDKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHETIKYVYNARMKEGQSVREHVLDMMVKF

Query:  NVAETNEAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEKNVAHSKR
        NVAE N AVIDE SQVSFILESL +SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KGQK GE NVA S R
Subjt:  NVAETNEAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEKNVAHSKR

KAA0063887.1 gag/pol protein [Cucumis melo var. makuwa]1.4e-6380.12Show/hide
Query:  MEECPPSPVRNASQTVRDAYDRWTKANDKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHETIKYVYNARMKEGQSVREHVLDMMVKF
        MEECPP P +NASQ+V+DAYD WTKANDKA +Y+LAS+SDILSKKHE MVTARQIMDSL+EMFGQPSIQI  E IKYVYNARMKEGQSVREHVL M+V F
Subjt:  MEECPPSPVRNASQTVRDAYDRWTKANDKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHETIKYVYNARMKEGQSVREHVLDMMVKF

Query:  NVAETNEAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGE
        NVAE N+A+ DE+SQVS+IL+SLSKSFLQF SN  MNKIEY MTTLL ELQTFQSL   KGQKEGE
Subjt:  NVAETNEAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGE

TYK15919.1 gag/pol protein [Cucumis melo var. makuwa]1.4e-6380.12Show/hide
Query:  MEECPPSPVRNASQTVRDAYDRWTKANDKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHETIKYVYNARMKEGQSVREHVLDMMVKF
        MEECPP P +NASQ+V+DAYD WTKANDKA +Y+LAS+SDILSKKHE MVTARQIMDSL+EMFGQPSIQI  E IKYVYNARMKEGQSVREHVL M+V F
Subjt:  MEECPPSPVRNASQTVRDAYDRWTKANDKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHETIKYVYNARMKEGQSVREHVLDMMVKF

Query:  NVAETNEAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGE
        NVAE N+A+ DE+SQVS+IL+SLSKSFLQF SN  MNKIEY MTTLL ELQTFQSL   KGQKEGE
Subjt:  NVAETNEAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGE

TYK21841.1 gag/pol protein [Cucumis melo var. makuwa]1.5e-6276.3Show/hide
Query:  MEECPPSPVRNASQTVRDAYDRWTKANDKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHETIKYVYNARMKEGQSVREHVLDMMVKF
        M+ECPP P +NASQ+V+D YDRWTKANDKARVYILASMSDILSKKHE MVTA QIMDSL+EMFGQ SIQI  + IKYVYNA MKEGQSVR+HV+DM+V F
Subjt:  MEECPPSPVRNASQTVRDAYDRWTKANDKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHETIKYVYNARMKEGQSVREHVLDMMVKF

Query:  NVAETNEAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEKNVAHSK
        NVAE N  V DE+SQ+SFIL+SL KSFLQF SNA MNKI Y MTT L EL TFQSL   KGQKEGE NV HS+
Subjt:  NVAETNEAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEKNVAHSK

TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein9.7e-6375.29Show/hide
Query:  MEECPPSPVRNASQTVRDAYDRWTKANDKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHETIKYVYNARMKEGQSVREHVLDMMVKF
        +EECP  P  NA++TVR+ Y+RW KAN+KAR YILAS+S++L+KKHESM+TAR+IMDSLQEMFGQ S QI H+ +KY+YNARM EG SVREHVL+MMV F
Subjt:  MEECPPSPVRNASQTVRDAYDRWTKANDKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHETIKYVYNARMKEGQSVREHVLDMMVKF

Query:  NVAETNEAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEKNVAHSKR
        NVAE N AVIDE SQVSFILESL +SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KGQK GE NVA S R
Subjt:  NVAETNEAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEKNVAHSKR

A0A5A7VA67 Gag/pol protein6.7e-6480.12Show/hide
Query:  MEECPPSPVRNASQTVRDAYDRWTKANDKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHETIKYVYNARMKEGQSVREHVLDMMVKF
        MEECPP P +NASQ+V+DAYD WTKANDKA +Y+LAS+SDILSKKHE MVTARQIMDSL+EMFGQPSIQI  E IKYVYNARMKEGQSVREHVL M+V F
Subjt:  MEECPPSPVRNASQTVRDAYDRWTKANDKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHETIKYVYNARMKEGQSVREHVLDMMVKF

Query:  NVAETNEAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGE
        NVAE N+A+ DE+SQVS+IL+SLSKSFLQF SN  MNKIEY MTTLL ELQTFQSL   KGQKEGE
Subjt:  NVAETNEAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGE

A0A5D3CPJ6 Gag/pol protein9.7e-6375.29Show/hide
Query:  MEECPPSPVRNASQTVRDAYDRWTKANDKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHETIKYVYNARMKEGQSVREHVLDMMVKF
        +EECP  P  NA++TVR+ Y+RW KAN+KAR YILAS+S++L+KKHESM+TAR+IMDSLQEMFGQ S QI H+ +KY+YNARM EG SVREHVL+MMV F
Subjt:  MEECPPSPVRNASQTVRDAYDRWTKANDKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHETIKYVYNARMKEGQSVREHVLDMMVKF

Query:  NVAETNEAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEKNVAHSKR
        NVAE N AVIDE SQVSFILESL +SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KGQK GE NVA S R
Subjt:  NVAETNEAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEKNVAHSKR

A0A5D3D0D9 Gag/pol protein6.7e-6480.12Show/hide
Query:  MEECPPSPVRNASQTVRDAYDRWTKANDKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHETIKYVYNARMKEGQSVREHVLDMMVKF
        MEECPP P +NASQ+V+DAYD WTKANDKA +Y+LAS+SDILSKKHE MVTARQIMDSL+EMFGQPSIQI  E IKYVYNARMKEGQSVREHVL M+V F
Subjt:  MEECPPSPVRNASQTVRDAYDRWTKANDKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHETIKYVYNARMKEGQSVREHVLDMMVKF

Query:  NVAETNEAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGE
        NVAE N+A+ DE+SQVS+IL+SLSKSFLQF SN  MNKIEY MTTLL ELQTFQSL   KGQKEGE
Subjt:  NVAETNEAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGE

A0A5D3DDU7 Gag/pol protein7.4e-6376.3Show/hide
Query:  MEECPPSPVRNASQTVRDAYDRWTKANDKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHETIKYVYNARMKEGQSVREHVLDMMVKF
        M+ECPP P +NASQ+V+D YDRWTKANDKARVYILASMSDILSKKHE MVTA QIMDSL+EMFGQ SIQI  + IKYVYNA MKEGQSVR+HV+DM+V F
Subjt:  MEECPPSPVRNASQTVRDAYDRWTKANDKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHETIKYVYNARMKEGQSVREHVLDMMVKF

Query:  NVAETNEAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEKNVAHSK
        NVAE N  V DE+SQ+SFIL+SL KSFLQF SNA MNKI Y MTT L EL TFQSL   KGQKEGE NV HS+
Subjt:  NVAETNEAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEKNVAHSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAATGTCCTCCTTCCCCTGTTCGAAATGCATCCCAGACCGTCAGAGATGCATATGACCGCTGGACAAAGGCCAATGACAAGGCCCGAGTCTACATCTTGGCCAG
TATGTCTGACATACTGAGCAAGAAACATGAGTCCATGGTCACTGCACGTCAGATCATGGACTCGCTCCAGGAGATGTTTGGACAACCGTCCATTCAAATCTGGCACGAGA
CTATTAAATACGTTTATAATGCCCGTATGAAGGAAGGCCAATCTGTTAGAGAACATGTTCTCGACATGATGGTCAAATTCAACGTGGCAGAAACGAACGAGGCGGTCATT
GACGAGCAAAGTCAGGTATCCTTTATCTTAGAATCTCTTTCGAAGAGCTTCCTTCAATTCCGTAGCAATGCGGTTATGAACAAGATAGAGTATACCATGACTACCCTCCT
TAACGAGTTGCAGACTTTTCAATCTCTTATGAAAAATAAGGGACAGAAAGAAGGAGAGAAAAATGTTGCCCATTCCAAGAGGTTTCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAATGTCCTCCTTCCCCTGTTCGAAATGCATCCCAGACCGTCAGAGATGCATATGACCGCTGGACAAAGGCCAATGACAAGGCCCGAGTCTACATCTTGGCCAG
TATGTCTGACATACTGAGCAAGAAACATGAGTCCATGGTCACTGCACGTCAGATCATGGACTCGCTCCAGGAGATGTTTGGACAACCGTCCATTCAAATCTGGCACGAGA
CTATTAAATACGTTTATAATGCCCGTATGAAGGAAGGCCAATCTGTTAGAGAACATGTTCTCGACATGATGGTCAAATTCAACGTGGCAGAAACGAACGAGGCGGTCATT
GACGAGCAAAGTCAGGTATCCTTTATCTTAGAATCTCTTTCGAAGAGCTTCCTTCAATTCCGTAGCAATGCGGTTATGAACAAGATAGAGTATACCATGACTACCCTCCT
TAACGAGTTGCAGACTTTTCAATCTCTTATGAAAAATAAGGGACAGAAAGAAGGAGAGAAAAATGTTGCCCATTCCAAGAGGTTTCAGTAG
Protein sequenceShow/hide protein sequence
MEECPPSPVRNASQTVRDAYDRWTKANDKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHETIKYVYNARMKEGQSVREHVLDMMVKFNVAETNEAVI
DEQSQVSFILESLSKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEKNVAHSKRFQ