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PI0026780 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026780
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr03:14101073..14101885
RNA-Seq ExpressionPI0026780
SyntenyPI0026780
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035034.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.5e-1675.44Show/hide
Query:  RFIAIGPPIEQFDVDVTREYINWYKNIIRLYITRSGVVMGHLTSNNSRLRDVADDPQ
        RF A GPPIEQFD+DVT+EYINWYKNI +LYIT+ G  M HL SNN RLR+VADDPQ
Subjt:  RFIAIGPPIEQFDVDVTREYINWYKNIIRLYITRSGVVMGHLTSNNSRLRDVADDPQ

KAA0067080.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]5.1e-1777.19Show/hide
Query:  RFIAIGPPIEQFDVDVTREYINWYKNIIRLYITRSGVVMGHLTSNNSRLRDVADDPQ
        RF A GPPIEQFD+DVT+EYINWYKNI +LYIT+ G VM HL SNN RLR+VADDPQ
Subjt:  RFIAIGPPIEQFDVDVTREYINWYKNIIRLYITRSGVVMGHLTSNNSRLRDVADDPQ

TYK02367.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.5e-1675.44Show/hide
Query:  RFIAIGPPIEQFDVDVTREYINWYKNIIRLYITRSGVVMGHLTSNNSRLRDVADDPQ
        RF A GPPIEQFD+DVT+EYINWYKNI +LYIT+ G  M HL SNN RLR+VADDPQ
Subjt:  RFIAIGPPIEQFDVDVTREYINWYKNIIRLYITRSGVVMGHLTSNNSRLRDVADDPQ

XP_008449513.1 PREDICTED: mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo]3.3e-1671.93Show/hide
Query:  RFIAIGPPIEQFDVDVTREYINWYKNIIRLYITRSGVVMGHLTSNNSRLRDVADDPQ
        RF A GPPIEQFD+DVT+EYI+WYKNI +LYIT+ G  M HL SNN+RLR++ADDPQ
Subjt:  RFIAIGPPIEQFDVDVTREYINWYKNIIRLYITRSGVVMGHLTSNNSRLRDVADDPQ

XP_008463092.1 PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cucumis melo]1.5e-1675.44Show/hide
Query:  RFIAIGPPIEQFDVDVTREYINWYKNIIRLYITRSGVVMGHLTSNNSRLRDVADDPQ
        RF A GPPIEQFD+DVT+EYINWYKNI +LYIT+ G  M HL SNN RLR+VADDPQ
Subjt:  RFIAIGPPIEQFDVDVTREYINWYKNIIRLYITRSGVVMGHLTSNNSRLRDVADDPQ

TrEMBL top hitse value%identityAlignment
A0A1S3CIU3 serine/threonine-protein phosphatase 7 long form homolog7.2e-1775.44Show/hide
Query:  RFIAIGPPIEQFDVDVTREYINWYKNIIRLYITRSGVVMGHLTSNNSRLRDVADDPQ
        RF A GPPIEQFD+DVT+EYINWYKNI +LYIT+ G  M HL SNN RLR+VADDPQ
Subjt:  RFIAIGPPIEQFDVDVTREYINWYKNIIRLYITRSGVVMGHLTSNNSRLRDVADDPQ

A0A5A7SUU1 Serine/threonine-protein phosphatase 7 long form-like protein7.2e-1775.44Show/hide
Query:  RFIAIGPPIEQFDVDVTREYINWYKNIIRLYITRSGVVMGHLTSNNSRLRDVADDPQ
        RF A GPPIEQFD+DVT+EYINWYKNI +LYIT+ G  M HL SNN RLR+VADDPQ
Subjt:  RFIAIGPPIEQFDVDVTREYINWYKNIIRLYITRSGVVMGHLTSNNSRLRDVADDPQ

A0A5A7VIP6 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.5e-1777.19Show/hide
Query:  RFIAIGPPIEQFDVDVTREYINWYKNIIRLYITRSGVVMGHLTSNNSRLRDVADDPQ
        RF A GPPIEQFD+DVT+EYINWYKNI +LYIT+ G VM HL SNN RLR+VADDPQ
Subjt:  RFIAIGPPIEQFDVDVTREYINWYKNIIRLYITRSGVVMGHLTSNNSRLRDVADDPQ

A0A5D3BSH3 Serine/threonine-protein phosphatase 7 long form-like protein7.2e-1775.44Show/hide
Query:  RFIAIGPPIEQFDVDVTREYINWYKNIIRLYITRSGVVMGHLTSNNSRLRDVADDPQ
        RF A GPPIEQFD+DVT+EYINWYKNI +LYIT+ G  M HL SNN RLR+VADDPQ
Subjt:  RFIAIGPPIEQFDVDVTREYINWYKNIIRLYITRSGVVMGHLTSNNSRLRDVADDPQ

A0A5D3DUI1 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.6e-1671.93Show/hide
Query:  RFIAIGPPIEQFDVDVTREYINWYKNIIRLYITRSGVVMGHLTSNNSRLRDVADDPQ
        RF A GPPIEQFD+DVT+EYI+WYKNI +LYIT+ G  M HL SNN+RLR++ADDPQ
Subjt:  RFIAIGPPIEQFDVDVTREYINWYKNIIRLYITRSGVVMGHLTSNNSRLRDVADDPQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCATCAATTACACGGACGAACTTATGGTTCAAGATATAAGATTTATTGCTATAGGACCTCCGATTGAACAATTTGATGTGGATGTAACTCGAGAATACATCAATTG
GTACAAAAATATTATCAGGCTCTATATCACTCGATCAGGAGTTGTTATGGGTCATCTGACTTCAAATAATAGTAGACTTCGGGATGTTGCAGATGATCCACAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATCATCAATTACACGGACGAACTTATGGTTCAAGATATAAGATTTATTGCTATAGGACCTCCGATTGAACAATTTGATGTGGATGTAACTCGAGAATACATCAATTG
GTACAAAAATATTATCAGGCTCTATATCACTCGATCAGGAGTTGTTATGGGTCATCTGACTTCAAATAATAGTAGACTTCGGGATGTTGCAGATGATCCACAGTAG
Protein sequenceShow/hide protein sequence
MIINYTDELMVQDIRFIAIGPPIEQFDVDVTREYINWYKNIIRLYITRSGVVMGHLTSNNSRLRDVADDPQ