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PI0026796 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026796
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr04:12786826..12787341
RNA-Seq ExpressionPI0026796
SyntenyPI0026796
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034013.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.2e-5168.94Show/hide
Query:  MYDVPIVPAPVQRRRARVQKPDELEEVEQHVQEVPPVRQTQSGTGDVSPIMMMPAFGTGYYDSGVSQSSDFGTGYYNSEAGPSLSNYGMEYYDLGTDPSS
        MYDVPIVPAPVQRRR  VQ+PD+LEEV+QH +EVPP+ QTQS    VSP+MMMP FGT YYDSGV QSSDFG GYYNSEAG S +++G +YYDLG+DPSS
Subjt:  MYDVPIVPAPVQRRRARVQKPDELEEVEQHVQEVPPVRQTQSGTGDVSPIMMMPAFGTGYYDSGVSQSSDFGTGYYNSEAGPSLSNYGMEYYDLGTDPSS

Query:  SYMHGHGRGRGEHNEYLYYEAPTAVLEQPDEQKQQVNQKGPEQQRVQGRRDNQLEIGDVQV
        SYMHGHGRGRGEHNEYLYYE P AV EQ +E +QQ N   P Q   Q +++NQ EI   +V
Subjt:  SYMHGHGRGRGEHNEYLYYEAPTAVLEQPDEQKQQVNQKGPEQQRVQGRRDNQLEIGDVQV

KAA0037866.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.8e-5368.82Show/hide
Query:  MYDVPIVPAPVQRRRARVQKPDELEEVEQHVQEVPPV--RQTQSGTGDVSPIMMMPAFGTGYYDSGVSQSSDFGTGYYNSEAGPSLSNYGMEYYDLGTDP
        MYDV IVPAPVQR+R  VQ+ D+LEEV+QHV+EVPPV   QTQS    VSP+MMMP FGT YYD GV QSSDFG  YYNSEAGPS +++G +YYDLG++P
Subjt:  MYDVPIVPAPVQRRRARVQKPDELEEVEQHVQEVPPV--RQTQSGTGDVSPIMMMPAFGTGYYDSGVSQSSDFGTGYYNSEAGPSLSNYGMEYYDLGTDP

Query:  SSSYMHGHGRGRGEHNEYLYYEAPTAVLEQPDEQKQQVNQKGPEQQRVQGRRDNQLEIGDVQVVEHIDFF
        SSSYMHGHGRGRGEHNEYLYYE PT V +Q DEQ+QQ  ++    +  +   DNQLEI DVQVVEHIDFF
Subjt:  SSSYMHGHGRGRGEHNEYLYYEAPTAVLEQPDEQKQQVNQKGPEQQRVQGRRDNQLEIGDVQVVEHIDFF

KAA0051098.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]2.5e-5476.67Show/hide
Query:  MYDVPIVPAPVQRRRARVQKPDELEEVEQHVQEVPPVRQTQSGTGDVSPIMMMPAFGTGYYDSGVSQSSDFGTGYYNSEAGPSLSNYGMEYYDLGTDPSS
        MYDVPIVPAP+QRRRA VQ+ DELEEV+QH++EVPPV QT+S T  VSP++MM AFGTGYYD GVSQSSDFGTGYYN   GPS SN+G EYYDLGT+PSS
Subjt:  MYDVPIVPAPVQRRRARVQKPDELEEVEQHVQEVPPVRQTQSGTGDVSPIMMMPAFGTGYYDSGVSQSSDFGTGYYNSEAGPSLSNYGMEYYDLGTDPSS

Query:  SYMHGHGRGRGEHNEYLYYEAPTAVLEQPDEQKQQVNQKGPEQQRVQGRR
        SYMHGHGRGRGEHNEYLYY AP AV E+P+EQ+QQ NQ+  +QQRVQ RR
Subjt:  SYMHGHGRGRGEHNEYLYYEAPTAVLEQPDEQKQQVNQKGPEQQRVQGRR

KAA0055624.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.2e-5168.94Show/hide
Query:  MYDVPIVPAPVQRRRARVQKPDELEEVEQHVQEVPPVRQTQSGTGDVSPIMMMPAFGTGYYDSGVSQSSDFGTGYYNSEAGPSLSNYGMEYYDLGTDPSS
        MYDVPIVPAPVQRRR  VQ+PD+LEEV+QH +EVPP+ QT+S    VSP+MMMP FGT YYDSGV QSSDFG GYYNSEAG S +++G +YYDLG+DPSS
Subjt:  MYDVPIVPAPVQRRRARVQKPDELEEVEQHVQEVPPVRQTQSGTGDVSPIMMMPAFGTGYYDSGVSQSSDFGTGYYNSEAGPSLSNYGMEYYDLGTDPSS

Query:  SYMHGHGRGRGEHNEYLYYEAPTAVLEQPDEQKQQVNQKGPEQQRVQGRRDNQLEIGDVQV
        SYMHGHGRGRGEHNEYLYYE P AV EQ DE +QQ N   P Q   Q +++NQ EI   +V
Subjt:  SYMHGHGRGRGEHNEYLYYEAPTAVLEQPDEQKQQVNQKGPEQQRVQGRRDNQLEIGDVQV

TYK09816.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.8e-5368.82Show/hide
Query:  MYDVPIVPAPVQRRRARVQKPDELEEVEQHVQEVPPV--RQTQSGTGDVSPIMMMPAFGTGYYDSGVSQSSDFGTGYYNSEAGPSLSNYGMEYYDLGTDP
        MYDV IVPAPVQR+R  VQ+ D+LEEV+QHV+EVPPV   QTQS    VSP+MMMP FGT YYD GV QSSDFG  YYNSEAGPS +++G +YYDLG++P
Subjt:  MYDVPIVPAPVQRRRARVQKPDELEEVEQHVQEVPPV--RQTQSGTGDVSPIMMMPAFGTGYYDSGVSQSSDFGTGYYNSEAGPSLSNYGMEYYDLGTDP

Query:  SSSYMHGHGRGRGEHNEYLYYEAPTAVLEQPDEQKQQVNQKGPEQQRVQGRRDNQLEIGDVQVVEHIDFF
        SSSYMHGHGRGRGEHNEYLYYE PT V +Q DEQ+QQ  ++    +  +   DNQLEI DVQVVEHIDFF
Subjt:  SSSYMHGHGRGRGEHNEYLYYEAPTAVLEQPDEQKQQVNQKGPEQQRVQGRRDNQLEIGDVQVVEHIDFF

TrEMBL top hitse value%identityAlignment
A0A5A7SU33 Serine/threonine-protein phosphatase 7 long form-like protein5.7e-5268.94Show/hide
Query:  MYDVPIVPAPVQRRRARVQKPDELEEVEQHVQEVPPVRQTQSGTGDVSPIMMMPAFGTGYYDSGVSQSSDFGTGYYNSEAGPSLSNYGMEYYDLGTDPSS
        MYDVPIVPAPVQRRR  VQ+PD+LEEV+QH +EVPP+ QTQS    VSP+MMMP FGT YYDSGV QSSDFG GYYNSEAG S +++G +YYDLG+DPSS
Subjt:  MYDVPIVPAPVQRRRARVQKPDELEEVEQHVQEVPPVRQTQSGTGDVSPIMMMPAFGTGYYDSGVSQSSDFGTGYYNSEAGPSLSNYGMEYYDLGTDPSS

Query:  SYMHGHGRGRGEHNEYLYYEAPTAVLEQPDEQKQQVNQKGPEQQRVQGRRDNQLEIGDVQV
        SYMHGHGRGRGEHNEYLYYE P AV EQ +E +QQ N   P Q   Q +++NQ EI   +V
Subjt:  SYMHGHGRGRGEHNEYLYYEAPTAVLEQPDEQKQQVNQKGPEQQRVQGRRDNQLEIGDVQV

A0A5A7T6Q6 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.4e-5368.82Show/hide
Query:  MYDVPIVPAPVQRRRARVQKPDELEEVEQHVQEVPPV--RQTQSGTGDVSPIMMMPAFGTGYYDSGVSQSSDFGTGYYNSEAGPSLSNYGMEYYDLGTDP
        MYDV IVPAPVQR+R  VQ+ D+LEEV+QHV+EVPPV   QTQS    VSP+MMMP FGT YYD GV QSSDFG  YYNSEAGPS +++G +YYDLG++P
Subjt:  MYDVPIVPAPVQRRRARVQKPDELEEVEQHVQEVPPV--RQTQSGTGDVSPIMMMPAFGTGYYDSGVSQSSDFGTGYYNSEAGPSLSNYGMEYYDLGTDP

Query:  SSSYMHGHGRGRGEHNEYLYYEAPTAVLEQPDEQKQQVNQKGPEQQRVQGRRDNQLEIGDVQVVEHIDFF
        SSSYMHGHGRGRGEHNEYLYYE PT V +Q DEQ+QQ  ++    +  +   DNQLEI DVQVVEHIDFF
Subjt:  SSSYMHGHGRGRGEHNEYLYYEAPTAVLEQPDEQKQQVNQKGPEQQRVQGRRDNQLEIGDVQVVEHIDFF

A0A5A7U731 Serine/threonine-protein phosphatase 7 long form-like protein1.2e-5476.67Show/hide
Query:  MYDVPIVPAPVQRRRARVQKPDELEEVEQHVQEVPPVRQTQSGTGDVSPIMMMPAFGTGYYDSGVSQSSDFGTGYYNSEAGPSLSNYGMEYYDLGTDPSS
        MYDVPIVPAP+QRRRA VQ+ DELEEV+QH++EVPPV QT+S T  VSP++MM AFGTGYYD GVSQSSDFGTGYYN   GPS SN+G EYYDLGT+PSS
Subjt:  MYDVPIVPAPVQRRRARVQKPDELEEVEQHVQEVPPVRQTQSGTGDVSPIMMMPAFGTGYYDSGVSQSSDFGTGYYNSEAGPSLSNYGMEYYDLGTDPSS

Query:  SYMHGHGRGRGEHNEYLYYEAPTAVLEQPDEQKQQVNQKGPEQQRVQGRR
        SYMHGHGRGRGEHNEYLYY AP AV E+P+EQ+QQ NQ+  +QQRVQ RR
Subjt:  SYMHGHGRGRGEHNEYLYYEAPTAVLEQPDEQKQQVNQKGPEQQRVQGRR

A0A5A7UKC7 Serine/threonine-protein phosphatase 7 long form-like protein5.7e-5268.94Show/hide
Query:  MYDVPIVPAPVQRRRARVQKPDELEEVEQHVQEVPPVRQTQSGTGDVSPIMMMPAFGTGYYDSGVSQSSDFGTGYYNSEAGPSLSNYGMEYYDLGTDPSS
        MYDVPIVPAPVQRRR  VQ+PD+LEEV+QH +EVPP+ QT+S    VSP+MMMP FGT YYDSGV QSSDFG GYYNSEAG S +++G +YYDLG+DPSS
Subjt:  MYDVPIVPAPVQRRRARVQKPDELEEVEQHVQEVPPVRQTQSGTGDVSPIMMMPAFGTGYYDSGVSQSSDFGTGYYNSEAGPSLSNYGMEYYDLGTDPSS

Query:  SYMHGHGRGRGEHNEYLYYEAPTAVLEQPDEQKQQVNQKGPEQQRVQGRRDNQLEIGDVQV
        SYMHGHGRGRGEHNEYLYYE P AV EQ DE +QQ N   P Q   Q +++NQ EI   +V
Subjt:  SYMHGHGRGRGEHNEYLYYEAPTAVLEQPDEQKQQVNQKGPEQQRVQGRRDNQLEIGDVQV

A0A5D3CHF6 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.4e-5368.82Show/hide
Query:  MYDVPIVPAPVQRRRARVQKPDELEEVEQHVQEVPPV--RQTQSGTGDVSPIMMMPAFGTGYYDSGVSQSSDFGTGYYNSEAGPSLSNYGMEYYDLGTDP
        MYDV IVPAPVQR+R  VQ+ D+LEEV+QHV+EVPPV   QTQS    VSP+MMMP FGT YYD GV QSSDFG  YYNSEAGPS +++G +YYDLG++P
Subjt:  MYDVPIVPAPVQRRRARVQKPDELEEVEQHVQEVPPV--RQTQSGTGDVSPIMMMPAFGTGYYDSGVSQSSDFGTGYYNSEAGPSLSNYGMEYYDLGTDP

Query:  SSSYMHGHGRGRGEHNEYLYYEAPTAVLEQPDEQKQQVNQKGPEQQRVQGRRDNQLEIGDVQVVEHIDFF
        SSSYMHGHGRGRGEHNEYLYYE PT V +Q DEQ+QQ  ++    +  +   DNQLEI DVQVVEHIDFF
Subjt:  SSSYMHGHGRGRGEHNEYLYYEAPTAVLEQPDEQKQQVNQKGPEQQRVQGRRDNQLEIGDVQVVEHIDFF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGATGTACCTATTGTACCTGCACCAGTTCAAAGGAGACGTGCTCGAGTGCAAAAGCCCGATGAATTGGAAGAAGTTGAACAACACGTGCAAGAAGTGCCTCCTGT
GAGACAAACACAAAGCGGGACTGGTGACGTTAGTCCAATAATGATGATGCCTGCATTTGGAACAGGATATTATGATTCAGGAGTCAGTCAATCATCAGACTTCGGGACAG
GATATTATAATTCAGAGGCAGGTCCATCATTATCAAACTATGGAATGGAATACTACGATTTAGGGACTGATCCATCATCTTCATACATGCATGGACATGGGCGTGGTCGT
GGAGAACATAACGAATATTTGTACTACGAAGCGCCTACAGCGGTACTCGAGCAGCCAGATGAGCAAAAACAACAAGTGAATCAGAAGGGACCAGAGCAACAAAGAGTGCA
GGGTCGACGAGACAACCAACTAGAAATCGGCGACGTCCAGGTTGTGGAACACATTGATTTTTTTTTAAAATTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTATGATGTACCTATTGTACCTGCACCAGTTCAAAGGAGACGTGCTCGAGTGCAAAAGCCCGATGAATTGGAAGAAGTTGAACAACACGTGCAAGAAGTGCCTCCTGT
GAGACAAACACAAAGCGGGACTGGTGACGTTAGTCCAATAATGATGATGCCTGCATTTGGAACAGGATATTATGATTCAGGAGTCAGTCAATCATCAGACTTCGGGACAG
GATATTATAATTCAGAGGCAGGTCCATCATTATCAAACTATGGAATGGAATACTACGATTTAGGGACTGATCCATCATCTTCATACATGCATGGACATGGGCGTGGTCGT
GGAGAACATAACGAATATTTGTACTACGAAGCGCCTACAGCGGTACTCGAGCAGCCAGATGAGCAAAAACAACAAGTGAATCAGAAGGGACCAGAGCAACAAAGAGTGCA
GGGTCGACGAGACAACCAACTAGAAATCGGCGACGTCCAGGTTGTGGAACACATTGATTTTTTTTTAAAATTGTAA
Protein sequenceShow/hide protein sequence
MYDVPIVPAPVQRRRARVQKPDELEEVEQHVQEVPPVRQTQSGTGDVSPIMMMPAFGTGYYDSGVSQSSDFGTGYYNSEAGPSLSNYGMEYYDLGTDPSSSYMHGHGRGR
GEHNEYLYYEAPTAVLEQPDEQKQQVNQKGPEQQRVQGRRDNQLEIGDVQVVEHIDFFLKL