; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0026802 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026802
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr05:17280256..17281089
RNA-Seq ExpressionPI0026802
SyntenyPI0026802
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041264.1 hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa]7.6e-2438.24Show/hide
Query:  VSFDAEAINSLYDVPNDVETPGHEYVVSPMKKMAREALEVIAWPGVAWEIRPMGKYLLYPHQLTTEANVWLFFIKKKIFPTRHDSTINLESAMILYCILT
        V F  +AIN+LY + N+    GH    +P  +  ++ALE I WPG  W+  P  KY L+P+ L TE +VWL FIKK I PTRHDSTI++E  M+LY    
Subjt:  VSFDAEAINSLYDVPNDVETPGHEYVVSPMKKMAREALEVIAWPGVAWEIRPMGKYLLYPHQLTTEANVWLFFIKKKIFPTRHDSTINLESAMILYCILT

Query:  KKCVNLGDLIATSILAWMRAPKGAMPFPSTIEAICVKVVPFLGAMNTVPIPGVLCNQMSLNRMITLHAHK
               ++    ++AW++ P GA PF    + + +K  P L     V +   +C   +L+R IT+H +K
Subjt:  KKCVNLGDLIATSILAWMRAPKGAMPFPSTIEAICVKVVPFLGAMNTVPIPGVLCNQMSLNRMITLHAHK

KAA0049609.1 transposase [Cucumis melo var. makuwa]8.4e-3150.72Show/hide
Query:  VSFDAEAINSLYDVPNDVET-PGHEYVVSPMKKMAREALEVIAWPGVAWEIRPMGKYLLYPHQLTTEANVWLFFIKKKIFPTRHDSTINLESAMILYCIL
        V F  E IN LYD+PND+   PG   +V   +  A++ +++I WP       P  +  L+PHQLT EANVWLFFIKKKIFPT HDSTI  E A++LYCI 
Subjt:  VSFDAEAINSLYDVPNDVET-PGHEYVVSPMKKMAREALEVIAWPGVAWEIRPMGKYLLYPHQLTTEANVWLFFIKKKIFPTRHDSTINLESAMILYCIL

Query:  TKKCVNLGDLIATSILAWMRAPKGAMPFPSTIEAICVK
         KK  NLG ++  + L+WMR PK A PFP+T++ +C+K
Subjt:  TKKCVNLGDLIATSILAWMRAPKGAMPFPSTIEAICVK

KAA0062748.1 hypothetical protein E6C27_scaffold382G00810 [Cucumis melo var. makuwa]2.6e-2440.94Show/hide
Query:  SFDAEAINSLYDVPNDVET-PGHEYVVSPMKKMAREALEVIAWPGVAWEIRPMGKYLLYPHQLTTEANVWLFFIKKKIFPTRHDSTINLESAMILYCILT
        SF+ +AIN LY++P+D +  P   + + P++ + +  L+VI W G  WE  P G+  LYPHQLT EANVWLFFIKKKIFPTRHDST  L  ++    I  
Subjt:  SFDAEAINSLYDVPNDVET-PGHEYVVSPMKKMAREALEVIAWPGVAWEIRPMGKYLLYPHQLTTEANVWLFFIKKKIFPTRHDSTINLESAMILYCILT

Query:  KKCVNLGDLIATSILAWMRAPKGAMPFPSTIEAICVKVVPFLGAMNTVPIPGVLCNQMSLNRMITLHAHKE
         +   LG   A        AP+      +TI  +C+K +  L  +    + G  CN   LNR+I LH ++E
Subjt:  KKCVNLGDLIATSILAWMRAPKGAMPFPSTIEAICVKVVPFLGAMNTVPIPGVLCNQMSLNRMITLHAHKE

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]2.3e-3654.61Show/hide
Query:  FDAEAINSLYDVPNDVETPGHEYVVSPMKKMAREALEVIAWPGVAWEIRPMG-KYLLYPHQLTTEANVWLFFIKKKIFPTRHDSTINLESAMILYCILTK
        F+ E IN LY+ PND E  G E V    K +A+EAL+V+AWPG+  E++PM  +Y LYPH LTT+ANVW+FF K KIFPT +DSTI+++  +ILYCI+ K
Subjt:  FDAEAINSLYDVPNDVETPGHEYVVSPMKKMAREALEVIAWPGVAWEIRPMG-KYLLYPHQLTTEANVWLFFIKKKIFPTRHDSTINLESAMILYCILTK

Query:  KCVNLGDLIATSILAWMRAPKGAMPFPSTIEAICVKVVPFL
        K +NL ++I  +IL WM  PK AMPFPS +E +C+K +P L
Subjt:  KCVNLGDLIATSILAWMRAPKGAMPFPSTIEAICVKVVPFL

TYK15967.1 hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]8.4e-3150.72Show/hide
Query:  VSFDAEAINSLYDVPNDVET-PGHEYVVSPMKKMAREALEVIAWPGVAWEIRPMGKYLLYPHQLTTEANVWLFFIKKKIFPTRHDSTINLESAMILYCIL
        V F  E IN LYD+PND+   PG   +V   +  A++ +++I WP       P  +  L+PHQLT EANVWLFFIKKKIFPT HDSTI  E A++LYCI 
Subjt:  VSFDAEAINSLYDVPNDVET-PGHEYVVSPMKKMAREALEVIAWPGVAWEIRPMGKYLLYPHQLTTEANVWLFFIKKKIFPTRHDSTINLESAMILYCIL

Query:  TKKCVNLGDLIATSILAWMRAPKGAMPFPSTIEAICVK
         KK  NLG ++  + L+WMR PK A PFP+T++ +C+K
Subjt:  TKKCVNLGDLIATSILAWMRAPKGAMPFPSTIEAICVK

TrEMBL top hitse value%identityAlignment
A0A5A7U806 Transposase4.1e-3150.72Show/hide
Query:  VSFDAEAINSLYDVPNDVET-PGHEYVVSPMKKMAREALEVIAWPGVAWEIRPMGKYLLYPHQLTTEANVWLFFIKKKIFPTRHDSTINLESAMILYCIL
        V F  E IN LYD+PND+   PG   +V   +  A++ +++I WP       P  +  L+PHQLT EANVWLFFIKKKIFPT HDSTI  E A++LYCI 
Subjt:  VSFDAEAINSLYDVPNDVET-PGHEYVVSPMKKMAREALEVIAWPGVAWEIRPMGKYLLYPHQLTTEANVWLFFIKKKIFPTRHDSTINLESAMILYCIL

Query:  TKKCVNLGDLIATSILAWMRAPKGAMPFPSTIEAICVK
         KK  NLG ++  + L+WMR PK A PFP+T++ +C+K
Subjt:  TKKCVNLGDLIATSILAWMRAPKGAMPFPSTIEAICVK

A0A5A7V6M5 Gag/pol protein1.1e-3654.61Show/hide
Query:  FDAEAINSLYDVPNDVETPGHEYVVSPMKKMAREALEVIAWPGVAWEIRPMG-KYLLYPHQLTTEANVWLFFIKKKIFPTRHDSTINLESAMILYCILTK
        F+ E IN LY+ PND E  G E V    K +A+EAL+V+AWPG+  E++PM  +Y LYPH LTT+ANVW+FF K KIFPT +DSTI+++  +ILYCI+ K
Subjt:  FDAEAINSLYDVPNDVETPGHEYVVSPMKKMAREALEVIAWPGVAWEIRPMG-KYLLYPHQLTTEANVWLFFIKKKIFPTRHDSTINLESAMILYCILTK

Query:  KCVNLGDLIATSILAWMRAPKGAMPFPSTIEAICVKVVPFL
        K +NL ++I  +IL WM  PK AMPFPS +E +C+K +P L
Subjt:  KCVNLGDLIATSILAWMRAPKGAMPFPSTIEAICVKVVPFL

A0A5D3CBF2 Uncharacterized protein1.3e-2440.94Show/hide
Query:  SFDAEAINSLYDVPNDVET-PGHEYVVSPMKKMAREALEVIAWPGVAWEIRPMGKYLLYPHQLTTEANVWLFFIKKKIFPTRHDSTINLESAMILYCILT
        SF+ +AIN LY++P+D +  P   + + P++ + +  L+VI W G  WE  P G+  LYPHQLT EANVWLFFIKKKIFPTRHDST  L  ++    I  
Subjt:  SFDAEAINSLYDVPNDVET-PGHEYVVSPMKKMAREALEVIAWPGVAWEIRPMGKYLLYPHQLTTEANVWLFFIKKKIFPTRHDSTINLESAMILYCILT

Query:  KKCVNLGDLIATSILAWMRAPKGAMPFPSTIEAICVKVVPFLGAMNTVPIPGVLCNQMSLNRMITLHAHKE
         +   LG   A        AP+      +TI  +C+K +  L  +    + G  CN   LNR+I LH ++E
Subjt:  KKCVNLGDLIATSILAWMRAPKGAMPFPSTIEAICVKVVPFLGAMNTVPIPGVLCNQMSLNRMITLHAHKE

A0A5D3CVL7 Uncharacterized protein4.1e-3150.72Show/hide
Query:  VSFDAEAINSLYDVPNDVET-PGHEYVVSPMKKMAREALEVIAWPGVAWEIRPMGKYLLYPHQLTTEANVWLFFIKKKIFPTRHDSTINLESAMILYCIL
        V F  E IN LYD+PND+   PG   +V   +  A++ +++I WP       P  +  L+PHQLT EANVWLFFIKKKIFPT HDSTI  E A++LYCI 
Subjt:  VSFDAEAINSLYDVPNDVET-PGHEYVVSPMKKMAREALEVIAWPGVAWEIRPMGKYLLYPHQLTTEANVWLFFIKKKIFPTRHDSTINLESAMILYCIL

Query:  TKKCVNLGDLIATSILAWMRAPKGAMPFPSTIEAICVK
         KK  NLG ++  + L+WMR PK A PFP+T++ +C+K
Subjt:  TKKCVNLGDLIATSILAWMRAPKGAMPFPSTIEAICVK

A0A5D3CW17 Uncharacterized protein3.7e-2438.24Show/hide
Query:  VSFDAEAINSLYDVPNDVETPGHEYVVSPMKKMAREALEVIAWPGVAWEIRPMGKYLLYPHQLTTEANVWLFFIKKKIFPTRHDSTINLESAMILYCILT
        V F  +AIN+LY + N+    GH    +P  +  ++ALE I WPG  W+  P  KY L+P+ L TE +VWL FIKK I PTRHDSTI++E  M+LY    
Subjt:  VSFDAEAINSLYDVPNDVETPGHEYVVSPMKKMAREALEVIAWPGVAWEIRPMGKYLLYPHQLTTEANVWLFFIKKKIFPTRHDSTINLESAMILYCILT

Query:  KKCVNLGDLIATSILAWMRAPKGAMPFPSTIEAICVKVVPFLGAMNTVPIPGVLCNQMSLNRMITLHAHK
               ++    ++AW++ P GA PF    + + +K  P L     V +   +C   +L+R IT+H +K
Subjt:  KKCVNLGDLIATSILAWMRAPKGAMPFPSTIEAICVKVVPFLGAMNTVPIPGVLCNQMSLNRMITLHAHK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGCTTCGACGCAGAGGCCATCAACAGTCTATACGACGTGCCCAACGATGTTGAAACGCCTGGGCATGAATATGTGGTAAGCCCAATGAAGAAGATGGCCCGGGA
AGCGTTAGAAGTCATCGCCTGGCCTGGGGTCGCATGGGAGATCAGGCCGATGGGAAAATATTTGCTTTATCCACACCAACTAACCACAGAAGCAAATGTGTGGCTGTTTT
TCATCAAGAAGAAGATATTCCCCACGCGCCATGACAGCACCATCAATTTAGAGTCAGCGATGATACTTTACTGCATACTGACAAAGAAATGCGTAAACCTCGGCGATCTG
ATAGCCACATCCATCCTGGCTTGGATGCGAGCTCCCAAGGGCGCCATGCCTTTCCCATCTACAATTGAAGCCATCTGCGTGAAGGTCGTACCCTTCCTAGGTGCCATGAA
CACTGTTCCAATTCCAGGCGTCTTGTGCAACCAAATGTCTTTAAATCGCATGATCACACTCCATGCCCACAAGGAAATGGAAAGGCGATCTAAGACATTGGGTGACACGG
CCAATGAAGGCGCAGCCCAAGCAGAATGCAAAAGAAAGGCCCCAGTCGCCGCATCAACCCCTCAACGAAAAGTAAAAAACCAAGGGTTGATGCGGCAAAACAACCTCTTC
CACTCAAAGTTATCCACCCTCCTTCCCGCCCAACCAAAAGAATTCCCTCCAAAATCCAAAAAATTCCAGCCTCTCCCAACCTCCTCGCCACTCTTCGCCTACTCCATCCA
CCCCACCTTCCTCTATCATTTCCCCCCACCATTCACCTCTTCCTCACCTCTTATCCCCCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAGCTTCGACGCAGAGGCCATCAACAGTCTATACGACGTGCCCAACGATGTTGAAACGCCTGGGCATGAATATGTGGTAAGCCCAATGAAGAAGATGGCCCGGGA
AGCGTTAGAAGTCATCGCCTGGCCTGGGGTCGCATGGGAGATCAGGCCGATGGGAAAATATTTGCTTTATCCACACCAACTAACCACAGAAGCAAATGTGTGGCTGTTTT
TCATCAAGAAGAAGATATTCCCCACGCGCCATGACAGCACCATCAATTTAGAGTCAGCGATGATACTTTACTGCATACTGACAAAGAAATGCGTAAACCTCGGCGATCTG
ATAGCCACATCCATCCTGGCTTGGATGCGAGCTCCCAAGGGCGCCATGCCTTTCCCATCTACAATTGAAGCCATCTGCGTGAAGGTCGTACCCTTCCTAGGTGCCATGAA
CACTGTTCCAATTCCAGGCGTCTTGTGCAACCAAATGTCTTTAAATCGCATGATCACACTCCATGCCCACAAGGAAATGGAAAGGCGATCTAAGACATTGGGTGACACGG
CCAATGAAGGCGCAGCCCAAGCAGAATGCAAAAGAAAGGCCCCAGTCGCCGCATCAACCCCTCAACGAAAAGTAAAAAACCAAGGGTTGATGCGGCAAAACAACCTCTTC
CACTCAAAGTTATCCACCCTCCTTCCCGCCCAACCAAAAGAATTCCCTCCAAAATCCAAAAAATTCCAGCCTCTCCCAACCTCCTCGCCACTCTTCGCCTACTCCATCCA
CCCCACCTTCCTCTATCATTTCCCCCCACCATTCACCTCTTCCTCACCTCTTATCCCCCATTAA
Protein sequenceShow/hide protein sequence
MVSFDAEAINSLYDVPNDVETPGHEYVVSPMKKMAREALEVIAWPGVAWEIRPMGKYLLYPHQLTTEANVWLFFIKKKIFPTRHDSTINLESAMILYCILTKKCVNLGDL
IATSILAWMRAPKGAMPFPSTIEAICVKVVPFLGAMNTVPIPGVLCNQMSLNRMITLHAHKEMERRSKTLGDTANEGAAQAECKRKAPVAASTPQRKVKNQGLMRQNNLF
HSKLSTLLPAQPKEFPPKSKKFQPLPTSSPLFAYSIHPTFLYHFPPPFTSSSPLIPH