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PI0026807 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026807
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol polyprotein
Genome locationchr10:2382751..2383597
RNA-Seq ExpressionPI0026807
SyntenyPI0026807
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051798.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.3e-2749.41Show/hide
Query:  MMDDDT--EYNVRVLDIANESFALKEKIVEPKLVREVLHSLPRHFDMKLVVIEEANDIATLKLDELFGSLRTFELTFDDKSDKKGKGLAFHTVNDEEPNQ
        M +D+T  EYN RVL+IAN+S  L EKI E K+V +VL SLPR FDMK+  IEEA DI TLKLDELFGSL TFE+   D+  KKGKG+AF ++ D+E N 
Subjt:  MMDDDT--EYNVRVLDIANESFALKEKIVEPKLVREVLHSLPRHFDMKLVVIEEANDIATLKLDELFGSLRTFELTFDDKSDKKGKGLAFHTVNDEEPNQ

Query:  GKDKAVDDNLADSIALLTKQFSKIVWRFHKRPGNYGGQYSKD--HDNYNNATSGMNVVGRQRENEKSKRK
              + N  +SI LLTKQFSK+  +F  +  N GG+  K   HD   N+   +N    +R ++  K+K
Subjt:  GKDKAVDDNLADSIALLTKQFSKIVWRFHKRPGNYGGQYSKD--HDNYNNATSGMNVVGRQRENEKSKRK

KAA0057162.1 Receptor-like protein 12 [Cucumis melo var. makuwa]6.8e-3241.87Show/hide
Query:  MMDDDT--EYNVRVLDIANESFALKEKIVEPKLVREVLHSLPRHFDMKLVVIEEANDIATLKLDELFGSLRTFELTFDDKSDKKGKGLAFHTVNDEEPNQ
        M++++T  ++NV+V+D+ NESFAL+EKI E K+V+ V+ SLP  F+MK+  IE+ANDI  +KL ELFGSLRTFEL+FDD S KK  G+AF  + +E    
Subjt:  MMDDDT--EYNVRVLDIANESFALKEKIVEPKLVREVLHSLPRHFDMKLVVIEEANDIATLKLDELFGSLRTFELTFDDKSDKKGKGLAFHTVNDEEPNQ

Query:  GKDKAVDDNLADSIALLTKQFSKIVWRFHKRPGNYGGQYSKDHDNYNNATSGMNVVGRQRENEKSKRKVFLQLFLTESTTSSDNEEDVRALLGCLTNDVV
         +    D+NL + IALL+++F+K   +F+KR  N   Q++++  + + + SG + V       K K          E+T+ SD EE  RAL+ C   +V 
Subjt:  GKDKAVDDNLADSIALLTKQFSKIVWRFHKRPGNYGGQYSKDHDNYNNATSGMNVVGRQRENEKSKRKVFLQLFLTESTTSSDNEEDVRALLGCLTNDVV

Query:  KEV
         E+
Subjt:  KEV

KAA0065593.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.8e-2948.54Show/hide
Query:  MMDDDTE---YNVRVLDIANESFALKEKIVEPKLVREVLHSLPRHFDMKLVVIEEANDIATLKLDELFGSLRTFELTFDDKSDKKGKGLAFHTVNDEEPN
        MM +D     ++VRVLD+ NES AL   I   KLVR+VL SLP  F MK+VVIEEANDI T+KLDELFGSLRTFEL  +D   KK  G+A   +ND  P 
Subjt:  MMDDDTE---YNVRVLDIANESFALKEKIVEPKLVREVLHSLPRHFDMKLVVIEEANDIATLKLDELFGSLRTFELTFDDKSDKKGKGLAFHTVNDEEPN

Query:  QGKDKAVDDNLADSIALLTKQFSKIVWRFHKRPGNYGGQYSKDHDN---YNNATSGMNVVGRQRENEKSKR
          K++  DDNLA S ALLTKQ SK+  +FHKR  NY    +++ ++     +++       + ++ +KSKR
Subjt:  QGKDKAVDDNLADSIALLTKQFSKIVWRFHKRPGNYGGQYSKDHDN---YNNATSGMNVVGRQRENEKSKR

KAA0066403.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]2.7e-2836.59Show/hide
Query:  MMDDD--TEYNVRVLDIANESFALKEKIVEPKLVREVLHSLPRHFDMKLVVIEEANDIATLKLDELFGSLRTFELTFDDKSDKKGKGLAFHTVNDEEPNQ
        M +D+  ++YN RVL+I NES  L E+I + K+VR+VL SLP+ FDMK+  IEE +DI TLKLDELFGSL TFE+T  D+  KKGKG+AF +VN  E   
Subjt:  MMDDD--TEYNVRVLDIANESFALKEKIVEPKLVREVLHSLPRHFDMKLVVIEEANDIATLKLDELFGSLRTFELTFDDKSDKKGKGLAFHTVNDEEPNQ

Query:  GKDKAVDDNLADSIALLTKQFSKIVWRFHKRPGNYG------GQYSKDHDN----YNNATSGMNVVGRQRENE----------------KSKRKVFLQLF
          D  ++ N+ +SIALLTKQF+ ++ R  K     G       QY + +DN     NN  S   + G  ++ E                K K+   + L 
Subjt:  GKDKAVDDNLADSIALLTKQFSKIVWRFHKRPGNYG------GQYSKDHDN----YNNATSGMNVVGRQRENE----------------KSKRKVFLQLF

Query:  LTESTTSSDNEEDVRALLGCLTNDVVKEVVISDRLENESKVGVSLVNSSTAGICVDKLYVKWKKDLSVLKQQKDRI
          ES  S D++ ++ A    +T+            EN        + S    + ++KL   WK+D      QK+RI
Subjt:  LTESTTSSDNEEDVRALLGCLTNDVVKEVVISDRLENESKVGVSLVNSSTAGICVDKLYVKWKKDLSVLKQQKDRI

TYK21443.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.3e-2749.41Show/hide
Query:  MMDDDT--EYNVRVLDIANESFALKEKIVEPKLVREVLHSLPRHFDMKLVVIEEANDIATLKLDELFGSLRTFELTFDDKSDKKGKGLAFHTVNDEEPNQ
        M +D+T  EYN RVL+IAN+S  L EKI E K+V +VL SLPR FDMK+  IEEA DI TLKLDELFGSL TFE+   D+  KKGKG+AF ++ D+E N 
Subjt:  MMDDDT--EYNVRVLDIANESFALKEKIVEPKLVREVLHSLPRHFDMKLVVIEEANDIATLKLDELFGSLRTFELTFDDKSDKKGKGLAFHTVNDEEPNQ

Query:  GKDKAVDDNLADSIALLTKQFSKIVWRFHKRPGNYGGQYSKD--HDNYNNATSGMNVVGRQRENEKSKRK
              + N  +SI LLTKQFSK+  +F  +  N GG+  K   HD   N+   +N    +R ++  K+K
Subjt:  GKDKAVDDNLADSIALLTKQFSKIVWRFHKRPGNYGGQYSKD--HDNYNNATSGMNVVGRQRENEKSKRK

TrEMBL top hitse value%identityAlignment
A0A5A7U931 Gag-pol polyprotein6.4e-2849.41Show/hide
Query:  MMDDDT--EYNVRVLDIANESFALKEKIVEPKLVREVLHSLPRHFDMKLVVIEEANDIATLKLDELFGSLRTFELTFDDKSDKKGKGLAFHTVNDEEPNQ
        M +D+T  EYN RVL+IAN+S  L EKI E K+V +VL SLPR FDMK+  IEEA DI TLKLDELFGSL TFE+   D+  KKGKG+AF ++ D+E N 
Subjt:  MMDDDT--EYNVRVLDIANESFALKEKIVEPKLVREVLHSLPRHFDMKLVVIEEANDIATLKLDELFGSLRTFELTFDDKSDKKGKGLAFHTVNDEEPNQ

Query:  GKDKAVDDNLADSIALLTKQFSKIVWRFHKRPGNYGGQYSKD--HDNYNNATSGMNVVGRQRENEKSKRK
              + N  +SI LLTKQFSK+  +F  +  N GG+  K   HD   N+   +N    +R ++  K+K
Subjt:  GKDKAVDDNLADSIALLTKQFSKIVWRFHKRPGNYGGQYSKD--HDNYNNATSGMNVVGRQRENEKSKRK

A0A5A7UMS9 Receptor-like protein 123.3e-3241.87Show/hide
Query:  MMDDDT--EYNVRVLDIANESFALKEKIVEPKLVREVLHSLPRHFDMKLVVIEEANDIATLKLDELFGSLRTFELTFDDKSDKKGKGLAFHTVNDEEPNQ
        M++++T  ++NV+V+D+ NESFAL+EKI E K+V+ V+ SLP  F+MK+  IE+ANDI  +KL ELFGSLRTFEL+FDD S KK  G+AF  + +E    
Subjt:  MMDDDT--EYNVRVLDIANESFALKEKIVEPKLVREVLHSLPRHFDMKLVVIEEANDIATLKLDELFGSLRTFELTFDDKSDKKGKGLAFHTVNDEEPNQ

Query:  GKDKAVDDNLADSIALLTKQFSKIVWRFHKRPGNYGGQYSKDHDNYNNATSGMNVVGRQRENEKSKRKVFLQLFLTESTTSSDNEEDVRALLGCLTNDVV
         +    D+NL + IALL+++F+K   +F+KR  N   Q++++  + + + SG + V       K K          E+T+ SD EE  RAL+ C   +V 
Subjt:  GKDKAVDDNLADSIALLTKQFSKIVWRFHKRPGNYGGQYSKDHDNYNNATSGMNVVGRQRENEKSKRKVFLQLFLTESTTSSDNEEDVRALLGCLTNDVV

Query:  KEV
         E+
Subjt:  KEV

A0A5A7VE51 Gag-proteinase polyprotein1.3e-2836.59Show/hide
Query:  MMDDD--TEYNVRVLDIANESFALKEKIVEPKLVREVLHSLPRHFDMKLVVIEEANDIATLKLDELFGSLRTFELTFDDKSDKKGKGLAFHTVNDEEPNQ
        M +D+  ++YN RVL+I NES  L E+I + K+VR+VL SLP+ FDMK+  IEE +DI TLKLDELFGSL TFE+T  D+  KKGKG+AF +VN  E   
Subjt:  MMDDD--TEYNVRVLDIANESFALKEKIVEPKLVREVLHSLPRHFDMKLVVIEEANDIATLKLDELFGSLRTFELTFDDKSDKKGKGLAFHTVNDEEPNQ

Query:  GKDKAVDDNLADSIALLTKQFSKIVWRFHKRPGNYG------GQYSKDHDN----YNNATSGMNVVGRQRENE----------------KSKRKVFLQLF
          D  ++ N+ +SIALLTKQF+ ++ R  K     G       QY + +DN     NN  S   + G  ++ E                K K+   + L 
Subjt:  GKDKAVDDNLADSIALLTKQFSKIVWRFHKRPGNYG------GQYSKDHDN----YNNATSGMNVVGRQRENE----------------KSKRKVFLQLF

Query:  LTESTTSSDNEEDVRALLGCLTNDVVKEVVISDRLENESKVGVSLVNSSTAGICVDKLYVKWKKDLSVLKQQKDRI
          ES  S D++ ++ A    +T+            EN        + S    + ++KL   WK+D      QK+RI
Subjt:  LTESTTSSDNEEDVRALLGCLTNDVVKEVVISDRLENESKVGVSLVNSSTAGICVDKLYVKWKKDLSVLKQQKDRI

A0A5D3C743 Gag-pol polyprotein8.9e-3048.54Show/hide
Query:  MMDDDTE---YNVRVLDIANESFALKEKIVEPKLVREVLHSLPRHFDMKLVVIEEANDIATLKLDELFGSLRTFELTFDDKSDKKGKGLAFHTVNDEEPN
        MM +D     ++VRVLD+ NES AL   I   KLVR+VL SLP  F MK+VVIEEANDI T+KLDELFGSLRTFEL  +D   KK  G+A   +ND  P 
Subjt:  MMDDDTE---YNVRVLDIANESFALKEKIVEPKLVREVLHSLPRHFDMKLVVIEEANDIATLKLDELFGSLRTFELTFDDKSDKKGKGLAFHTVNDEEPN

Query:  QGKDKAVDDNLADSIALLTKQFSKIVWRFHKRPGNYGGQYSKDHDN---YNNATSGMNVVGRQRENEKSKR
          K++  DDNLA S ALLTKQ SK+  +FHKR  NY    +++ ++     +++       + ++ +KSKR
Subjt:  QGKDKAVDDNLADSIALLTKQFSKIVWRFHKRPGNYGGQYSKDHDN---YNNATSGMNVVGRQRENEKSKR

A0A5D3DCZ8 Gag-pol polyprotein6.4e-2849.41Show/hide
Query:  MMDDDT--EYNVRVLDIANESFALKEKIVEPKLVREVLHSLPRHFDMKLVVIEEANDIATLKLDELFGSLRTFELTFDDKSDKKGKGLAFHTVNDEEPNQ
        M +D+T  EYN RVL+IAN+S  L EKI E K+V +VL SLPR FDMK+  IEEA DI TLKLDELFGSL TFE+   D+  KKGKG+AF ++ D+E N 
Subjt:  MMDDDT--EYNVRVLDIANESFALKEKIVEPKLVREVLHSLPRHFDMKLVVIEEANDIATLKLDELFGSLRTFELTFDDKSDKKGKGLAFHTVNDEEPNQ

Query:  GKDKAVDDNLADSIALLTKQFSKIVWRFHKRPGNYGGQYSKD--HDNYNNATSGMNVVGRQRENEKSKRK
              + N  +SI LLTKQFSK+  +F  +  N GG+  K   HD   N+   +N    +R ++  K+K
Subjt:  GKDKAVDDNLADSIALLTKQFSKIVWRFHKRPGNYGGQYSKD--HDNYNNATSGMNVVGRQRENEKSKRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGATGATGATACTGAGTATAATGTACGAGTTTTGGATATTGCAAACGAGTCGTTTGCTCTTAAAGAAAAGATTGTTGAACCAAAGCTAGTCAGAGAGGTGCTACA
CTCTCTGCCCAGGCACTTCGACATGAAGCTAGTTGTCATTGAAGAGGCAAATGATATTGCCACCTTAAAGTTGGATGAGTTGTTTGGGTCCTTACGCACATTCGAGCTAA
CGTTTGATGACAAGAGTGACAAGAAGGGAAAAGGGTTGGCCTTTCACACTGTGAATGACGAAGAGCCTAATCAGGGTAAGGATAAGGCTGTTGATGATAATTTGGCTGAC
TCTATTGCTCTACTGACTAAACAATTCTCAAAGATTGTGTGGCGATTTCATAAAAGACCTGGTAATTATGGAGGTCAGTATAGCAAAGACCATGACAATTATAATAATGC
TACTTCTGGTATGAATGTGGTAGGCAGACAAAGAGAAAATGAAAAGAGCAAAAGAAAAGTCTTTTTGCAACTCTTTCTGACTGAGTCAACAACAAGTAGTGACAATGAAG
AGGATGTTCGTGCTTTGCTCGGATGTCTTACGAATGATGTTGTTAAAGAGGTTGTGATCTCTGATCGGCTAGAGAATGAATCGAAGGTTGGTGTTTCGCTTGTTAACTCT
TCAACTGCAGGCATATGTGTTGACAAGCTATACGTAAAGTGGAAAAAAGATTTGTCTGTTCTGAAACAACAAAAGGATAGGATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGGATGATGATACTGAGTATAATGTACGAGTTTTGGATATTGCAAACGAGTCGTTTGCTCTTAAAGAAAAGATTGTTGAACCAAAGCTAGTCAGAGAGGTGCTACA
CTCTCTGCCCAGGCACTTCGACATGAAGCTAGTTGTCATTGAAGAGGCAAATGATATTGCCACCTTAAAGTTGGATGAGTTGTTTGGGTCCTTACGCACATTCGAGCTAA
CGTTTGATGACAAGAGTGACAAGAAGGGAAAAGGGTTGGCCTTTCACACTGTGAATGACGAAGAGCCTAATCAGGGTAAGGATAAGGCTGTTGATGATAATTTGGCTGAC
TCTATTGCTCTACTGACTAAACAATTCTCAAAGATTGTGTGGCGATTTCATAAAAGACCTGGTAATTATGGAGGTCAGTATAGCAAAGACCATGACAATTATAATAATGC
TACTTCTGGTATGAATGTGGTAGGCAGACAAAGAGAAAATGAAAAGAGCAAAAGAAAAGTCTTTTTGCAACTCTTTCTGACTGAGTCAACAACAAGTAGTGACAATGAAG
AGGATGTTCGTGCTTTGCTCGGATGTCTTACGAATGATGTTGTTAAAGAGGTTGTGATCTCTGATCGGCTAGAGAATGAATCGAAGGTTGGTGTTTCGCTTGTTAACTCT
TCAACTGCAGGCATATGTGTTGACAAGCTATACGTAAAGTGGAAAAAAGATTTGTCTGTTCTGAAACAACAAAAGGATAGGATTTAG
Protein sequenceShow/hide protein sequence
MMDDDTEYNVRVLDIANESFALKEKIVEPKLVREVLHSLPRHFDMKLVVIEEANDIATLKLDELFGSLRTFELTFDDKSDKKGKGLAFHTVNDEEPNQGKDKAVDDNLAD
SIALLTKQFSKIVWRFHKRPGNYGGQYSKDHDNYNNATSGMNVVGRQRENEKSKRKVFLQLFLTESTTSSDNEEDVRALLGCLTNDVVKEVVISDRLENESKVGVSLVNS
STAGICVDKLYVKWKKDLSVLKQQKDRI