; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0026818 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026818
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionleucine-rich repeat extensin-like protein 3
Genome locationchr06:13300380..13301197
RNA-Seq ExpressionPI0026818
SyntenyPI0026818
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060761.1 formin-like protein 3 [Cucumis melo var. makuwa]4.8e-6591.22Show/hide
Query:  MAPSAAILLSFSFLFHLLLLADSQTSSPISVDLQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPCTPMVSSRPPPPRFIYTTSSPAPPPPRFTYTT
        M  SAAILLSFSFL  LLLLA SQTSSPIS+D QNPDAEIKCGSCPCSNPCIQQLS PPPPPPPPP PCTP VSSRPPPPRFIYT SSPAPPPPRFTYTT
Subjt:  MAPSAAILLSFSFLFHLLLLADSQTSSPISVDLQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPCTPMVSSRPPPPRFIYTTSSPAPPPPRFTYTT

Query:  GVPGNLYEIDANNSWYYFSGTTGKRPGMAAVVVALGCGALHLMGFGKW
        GVPGNLYEIDANNSWYYFSGTTG RPGMAAVVVALGCGALHLMGF KW
Subjt:  GVPGNLYEIDANNSWYYFSGTTGKRPGMAAVVVALGCGALHLMGFGKW

KAE8650628.1 hypothetical protein Csa_011452 [Cucumis sativus]9.7e-6691.28Show/hide
Query:  MKMAPSAAILLSFSFLFHLLLLADSQTSSPISVDLQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPP--PCTPMVSSRPPPPRFIYTTSSPAPPPPRF
        MKMAP AAILLSFSFL HLLLLA+SQTSSPI VD QNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPP  PCTP VSSRPPPPRFIYTTSSPAPPPPRF
Subjt:  MKMAPSAAILLSFSFLFHLLLLADSQTSSPISVDLQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPP--PCTPMVSSRPPPPRFIYTTSSPAPPPPRF

Query:  TYTTGVPGNLYEIDANNSWYYFSGTTGKRPGMAAVVVALGCGALHLMGF
        TYTTGVPGNLYEIDANNSWYYFSGT   RPGMAAV VA+GCGALHLMGF
Subjt:  TYTTGVPGNLYEIDANNSWYYFSGTTGKRPGMAAVVVALGCGALHLMGF

KAE8653002.1 hypothetical protein Csa_004575 [Cucumis sativus]2.2e-5491.47Show/hide
Query:  MKMAPSAAILLSFSFLFHLLLLADSQTSSPISVDLQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPP--PCTPMVSSRPPPPRFIYTTSSPAPPPPRF
        MKMAP AAILLSFSFL HLLLLA+SQTSSPI VD QNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPP  PCTP VSSRPPPPRFIYTTSSPAPPPPRF
Subjt:  MKMAPSAAILLSFSFLFHLLLLADSQTSSPISVDLQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPP--PCTPMVSSRPPPPRFIYTTSSPAPPPPRF

Query:  TYTTGVPGNLYEIDANNSWYYFSGTTGKR
        TYTTGVPGNLYEIDANNSWYYFSGT   R
Subjt:  TYTTGVPGNLYEIDANNSWYYFSGTTGKR

XP_011651408.1 leucine-rich repeat extensin-like protein 3 [Cucumis sativus]1.3e-6790.79Show/hide
Query:  MKMAPSAAILLSFSFLFHLLLLADSQTSSPISVDLQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPP--PCTPMVSSRPPPPRFIYTTSSPAPPPPRF
        MKMAP AAILLSFSFL HLLLLA+SQTSSPI VD QNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPP  PCTP VSSRPPPPRFIYTTSSPAPPPPRF
Subjt:  MKMAPSAAILLSFSFLFHLLLLADSQTSSPISVDLQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPP--PCTPMVSSRPPPPRFIYTTSSPAPPPPRF

Query:  TYTTGVPGNLYEIDANNSWYYFSGTTGKRPGMAAVVVALGCGALHLMGFGKW
        TYTTGVPGNLYEIDANNSWYYFSGT   RPGMAAV VA+GCGALHLMGF KW
Subjt:  TYTTGVPGNLYEIDANNSWYYFSGTTGKRPGMAAVVVALGCGALHLMGFGKW

XP_023528316.1 leucine-rich repeat extensin-like protein 3 [Cucurbita pepo subsp. pepo]8.2e-4974Show/hide
Query:  MKMAPSAAILLSFSFLFHLLLLADSQTSSPISVDLQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPCTPMVSSRPPPPRFIYTTSSPAPPPPRFTY
        MKMAPSAAI LS SFLF  L LADSQ  SP  VD Q+P++EIKCGSCPCSNPC++Q   PPPPPPPPPP C P +   PPPPRFIYT  SP PPPPRF Y
Subjt:  MKMAPSAAILLSFSFLFHLLLLADSQTSSPISVDLQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPCTPMVSSRPPPPRFIYTTSSPAPPPPRFTY

Query:  TTGVPGNLYEIDANNSWYYFSGTTGKRPGMAAVVVALGCGALHLMGFGKW
        TTGVPGNLY+IDANN WYYFSGTT  RP  A +VVALGCGAL+LM FGKW
Subjt:  TTGVPGNLYEIDANNSWYYFSGTTGKRPGMAAVVVALGCGALHLMGFGKW

TrEMBL top hitse value%identityAlignment
A0A0A0L7R0 Uncharacterized protein6.5e-6890.79Show/hide
Query:  MKMAPSAAILLSFSFLFHLLLLADSQTSSPISVDLQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPP--PCTPMVSSRPPPPRFIYTTSSPAPPPPRF
        MKMAP AAILLSFSFL HLLLLA+SQTSSPI VD QNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPP  PCTP VSSRPPPPRFIYTTSSPAPPPPRF
Subjt:  MKMAPSAAILLSFSFLFHLLLLADSQTSSPISVDLQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPP--PCTPMVSSRPPPPRFIYTTSSPAPPPPRF

Query:  TYTTGVPGNLYEIDANNSWYYFSGTTGKRPGMAAVVVALGCGALHLMGFGKW
        TYTTGVPGNLYEIDANNSWYYFSGT   RPGMAAV VA+GCGALHLMGF KW
Subjt:  TYTTGVPGNLYEIDANNSWYYFSGTTGKRPGMAAVVVALGCGALHLMGFGKW

A0A5A7V4T2 Formin-like protein 32.3e-6591.22Show/hide
Query:  MAPSAAILLSFSFLFHLLLLADSQTSSPISVDLQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPCTPMVSSRPPPPRFIYTTSSPAPPPPRFTYTT
        M  SAAILLSFSFL  LLLLA SQTSSPIS+D QNPDAEIKCGSCPCSNPCIQQLS PPPPPPPPP PCTP VSSRPPPPRFIYT SSPAPPPPRFTYTT
Subjt:  MAPSAAILLSFSFLFHLLLLADSQTSSPISVDLQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPCTPMVSSRPPPPRFIYTTSSPAPPPPRFTYTT

Query:  GVPGNLYEIDANNSWYYFSGTTGKRPGMAAVVVALGCGALHLMGFGKW
        GVPGNLYEIDANNSWYYFSGTTG RPGMAAVVVALGCGALHLMGF KW
Subjt:  GVPGNLYEIDANNSWYYFSGTTGKRPGMAAVVVALGCGALHLMGFGKW

A0A5N6QWV0 Uncharacterized protein3.1e-1743.51Show/hide
Query:  APSAAILLSFSFLFHLLLLADS------QTSSPISVDLQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPCTPMVSSRPPPPRFIYTTSSPAPPPPR
        +P   IL+   FLF   + A +      QTS P+  +    D EIKCG+CPC NPC QQL   PPPPPPPPPP  P  +     P   Y T + APPPPR
Subjt:  APSAAILLSFSFLFHLLLLADS------QTSSPISVDLQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPCTPMVSSRPPPPRFIYTTSSPAPPPPR

Query:  FTYTTGVP--GNLYEIDANNSWYYFSGTTGKRPGMAAVVVALGCGALHLMGFGK
        F Y TGVP  G+LY  D  N+W Y+SG       +   ++ +GCG L +M  G+
Subjt:  FTYTTGVP--GNLYEIDANNSWYYFSGTTGKRPGMAAVVVALGCGALHLMGFGK

A0A6J1GAW3 leucine-rich repeat extensin-like protein 25.1e-2858Show/hide
Query:  MAPSAAILLSFSFLFHLLLLADSQTSSPISVDLQNPDAEIKCGSCP-CSNPCIQQLSPPPPPPPPPPPPCTPMVSSRPPPPRFIYTTSSPAPPPPRFTYT
        MAPSAAI LS       LLL+  QTS PIS    +PD EI C S   CSNP +QQL P PP PPPP            PPPRF YTT S  PPP RF YT
Subjt:  MAPSAAILLSFSFLFHLLLLADSQTSSPISVDLQNPDAEIKCGSCP-CSNPCIQQLSPPPPPPPPPPPPCTPMVSSRPPPPRFIYTTSSPAPPPPRFTYT

Query:  TGVPGNLYEIDANNSWYYFSGTTGKRPGMAA-VVVALGCGALHLMGFGKW
        TGVP +LY+ D  N WYYFSG  GK P MAA VVV L CGAL L+ FGKW
Subjt:  TGVPGNLYEIDANNSWYYFSGTTGKRPGMAA-VVVALGCGALHLMGFGKW

A0A6J1J7W0 probable pathogenesis-related protein ARB_028611.6e-4571.62Show/hide
Query:  MAPSAAILLSFSFLFHLLLLADSQTSSPISVDLQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPCTPMVSSRPPPPRFIYTTSSPAPPPPRFTYTT
        MAPSAAI LS SFLF  L LA+SQ  SP  VD Q+P++EIKCGSCPCSNPC++Q    PPPPPPPPP C P +   PPPPRFIYT+ SP PPPPRF YTT
Subjt:  MAPSAAILLSFSFLFHLLLLADSQTSSPISVDLQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPCTPMVSSRPPPPRFIYTTSSPAPPPPRFTYTT

Query:  GVPGNLYEIDANNSWYYFSGTTGKRPGMAAVVVALGCGALHLMGFGKW
        GVPGNLY+IDANN WYYFSGTT      AA+VVALGCGAL+LM FGKW
Subjt:  GVPGNLYEIDANNSWYYFSGTTGKRPGMAAVVVALGCGALHLMGFGKW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02405.1 proline-rich family protein3.9e-0438.61Show/hide
Query:  LLLADSQTSSPISVDLQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPCTPM-VSSRPPPPRFIYTTSSPAPPPPR-------FTYTTGVPGNLYEI
        +L+A    +SPI ++ ++  AE+     PC        + PPPPP PPPP CTP      PPPP+      SP PPPP        FTY    PG+LY I
Subjt:  LLLADSQTSSPISVDLQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPCTPM-VSSRPPPPRFIYTTSSPAPPPPR-------FTYTTGVPGNLYEI

Query:  D
        +
Subjt:  D

AT1G23040.1 hydroxyproline-rich glycoprotein family protein2.6e-0838.1Show/hide
Query:  LADSQTSSPISVDLQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPCTPMVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFS
        L +  +SS  S++ +  D   +     CS  CIQ   PP PPPP PPPP  P   + PPPP    ++  P PPP  F Y TG PGNLY +D       F 
Subjt:  LADSQTSSPISVDLQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPCTPMVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFS

Query:  GTTGKRPGMAAVVVALGCGALHLMGF
           GK      VV   G  A  +M F
Subjt:  GTTGKRPGMAAVVVALGCGALHLMGF

AT1G70990.1 proline-rich family protein5.0e-0437.17Show/hide
Query:  APSAAILLSFSFLFHLLLL--ADSQTSSPISVDLQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPP--CTPMVSSRPPPPRFIYTTSSPAPPPPRFT
        A +A +L +  FL   +++  +DS T+  +  D       IKC       PC+Q + PP PPPP PPPP    P     P PP+  Y      PPP  + 
Subjt:  APSAAILLSFSFLFHLLLL--ADSQTSSPISVDLQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPP--CTPMVSSRPPPPRFIYTTSSPAPPPPRFT

Query:  YTTGVPGNLYEID
        Y TG PG LY ID
Subjt:  YTTGVPGNLYEID

AT3G03350.2 NAD(P)-binding Rossmann-fold superfamily protein1.3e-0741.79Show/hide
Query:  RPPPPRFIY-TTSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSGTTGKRPGMAAVVVALGCGALH
        RPPPPR  Y + SS +PPPP++ Y TGVPG LY  + ++ W Y S           V+V +G G ++
Subjt:  RPPPPRFIY-TTSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSGTTGKRPGMAAVVVALGCGALH

AT3G22800.1 Leucine-rich repeat (LRR) family protein6.6e-0446.38Show/hide
Query:  IKCGSCPCSNPCIQQLSPPPPPPPPPPPPCTPMVSSRPPPPRFIYTTSSPAPP-PPRFTYTTGVPGNLY
        I C S  CS P      PPPPPPPPPPPP  P     PPPP ++Y +  P PP PP + Y    P  +Y
Subjt:  IKCGSCPCSNPCIQQLSPPPPPPPPPPPPCTPMVSSRPPPPRFIYTTSSPAPP-PPRFTYTTGVPGNLY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATGGCGCCTTCCGCCGCCATTTTACTCTCCTTTTCTTTCCTCTTCCACCTCCTTCTTCTCGCCGACTCCCAAACCTCCTCCCCTATATCGGTAGATCTTCAAAA
TCCCGACGCTGAGATCAAATGTGGATCATGCCCTTGTTCCAATCCATGCATTCAACAATTATCGCCTCCCCCGCCCCCGCCACCGCCGCCTCCTCCTCCTTGTACCCCAA
TGGTGTCGTCTCGACCACCGCCTCCTAGGTTTATTTATACCACGTCGTCACCTGCACCACCACCTCCAAGGTTTACTTATACGACCGGTGTTCCCGGTAATTTATACGAG
ATTGATGCGAATAATAGTTGGTATTACTTCTCTGGCACGACGGGGAAGCGACCGGGCATGGCGGCGGTTGTGGTGGCGCTTGGCTGTGGAGCTTTGCATCTAATGGGGTT
TGGTAAGTGGTGA
mRNA sequenceShow/hide mRNA sequence
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAAAAACTCAATCCTCATCGATTTTAGAGCTTTTCCCTTACATGAAAATGGCGCCTTCCGCCGCCATTTTACTCTCCTTTT
CTTTCCTCTTCCACCTCCTTCTTCTCGCCGACTCCCAAACCTCCTCCCCTATATCGGTAGATCTTCAAAATCCCGACGCTGAGATCAAATGTGGATCATGCCCTTGTTCC
AATCCATGCATTCAACAATTATCGCCTCCCCCGCCCCCGCCACCGCCGCCTCCTCCTCCTTGTACCCCAATGGTGTCGTCTCGACCACCGCCTCCTAGGTTTATTTATAC
CACGTCGTCACCTGCACCACCACCTCCAAGGTTTACTTATACGACCGGTGTTCCCGGTAATTTATACGAGATTGATGCGAATAATAGTTGGTATTACTTCTCTGGCACGA
CGGGGAAGCGACCGGGCATGGCGGCGGTTGTGGTGGCGCTTGGCTGTGGAGCTTTGCATCTAATGGGGTTTGGTAAGTGGTGAAAGGATGAATAGCCATATAAAGAAAAT
TAATGTGTTGAATTTGGTCTAATTACTTAAACAAATATTTACTCTTAGTTCATAAAGTATAAATATATATATTATATGATCTTAATTAGATGTTTATTTATTTACCTTTT
TTCAACAAAATTTATTTAGTATTTTCTTTCAATATAATTTTATAGTTACATTTTAGTGTTGATAAGAATATTGAAGGTTACAAATTATTTGTGGTTCATATGTATTGTGA
TGTTGATGGATGCTTATAGAGACATTAATATATATGAAGATTTGTAAA
Protein sequenceShow/hide protein sequence
MKMAPSAAILLSFSFLFHLLLLADSQTSSPISVDLQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPCTPMVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYE
IDANNSWYYFSGTTGKRPGMAAVVVALGCGALHLMGFGKW