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PI0026834 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026834
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr02:4193504..4195224
RNA-Seq ExpressionPI0026834
SyntenyPI0026834
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034017.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.1e-1341.75Show/hide
Query:  QLNINTLKDKDFKKNLESWWTDTNNPGHPGFAFMQRLKQLSNKIRDLQRCTSLRRTETKGKLLVEIDSIDVSETSSPIDQTEGDRRIVLKSELSTLELEE
        +LN   L D +FK+N++ WW  +   GHP FAF+QRLK L+N I+  Q+      T  K  ++ E+D+ID  E  +P+ Q + DRR+ LK+ELS L L+E
Subjt:  QLNINTLKDKDFKKNLESWWTDTNNPGHPGFAFMQRLKQLSNKIRDLQRCTSLRRTETKGKLLVEIDSIDVSETSSPIDQTEGDRRIVLKSELSTLELEE

Query:  ARY
        +++
Subjt:  ARY

KAA0046762.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.2e-1341.75Show/hide
Query:  QLNINTLKDKDFKKNLESWWTDTNNPGHPGFAFMQRLKQLSNKIRDLQRCTSLRRTETKGKLLVEIDSIDVSETSSPIDQTEGDRRIVLKSELSTLELEE
        +LN   L D DFK+N+  WW ++   GHPG++F+QRLK L+N I+  Q+         K  ++ E+DSID  E  +P+ Q E DRR+ LK++LS L L+E
Subjt:  QLNINTLKDKDFKKNLESWWTDTNNPGHPGFAFMQRLKQLSNKIRDLQRCTSLRRTETKGKLLVEIDSIDVSETSSPIDQTEGDRRIVLKSELSTLELEE

Query:  ARY
        +++
Subjt:  ARY

KAA0058104.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.3e-1442.72Show/hide
Query:  QLNINTLKDKDFKKNLESWWTDTNNPGHPGFAFMQRLKQLSNKIRDLQRCTSLRRTETKGKLLVEIDSIDVSETSSPIDQTEGDRRIVLKSELSTLELEE
        +LN  TL D +FK+N+E WW  +   GHPGF+F+QRLK L+N I+  Q+      T  K  ++ E+D+ID +E  +P+ Q E +RR+ LK+EL+ L L+E
Subjt:  QLNINTLKDKDFKKNLESWWTDTNNPGHPGFAFMQRLKQLSNKIRDLQRCTSLRRTETKGKLLVEIDSIDVSETSSPIDQTEGDRRIVLKSELSTLELEE

Query:  ARY
        +++
Subjt:  ARY

KAA0058980.1 uncharacterized protein E6C27_scaffold98G001710 [Cucumis melo var. makuwa]4.3e-1442.72Show/hide
Query:  QLNINTLKDKDFKKNLESWWTDTNNPGHPGFAFMQRLKQLSNKIRDLQRCTSLRRTETKGKLLVEIDSIDVSETSSPIDQTEGDRRIVLKSELSTLELEE
        +LN   L D +FK+N+E WW ++   GHPGF+F+QRLK L+N I+  Q+         K  ++ E+DSID  E  +P+ Q E +RR+ LK+ELS L L+E
Subjt:  QLNINTLKDKDFKKNLESWWTDTNNPGHPGFAFMQRLKQLSNKIRDLQRCTSLRRTETKGKLLVEIDSIDVSETSSPIDQTEGDRRIVLKSELSTLELEE

Query:  ARY
        +++
Subjt:  ARY

TYK05808.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.2e-1342.72Show/hide
Query:  QLNINTLKDKDFKKNLESWWTDTNNPGHPGFAFMQRLKQLSNKIRDLQRCTSLRRTETKGKLLVEIDSIDVSETSSPIDQTEGDRRIVLKSELSTLELEE
        +LN   L D  FK+N+E WW  +   GHPGF+F++RLK L+N I+  Q+      T  K  ++ E+DSID +E  +P+ Q E +RR+ LK+ELS L L+E
Subjt:  QLNINTLKDKDFKKNLESWWTDTNNPGHPGFAFMQRLKQLSNKIRDLQRCTSLRRTETKGKLLVEIDSIDVSETSSPIDQTEGDRRIVLKSELSTLELEE

Query:  ARY
        +++
Subjt:  ARY

TrEMBL top hitse value%identityAlignment
A0A5A7TTK1 LINE-1 retrotransposable element ORF2 protein6.0e-1441.75Show/hide
Query:  QLNINTLKDKDFKKNLESWWTDTNNPGHPGFAFMQRLKQLSNKIRDLQRCTSLRRTETKGKLLVEIDSIDVSETSSPIDQTEGDRRIVLKSELSTLELEE
        +LN   L D DFK+N+  WW ++   GHPG++F+QRLK L+N I+  Q+         K  ++ E+DSID  E  +P+ Q E DRR+ LK++LS L L+E
Subjt:  QLNINTLKDKDFKKNLESWWTDTNNPGHPGFAFMQRLKQLSNKIRDLQRCTSLRRTETKGKLLVEIDSIDVSETSSPIDQTEGDRRIVLKSELSTLELEE

Query:  ARY
        +++
Subjt:  ARY

A0A5A7USG2 LINE-1 retrotransposable element ORF2 protein1.6e-1442.72Show/hide
Query:  QLNINTLKDKDFKKNLESWWTDTNNPGHPGFAFMQRLKQLSNKIRDLQRCTSLRRTETKGKLLVEIDSIDVSETSSPIDQTEGDRRIVLKSELSTLELEE
        +LN  TL D +FK+N+E WW  +   GHPGF+F+QRLK L+N I+  Q+      T  K  ++ E+D+ID +E  +P+ Q E +RR+ LK+EL+ L L+E
Subjt:  QLNINTLKDKDFKKNLESWWTDTNNPGHPGFAFMQRLKQLSNKIRDLQRCTSLRRTETKGKLLVEIDSIDVSETSSPIDQTEGDRRIVLKSELSTLELEE

Query:  ARY
        +++
Subjt:  ARY

A0A5A7UV84 Reverse transcriptase domain-containing protein2.1e-1442.72Show/hide
Query:  QLNINTLKDKDFKKNLESWWTDTNNPGHPGFAFMQRLKQLSNKIRDLQRCTSLRRTETKGKLLVEIDSIDVSETSSPIDQTEGDRRIVLKSELSTLELEE
        +LN   L D +FK+N+E WW ++   GHPGF+F+QRLK L+N I+  Q+         K  ++ E+DSID  E  +P+ Q E +RR+ LK+ELS L L+E
Subjt:  QLNINTLKDKDFKKNLESWWTDTNNPGHPGFAFMQRLKQLSNKIRDLQRCTSLRRTETKGKLLVEIDSIDVSETSSPIDQTEGDRRIVLKSELSTLELEE

Query:  ARY
        +++
Subjt:  ARY

A0A5D3BT10 LINE-1 retrotransposable element ORF2 protein1.0e-1341.75Show/hide
Query:  QLNINTLKDKDFKKNLESWWTDTNNPGHPGFAFMQRLKQLSNKIRDLQRCTSLRRTETKGKLLVEIDSIDVSETSSPIDQTEGDRRIVLKSELSTLELEE
        +LN   L D +FK+N++ WW  +   GHP FAF+QRLK L+N I+  Q+      T  K  ++ E+D+ID  E  +P+ Q + DRR+ LK+ELS L L+E
Subjt:  QLNINTLKDKDFKKNLESWWTDTNNPGHPGFAFMQRLKQLSNKIRDLQRCTSLRRTETKGKLLVEIDSIDVSETSSPIDQTEGDRRIVLKSELSTLELEE

Query:  ARY
        +++
Subjt:  ARY

A0A5D3C3M3 LINE-1 retrotransposable element ORF2 protein6.0e-1442.72Show/hide
Query:  QLNINTLKDKDFKKNLESWWTDTNNPGHPGFAFMQRLKQLSNKIRDLQRCTSLRRTETKGKLLVEIDSIDVSETSSPIDQTEGDRRIVLKSELSTLELEE
        +LN   L D  FK+N+E WW  +   GHPGF+F++RLK L+N I+  Q+      T  K  ++ E+DSID +E  +P+ Q E +RR+ LK+ELS L L+E
Subjt:  QLNINTLKDKDFKKNLESWWTDTNNPGHPGFAFMQRLKQLSNKIRDLQRCTSLRRTETKGKLLVEIDSIDVSETSSPIDQTEGDRRIVLKSELSTLELEE

Query:  ARY
        +++
Subjt:  ARY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAGATCTCTGAGAAAGAAGATCTTTCCTTATCTTCATTTAAAAACCCTGACATTTCCTTTAAATCCGCCTCATGCTCCAGCTAACCAATTAAATGCTGATGTACT
GAAGACAAATGCCATTAAAAGTCCACCAAAGATTTCTCCACCAAAGATCTCTCCACCAAAGAATCCTTCACCAAAGAAAAAAGCCCATCAGAAACAATACAGAGCTAAGA
AGAGACCCAACCCAAGTCTGGAAATTCAGCCTCTACAGATGGTCTTTAATGAATGTGATAAAAATGTCTGCAACTTGACAATGGACTTGGGTATTATTTCCCCTCTTAAT
GATCAAACTGTTGAACCTGCAAGTGGGCAAGAATCTATGAAAAATATTGCTGTCACAAGCCTAGTAGCAATTCTAGAGACCCTTCCTCATTGTCGTGCCCCTCTTCCAAG
GAAATCGAAGAAGTCTTTAATTAAAGCAAATTCCAAAGAGGAACAGCAGGAACAAATTAGACAGGAAGCAGATTCTGAGGAGAGCACAGAATTTAAAAAACAGCTTAATA
TCAACACTTTAAAGGACAAAGACTTCAAGAAGAACTTGGAATCTTGGTGGACAGATACAAACAACCCCGGACATCCTGGTTTTGCTTTTATGCAAAGGCTAAAACAACTC
TCAAATAAAATCAGAGATTTGCAGAGGTGTACTTCTTTGAGAAGAACAGAAACAAAAGGAAAGTTACTTGTAGAAATTGACAGTATTGATGTGTCAGAAACTTCATCTCC
AATTGATCAAACAGAAGGAGATAGAAGAATTGTCCTAAAGTCAGAACTCAGTACATTGGAACTAGAGGAAGCCCGTTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGAGATCTCTGAGAAAGAAGATCTTTCCTTATCTTCATTTAAAAACCCTGACATTTCCTTTAAATCCGCCTCATGCTCCAGCTAACCAATTAAATGCTGATGTACT
GAAGACAAATGCCATTAAAAGTCCACCAAAGATTTCTCCACCAAAGATCTCTCCACCAAAGAATCCTTCACCAAAGAAAAAAGCCCATCAGAAACAATACAGAGCTAAGA
AGAGACCCAACCCAAGTCTGGAAATTCAGCCTCTACAGATGGTCTTTAATGAATGTGATAAAAATGTCTGCAACTTGACAATGGACTTGGGTATTATTTCCCCTCTTAAT
GATCAAACTGTTGAACCTGCAAGTGGGCAAGAATCTATGAAAAATATTGCTGTCACAAGCCTAGTAGCAATTCTAGAGACCCTTCCTCATTGTCGTGCCCCTCTTCCAAG
GAAATCGAAGAAGTCTTTAATTAAAGCAAATTCCAAAGAGGAACAGCAGGAACAAATTAGACAGGAAGCAGATTCTGAGGAGAGCACAGAATTTAAAAAACAGCTTAATA
TCAACACTTTAAAGGACAAAGACTTCAAGAAGAACTTGGAATCTTGGTGGACAGATACAAACAACCCCGGACATCCTGGTTTTGCTTTTATGCAAAGGCTAAAACAACTC
TCAAATAAAATCAGAGATTTGCAGAGGTGTACTTCTTTGAGAAGAACAGAAACAAAAGGAAAGTTACTTGTAGAAATTGACAGTATTGATGTGTCAGAAACTTCATCTCC
AATTGATCAAACAGAAGGAGATAGAAGAATTGTCCTAAAGTCAGAACTCAGTACATTGGAACTAGAGGAAGCCCGTTATTAG
Protein sequenceShow/hide protein sequence
MMRSLRKKIFPYLHLKTLTFPLNPPHAPANQLNADVLKTNAIKSPPKISPPKISPPKNPSPKKKAHQKQYRAKKRPNPSLEIQPLQMVFNECDKNVCNLTMDLGIISPLN
DQTVEPASGQESMKNIAVTSLVAILETLPHCRAPLPRKSKKSLIKANSKEEQQEQIRQEADSEESTEFKKQLNINTLKDKDFKKNLESWWTDTNNPGHPGFAFMQRLKQL
SNKIRDLQRCTSLRRTETKGKLLVEIDSIDVSETSSPIDQTEGDRRIVLKSELSTLELEEARY