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PI0026847 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026847
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr11:23773789..23774422
RNA-Seq ExpressionPI0026847
SyntenyPI0026847
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031678.1 retrotransposon protein [Cucumis melo var. makuwa]1.2e-3369.44Show/hide
Query:  EENSLISGSRRKRGGQHSETVEVIRNAMDFANDQLKAIADWPKEKRATEVELRAEVVKELDDIPELWSRDRVKLLRILFRSVDDTQGFLSIPTEMKLEYC
        E  +  SGS+RKRG +H E VEVI +A +F NDQLK I DWPKEKRATEVELR EVVK+L DIP+L S+DR KL++ILFRSV+  +GFLSIPT++KLEYC
Subjt:  EENSLISGSRRKRGGQHSETVEVIRNAMDFANDQLKAIADWPKEKRATEVELRAEVVKELDDIPELWSRDRVKLLRILFRSVDDTQGFLSIPTEMKLEYC

Query:  NILLEENV
        NILLE NV
Subjt:  NILLEENV

KAA0033290.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.9e-3472.38Show/hide
Query:  EENSLISGSRRKRGGQHSETVEVIRNAMDFANDQLKAIADWPKEKRATEVELRAEVVKELDDIPELWSRDRVKLLRILFRSVDDTQGFLSIPTEMKLEYC
        E  +  SGS+RK+G +H ETVEVI++A++F NDQLKAIA+WPKEKRATEVELRAEV+K+L DIPEL SRDR KL++ILFRSV+  +GFLSIPTE KLEYC
Subjt:  EENSLISGSRRKRGGQHSETVEVIRNAMDFANDQLKAIADWPKEKRATEVELRAEVVKELDDIPELWSRDRVKLLRILFRSVDDTQGFLSIPTEMKLEYC

Query:  NILLE
        NILL+
Subjt:  NILLE

KAA0042340.1 retrotransposon protein [Cucumis melo var. makuwa]5.6e-3168.57Show/hide
Query:  EENSLISGSRRKRGGQHSETVEVIRNAMDFANDQLKAIADWPKEKRATEVELRAEVVKELDDIPELWSRDRVKLLRILFRSVDDTQGFLSIPTEMKLEYC
        E  +  S S+RK+G QH ETVEVIR+AM F NDQLKAIADW KEKRA +VELRA VVK+L DIP+L +RDR K+++ILF SV+  +GFLSIPTE+KLEYC
Subjt:  EENSLISGSRRKRGGQHSETVEVIRNAMDFANDQLKAIADWPKEKRATEVELRAEVVKELDDIPELWSRDRVKLLRILFRSVDDTQGFLSIPTEMKLEYC

Query:  NILLE
        N+LLE
Subjt:  NILLE

KAA0066604.1 retrotransposon protein [Cucumis melo var. makuwa]2.3e-3270.48Show/hide
Query:  EENSLISGSRRKRGGQHSETVEVIRNAMDFANDQLKAIADWPKEKRATEVELRAEVVKELDDIPELWSRDRVKLLRILFRSVDDTQGFLSIPTEMKLEYC
        E  +  SGS+RKRG +H ETVEVIR+AM+F NDQLK IA+WPKEKR TEVELRAEVVK+L +I EL SRDR KL++ILF SV+  +GFLSIP E+KLEYC
Subjt:  EENSLISGSRRKRGGQHSETVEVIRNAMDFANDQLKAIADWPKEKRATEVELRAEVVKELDDIPELWSRDRVKLLRILFRSVDDTQGFLSIPTEMKLEYC

Query:  NILLE
        NILL+
Subjt:  NILLE

XP_008441954.1 PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]1.1e-3166.67Show/hide
Query:  EENSLISGSRRKRGGQHSETVEVIRNAMDFANDQLKAIADWPKEKRATEVELRAEVVKELDDIPELWSRDRVKLLRILFRSVDDTQGFLSIPTEMKLEYC
        E  +  S S+RKRG +  ETVEVIR+ M+F N+QLKAIADWPKEKRA EVE+RA+VVK+L DIP+L S+DR KL++ILFRS++  +GFLSIPTE+KLEYC
Subjt:  EENSLISGSRRKRGGQHSETVEVIRNAMDFANDQLKAIADWPKEKRATEVELRAEVVKELDDIPELWSRDRVKLLRILFRSVDDTQGFLSIPTEMKLEYC

Query:  NILLEENV
        NILL+  V
Subjt:  NILLEENV

TrEMBL top hitse value%identityAlignment
A0A1S3B4L3 uncharacterized protein LOC1034859535.5e-3266.67Show/hide
Query:  EENSLISGSRRKRGGQHSETVEVIRNAMDFANDQLKAIADWPKEKRATEVELRAEVVKELDDIPELWSRDRVKLLRILFRSVDDTQGFLSIPTEMKLEYC
        E  +  S S+RKRG +  ETVEVIR+ M+F N+QLKAIADWPKEKRA EVE+RA+VVK+L DIP+L S+DR KL++ILFRS++  +GFLSIPTE+KLEYC
Subjt:  EENSLISGSRRKRGGQHSETVEVIRNAMDFANDQLKAIADWPKEKRATEVELRAEVVKELDDIPELWSRDRVKLLRILFRSVDDTQGFLSIPTEMKLEYC

Query:  NILLEENV
        NILL+  V
Subjt:  NILLEENV

A0A5A7SQU2 Putative nuclease HARBI19.1e-3572.38Show/hide
Query:  EENSLISGSRRKRGGQHSETVEVIRNAMDFANDQLKAIADWPKEKRATEVELRAEVVKELDDIPELWSRDRVKLLRILFRSVDDTQGFLSIPTEMKLEYC
        E  +  SGS+RK+G +H ETVEVI++A++F NDQLKAIA+WPKEKRATEVELRAEV+K+L DIPEL SRDR KL++ILFRSV+  +GFLSIPTE KLEYC
Subjt:  EENSLISGSRRKRGGQHSETVEVIRNAMDFANDQLKAIADWPKEKRATEVELRAEVVKELDDIPELWSRDRVKLLRILFRSVDDTQGFLSIPTEMKLEYC

Query:  NILLE
        NILL+
Subjt:  NILLE

A0A5A7U0H7 Retrotransposon protein5.5e-3266.67Show/hide
Query:  EENSLISGSRRKRGGQHSETVEVIRNAMDFANDQLKAIADWPKEKRATEVELRAEVVKELDDIPELWSRDRVKLLRILFRSVDDTQGFLSIPTEMKLEYC
        E  +  S S+RKRG +  ETVEVIR+ M+F N+QLKAIADWPKEKRA EVE+RA+VVK+L DIP+L S+DR KL++ILFRS++  +GFLSIPTE+KLEYC
Subjt:  EENSLISGSRRKRGGQHSETVEVIRNAMDFANDQLKAIADWPKEKRATEVELRAEVVKELDDIPELWSRDRVKLLRILFRSVDDTQGFLSIPTEMKLEYC

Query:  NILLEENV
        NILL+  V
Subjt:  NILLEENV

A0A5D3BZU3 Retrotransposon protein5.9e-3469.44Show/hide
Query:  EENSLISGSRRKRGGQHSETVEVIRNAMDFANDQLKAIADWPKEKRATEVELRAEVVKELDDIPELWSRDRVKLLRILFRSVDDTQGFLSIPTEMKLEYC
        E  +  SGS+RKRG +H E VEVI +A +F NDQLK I DWPKEKRATEVELR EVVK+L DIP+L S+DR KL++ILFRSV+  +GFLSIPT++KLEYC
Subjt:  EENSLISGSRRKRGGQHSETVEVIRNAMDFANDQLKAIADWPKEKRATEVELRAEVVKELDDIPELWSRDRVKLLRILFRSVDDTQGFLSIPTEMKLEYC

Query:  NILLEENV
        NILLE NV
Subjt:  NILLEENV

A0A5D3CT52 Retrotransposon protein1.1e-3270.48Show/hide
Query:  EENSLISGSRRKRGGQHSETVEVIRNAMDFANDQLKAIADWPKEKRATEVELRAEVVKELDDIPELWSRDRVKLLRILFRSVDDTQGFLSIPTEMKLEYC
        E  +  SGS+RKRG +H ETVEVIR+AM+F NDQLK IA+WPKEKR TEVELRAEVVK+L +I EL SRDR KL++ILF SV+  +GFLSIP E+KLEYC
Subjt:  EENSLISGSRRKRGGQHSETVEVIRNAMDFANDQLKAIADWPKEKRATEVELRAEVVKELDDIPELWSRDRVKLLRILFRSVDDTQGFLSIPTEMKLEYC

Query:  NILLE
        NILL+
Subjt:  NILLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACTGTAGAATGAAGTGTTTCGCGGAGCTCTGGTTGTGGAGGACTTGCCTCGCGAAGAAGGCAATCTGCGATGAGCTACGCGTTCTGAAGCAGTTTTGCCGCGAAGA
AAATAGTCTTATCAGTGGGAGTAGGAGAAAACGGGGTGGCCAACATAGTGAAACAGTGGAGGTGATCAGGAATGCAATGGACTTTGCAAATGATCAATTGAAGGCAATTG
CGGATTGGCCAAAGGAGAAGCGTGCAACGGAGGTCGAATTGCGTGCTGAAGTCGTGAAAGAACTAGATGATATCCCTGAACTATGGAGTCGAGATAGGGTAAAGCTTCTG
CGAATATTATTCCGTAGTGTTGATGACACACAGGGATTCCTGTCGATCCCAACGGAAATGAAATTGGAGTACTGCAATATTTTGTTGGAAGAAAATGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTACTGTAGAATGAAGTGTTTCGCGGAGCTCTGGTTGTGGAGGACTTGCCTCGCGAAGAAGGCAATCTGCGATGAGCTACGCGTTCTGAAGCAGTTTTGCCGCGAAGA
AAATAGTCTTATCAGTGGGAGTAGGAGAAAACGGGGTGGCCAACATAGTGAAACAGTGGAGGTGATCAGGAATGCAATGGACTTTGCAAATGATCAATTGAAGGCAATTG
CGGATTGGCCAAAGGAGAAGCGTGCAACGGAGGTCGAATTGCGTGCTGAAGTCGTGAAAGAACTAGATGATATCCCTGAACTATGGAGTCGAGATAGGGTAAAGCTTCTG
CGAATATTATTCCGTAGTGTTGATGACACACAGGGATTCCTGTCGATCCCAACGGAAATGAAATTGGAGTACTGCAATATTTTGTTGGAAGAAAATGTTTGA
Protein sequenceShow/hide protein sequence
MYCRMKCFAELWLWRTCLAKKAICDELRVLKQFCREENSLISGSRRKRGGQHSETVEVIRNAMDFANDQLKAIADWPKEKRATEVELRAEVVKELDDIPELWSRDRVKLL
RILFRSVDDTQGFLSIPTEMKLEYCNILLEENV