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PI0026855 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026855
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionHistone deacetylase
Genome locationchr08:18275258..18275785
RNA-Seq ExpressionPI0026855
SyntenyPI0026855
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0030186 - melatonin metabolic process (biological process)
GO:0042548 - regulation of photosynthesis, light reaction (biological process)
GO:0090042 - tubulin deacetylation (biological process)
GO:0070932 - histone H3 deacetylation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0051721 - protein phosphatase 2A binding (molecular function)
GO:0048487 - beta-tubulin binding (molecular function)
GO:0043621 - protein self-association (molecular function)
GO:0043014 - alpha-tubulin binding (molecular function)
GO:0042903 - tubulin deacetylase activity (molecular function)
GO:0032041 - NAD-dependent histone deacetylase activity (H3-K14 specific) (molecular function)
InterPro domainsIPR037138 - Histone deacetylase domain superfamily
IPR023801 - Histone deacetylase domain
IPR023696 - Ureohydrolase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH02459.1 histone deacetylase 14 [Prunus dulcis]2.1e-2865.22Show/hide
Query:  VFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCVFFFWKEVITLGLFRIQWLIRSV-----HFLMSQAWRQS
        VFDE+IVPCAQRFKPDIILVSAGYDAHVLDPLA+LQFTTGTYYMLAS I+QLA +LCEGRCVFF        G + ++ L  SV      FL   +   S
Subjt:  VFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCVFFFWKEVITLGLFRIQWLIRSV-----HFLMSQAWRQS

Query:  LITLQSCMKNHQGSL
        L TL SCMK+HQ  L
Subjt:  LITLQSCMKNHQGSL

KAE8655935.1 Histone deacetylase 14 [Hibiscus syriacus]1.7e-3573.83Show/hide
Query:  VFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCVFFFWKEVITLGLFRIQWLIRSVHFLMSQAWRQSLITLQ
        VFDEVIVPCA+RFKPDIILVSAGYD HVLDPLANLQFTT +YYMLAS IKQLAK+LC GR  +F WKE  T   FRI W  RS HFL++Q W+ SLITL 
Subjt:  VFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCVFFFWKEVITLGLFRIQWLIRSVHFLMSQAWRQSLITLQ

Query:  SCMKNHQ
         CMKNH+
Subjt:  SCMKNHQ

XP_008441062.1 PREDICTED: histone deacetylase 14 isoform X1 [Cucumis melo]3.5e-2898.46Show/hide
Query:  MVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCVFF
        MVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELC GRCVFF
Subjt:  MVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCVFF

XP_038882549.1 histone deacetylase 14 isoform X1 [Benincasa hispida]2.7e-2896.92Show/hide
Query:  MVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCVFF
        MVFDEV+VPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELC+GRCVFF
Subjt:  MVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCVFF

XP_038882550.1 histone deacetylase 14 isoform X2 [Benincasa hispida]2.7e-2896.92Show/hide
Query:  MVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCVFF
        MVFDEV+VPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELC+GRCVFF
Subjt:  MVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCVFF

TrEMBL top hitse value%identityAlignment
A0A1S3B3B9 Histone deacetylase1.7e-2898.46Show/hide
Query:  MVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCVFF
        MVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELC GRCVFF
Subjt:  MVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCVFF

A0A4Y1RDZ2 Histone deacetylase1.0e-2865.22Show/hide
Query:  VFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCVFFFWKEVITLGLFRIQWLIRSV-----HFLMSQAWRQS
        VFDE+IVPCAQRFKPDIILVSAGYDAHVLDPLA+LQFTTGTYYMLAS I+QLA +LCEGRCVFF        G + ++ L  SV      FL   +   S
Subjt:  VFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCVFFFWKEVITLGLFRIQWLIRSV-----HFLMSQAWRQS

Query:  LITLQSCMKNHQGSL
        L TL SCMK+HQ  L
Subjt:  LITLQSCMKNHQGSL

A0A5A7SH99 Histone deacetylase1.7e-2898.46Show/hide
Query:  MVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCVFF
        MVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELC GRCVFF
Subjt:  MVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCVFF

A0A5D3DQ21 Histone deacetylase1.7e-2898.46Show/hide
Query:  MVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCVFF
        MVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELC GRCVFF
Subjt:  MVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCVFF

A0A6A2WIX0 Histone deacetylase8.5e-3673.83Show/hide
Query:  VFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCVFFFWKEVITLGLFRIQWLIRSVHFLMSQAWRQSLITLQ
        VFDEVIVPCA+RFKPDIILVSAGYD HVLDPLANLQFTT +YYMLAS IKQLAK+LC GR  +F WKE  T   FRI W  RS HFL++Q W+ SLITL 
Subjt:  VFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCVFFFWKEVITLGLFRIQWLIRSVHFLMSQAWRQSLITLQ

Query:  SCMKNHQ
         CMKNH+
Subjt:  SCMKNHQ

SwissProt top hitse value%identityAlignment
O30107 Probable deacetylase AF_01306.1e-0739.68Show/hide
Query:  MVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCV
        MV DE+I P    FKP  I +SAG D H  DP+ +L  T   Y  +      +A++ C+GR V
Subjt:  MVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCV

Q20296 Histone deacetylase 63.9e-0642.59Show/hide
Query:  MVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLA
        M F  VI+P A +F PD++L+SAG+DA V DPL   + T  T+ ++   +  LA
Subjt:  MVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLA

Q56195 Acetoin utilization protein AcuC1.8e-0637.33Show/hide
Query:  VFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCVFF------FWKEV
        VF + I P    FKPDII+   G D H LDPL ++  T  T Y +   +K LA    +G+ + F       WK V
Subjt:  VFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCVFF------FWKEV

Q70I53 Histone deacetylase-like amidohydrolase1.0e-0634.43Show/hide
Query:  DEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCVF
        D+V++   + ++P +I+V +G+DA +LDPLA +  T   +  +A      A ++C+GR VF
Subjt:  DEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCVF

Q941D6 Histone deacetylase 142.0e-2685.94Show/hide
Query:  VFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCVFF
        VF+E+IVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTT TYY LA +IK+LAKE+C GRCVFF
Subjt:  VFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCVFF

Arabidopsis top hitse value%identityAlignment
AT3G18520.1 histone deacetylase 151.5e-0537.29Show/hide
Query:  FDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGR
        F  V++P A  F PD +++SAG+DA   DPL     T   Y    S + Q+  +LC G+
Subjt:  FDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGR

AT3G18520.2 histone deacetylase 151.5e-0537.29Show/hide
Query:  FDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGR
        F  V++P A  F PD +++SAG+DA   DPL     T   Y    S + Q+  +LC G+
Subjt:  FDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGR

AT4G33470.1 histone deacetylase 141.4e-2785.94Show/hide
Query:  VFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCVFF
        VF+E+IVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTT TYY LA +IK+LAKE+C GRCVFF
Subjt:  VFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCVFF

AT5G61060.2 histone deacetylase 55.3e-0632.79Show/hide
Query:  FDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCV
        +D +++P A+ F PD+I +SAG+DA + DPL     T   Y ++   +     E  +G+ V
Subjt:  FDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCV

AT5G61070.1 histone deacetylase of the RPD3/HDA1 superfamily 181.2e-0537.74Show/hide
Query:  VFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLA
        V++ +++P  + FKPDIIL+SAG+DA + DPL     T   Y ++   + + A
Subjt:  VFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTTTGATGAAGTAATTGTACCCTGTGCTCAAAGATTTAAGCCAGATATCATTCTTGTCTCTGCTGGGTATGATGCTCATGTGTTAGATCCATTAGCCAATCTGCA
ATTCACGACCGGAACATACTACATGCTCGCATCCAATATTAAACAACTGGCAAAGGAGTTATGCGAGGGTCGATGTGTTTTTTTTTTCTGGAAGGAGGTTATAACCTTGG
GTCTCTTTCGTATTCAGTGGCTGATTCGTTCCGTGCATTTCTTGATGAGCCAAGCTTGGCGTCAGAGTTTGATAACCCTGCAATCTTGTATGAAGAACCATCAAGGAAGT
TTAAGCATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGTTTGATGAAGTAATTGTACCCTGTGCTCAAAGATTTAAGCCAGATATCATTCTTGTCTCTGCTGGGTATGATGCTCATGTGTTAGATCCATTAGCCAATCTGCA
ATTCACGACCGGAACATACTACATGCTCGCATCCAATATTAAACAACTGGCAAAGGAGTTATGCGAGGGTCGATGTGTTTTTTTTTTCTGGAAGGAGGTTATAACCTTGG
GTCTCTTTCGTATTCAGTGGCTGATTCGTTCCGTGCATTTCTTGATGAGCCAAGCTTGGCGTCAGAGTTTGATAACCCTGCAATCTTGTATGAAGAACCATCAAGGAAGT
TTAAGCATGTGA
Protein sequenceShow/hide protein sequence
MVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCEGRCVFFFWKEVITLGLFRIQWLIRSVHFLMSQAWRQSLITLQSCMKNHQGS
LSM