; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0026888 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026888
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pro-like protein
Genome locationchr11:21787922..21788122
RNA-Seq ExpressionPI0026888
SyntenyPI0026888
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058862.1 Gag-pro-like protein [Cucumis melo var. makuwa]1.2e-2080.3Show/hide
Query:  MGKGKVVVDTTQSSNPVQDTDDPIHPLGFTPPYMHVPQSQTTQHYVAVNPLFVVPPPVPDIEQLES
        MGKGKVVVDTTQSSNPVQDTDDPI+  GFTP +M+VPQSQTTQHYVA NP++VVPP VP IE LE+
Subjt:  MGKGKVVVDTTQSSNPVQDTDDPIHPLGFTPPYMHVPQSQTTQHYVAVNPLFVVPPPVPDIEQLES

TYK05098.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]2.4e-2180.3Show/hide
Query:  MGKGKVVVDTTQSSNPVQDTDDPIHPLGFTPPYMHVPQSQTTQHYVAVNPLFVVPPPVPDIEQLES
        MGKGKVVVDTTQSSNPVQDTDDPI+P GFTP +M+VPQSQTTQHYVA +PL++VPP VP IE LE+
Subjt:  MGKGKVVVDTTQSSNPVQDTDDPIHPLGFTPPYMHVPQSQTTQHYVAVNPLFVVPPPVPDIEQLES

TYK23633.1 uncharacterized protein E5676_scaffold4336G00020 [Cucumis melo var. makuwa]5.4e-2178.46Show/hide
Query:  MGKGKVVVDTTQSSNPVQDTDDPIHPLGFTPPYMHVPQSQTTQHYVAVNPLFVVPPPVPDIEQLE
        MGKGKV VDTTQSSNP+QDTDDPI+PLGFTP +M+VPQSQTTQHY+  NP++VVPP VP IE LE
Subjt:  MGKGKVVVDTTQSSNPVQDTDDPIHPLGFTPPYMHVPQSQTTQHYVAVNPLFVVPPPVPDIEQLE

XP_031738551.1 LOW QUALITY PROTEIN: uncharacterized protein LOC101203611 [Cucumis sativus]1.6e-2080Show/hide
Query:  GKGKVVVDTTQSSNPVQDTDDPIHPLGFTPPYMHVPQSQTTQHYVAVNPLFVVPPPVPDIEQLES
        GKGKVVV+T QSSNPVQDTDDPI+P GFTP +M+  QSQT QHYVA+NPLF VPPPVPDIEQLE+
Subjt:  GKGKVVVDTTQSSNPVQDTDDPIHPLGFTPPYMHVPQSQTTQHYVAVNPLFVVPPPVPDIEQLES

XP_031741309.1 LOW QUALITY PROTEIN: uncharacterized protein LOC105435093 [Cucumis sativus]1.6e-2080Show/hide
Query:  GKGKVVVDTTQSSNPVQDTDDPIHPLGFTPPYMHVPQSQTTQHYVAVNPLFVVPPPVPDIEQLES
        GKGKVVV+T QSSNPVQDTDDPI+P GFTP +M+  QSQT QHYVA+NPLF VPPPVPDIEQLE+
Subjt:  GKGKVVVDTTQSSNPVQDTDDPIHPLGFTPPYMHVPQSQTTQHYVAVNPLFVVPPPVPDIEQLES

TrEMBL top hitse value%identityAlignment
A0A5A7TGG5 Putative RNA-directed DNA polymerase7.7e-2178.79Show/hide
Query:  MGKGKVVVDTTQSSNPVQDTDDPIHPLGFTPPYMHVPQSQTTQHYVAVNPLFVVPPPVPDIEQLES
        MGKGKVVVDTTQSSNP+QDTDDPI+P GFTP +M+VPQSQTTQHYV+ N L+ VPP VPDIE LE+
Subjt:  MGKGKVVVDTTQSSNPVQDTDDPIHPLGFTPPYMHVPQSQTTQHYVAVNPLFVVPPPVPDIEQLES

A0A5A7U8Q2 CACTA en-spm transposon protein1.0e-2078.79Show/hide
Query:  MGKGKVVVDTTQSSNPVQDTDDPIHPLGFTPPYMHVPQSQTTQHYVAVNPLFVVPPPVPDIEQLES
        MGKGKVVVDTTQSSN VQDTDDPI+P GFTP +M+VPQSQTTQHYVA +PL++VPP VP IE LE+
Subjt:  MGKGKVVVDTTQSSNPVQDTDDPIHPLGFTPPYMHVPQSQTTQHYVAVNPLFVVPPPVPDIEQLES

A0A5A7USL0 Gag-pro-like protein5.9e-2180.3Show/hide
Query:  MGKGKVVVDTTQSSNPVQDTDDPIHPLGFTPPYMHVPQSQTTQHYVAVNPLFVVPPPVPDIEQLES
        MGKGKVVVDTTQSSNPVQDTDDPI+  GFTP +M+VPQSQTTQHYVA NP++VVPP VP IE LE+
Subjt:  MGKGKVVVDTTQSSNPVQDTDDPIHPLGFTPPYMHVPQSQTTQHYVAVNPLFVVPPPVPDIEQLES

A0A5D3C1F9 CACTA en-spm transposon protein1.2e-2180.3Show/hide
Query:  MGKGKVVVDTTQSSNPVQDTDDPIHPLGFTPPYMHVPQSQTTQHYVAVNPLFVVPPPVPDIEQLES
        MGKGKVVVDTTQSSNPVQDTDDPI+P GFTP +M+VPQSQTTQHYVA +PL++VPP VP IE LE+
Subjt:  MGKGKVVVDTTQSSNPVQDTDDPIHPLGFTPPYMHVPQSQTTQHYVAVNPLFVVPPPVPDIEQLES

A0A5D3DJ57 Retrotrans_gag domain-containing protein2.6e-2178.46Show/hide
Query:  MGKGKVVVDTTQSSNPVQDTDDPIHPLGFTPPYMHVPQSQTTQHYVAVNPLFVVPPPVPDIEQLE
        MGKGKV VDTTQSSNP+QDTDDPI+PLGFTP +M+VPQSQTTQHY+  NP++VVPP VP IE LE
Subjt:  MGKGKVVVDTTQSSNPVQDTDDPIHPLGFTPPYMHVPQSQTTQHYVAVNPLFVVPPPVPDIEQLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAAGGGAAAGTCGTTGTAGATACAACACAATCAAGCAATCCAGTTCAGGACACCGATGATCCCATTCATCCTCTAGGGTTTACGCCACCTTACATGCATGTTCC
ACAGTCTCAAACCACTCAACACTATGTTGCTGTGAATCCACTTTTTGTTGTTCCACCTCCTGTCCCAGATATAGAGCAATTGGAATCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAAAAGGGAAAGTCGTTGTAGATACAACACAATCAAGCAATCCAGTTCAGGACACCGATGATCCCATTCATCCTCTAGGGTTTACGCCACCTTACATGCATGTTCC
ACAGTCTCAAACCACTCAACACTATGTTGCTGTGAATCCACTTTTTGTTGTTCCACCTCCTGTCCCAGATATAGAGCAATTGGAATCATAG
Protein sequenceShow/hide protein sequence
MGKGKVVVDTTQSSNPVQDTDDPIHPLGFTPPYMHVPQSQTTQHYVAVNPLFVVPPPVPDIEQLES