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PI0026890 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026890
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr10:1850136..1850465
RNA-Seq ExpressionPI0026890
SyntenyPI0026890
Gene Ontology termsGO:0006810 - transport (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048374.1 retrotransposon protein [Cucumis melo var. makuwa]1.2e-2553.21Show/hide
Query:  MNKPFPHYDDLCYAFGRDRATGGRAETFVDVGSNVPEGYDGFPAYDGNNMELPTMYSQGLDMSHDDIIGTRPGRFSKGRAGLSGSKRKRGGQAFETVEII
        +NK FPHYD+L Y F +D ATGGRAE+F DVGSN P GYD F A   ++ +   MYS+GL+MS D+++GTR  R S+GR   SGSK+KRGG   ++ +I+
Subjt:  MNKPFPHYDDLCYAFGRDRATGGRAETFVDVGSNVPEGYDGFPAYDGNNMELPTMYSQGLDMSHDDIIGTRPGRFSKGRAGLSGSKRKRGGQAFETVEII

Query:  CSTIEYAND
         + IEY N+
Subjt:  CSTIEYAND

KAA0052074.1 vacuolar protein sorting-associated protein 41-like protein [Cucumis melo var. makuwa]4.2e-2657.8Show/hide
Query:  MNKPFPHYDDLCYAFGRDRATGGRAETFVDVGSNVPEGYDGFPAYDGNNMELPTMYSQGLDMSHDDIIGTRPGRFSKGRAGLSGSKRKRGGQAFETVEII
        +NK FP+YD+L Y FGRDRATG   +TF DVGSN P+GYDGF   DGN  E P++YSQG+D+S DD+  +RP R S+GR   SGSKRKRG Q  E VE I
Subjt:  MNKPFPHYDDLCYAFGRDRATGGRAETFVDVGSNVPEGYDGFPAYDGNNMELPTMYSQGLDMSHDDIIGTRPGRFSKGRAGLSGSKRKRGGQAFETVEII

Query:  CSTIEYAND
           I+  N+
Subjt:  CSTIEYAND

KAA0054147.1 retrotransposon protein [Cucumis melo var. makuwa]7.9e-2555.05Show/hide
Query:  MNKPFPHYDDLCYAFGRDRATGGRAETFVDVGSNVPEGYDGFPAYDGNNMELPTMYSQGLDMSHDDIIGTRPGRFSKGRAGLSGSKRKRGGQAFETVEII
        +NK F HYD+L Y FG+DRATGGRAE+FVD+GSN P GYD F A    +++ P MYS GL+MS DD++ TR  R S+ R   SGSKRKR G A ++ +I+
Subjt:  MNKPFPHYDDLCYAFGRDRATGGRAETFVDVGSNVPEGYDGFPAYDGNNMELPTMYSQGLDMSHDDIIGTRPGRFSKGRAGLSGSKRKRGGQAFETVEII

Query:  CSTIEYAND
         + IEY N+
Subjt:  CSTIEYAND

KAA0056167.1 retrotransposon protein [Cucumis melo var. makuwa]3.3e-3163.3Show/hide
Query:  MNKPFPHYDDLCYAFGRDRATGGRAETFVDVGSNVPEGYDGFPAYDGNNMELPTMYSQGLDMSHDDIIGTRPGRFSKGRAGLSGSKRKRGGQAFETVEII
        +N+ F HYD+LCY FGRD  TGG  ETFV+VGSNV  GY+GF   DGN++E+P+MYSQGLDMS DDI+GTRP + S GR   S SKRK  GQ  ETV+II
Subjt:  MNKPFPHYDDLCYAFGRDRATGGRAETFVDVGSNVPEGYDGFPAYDGNNMELPTMYSQGLDMSHDDIIGTRPGRFSKGRAGLSGSKRKRGGQAFETVEII

Query:  CSTIEYAND
         ++IEY ND
Subjt:  CSTIEYAND

KAA0061395.1 retrotransposon protein [Cucumis melo var. makuwa]1.6e-3062.73Show/hide
Query:  MNKPFPHYDDLCYAFGRDRATGGRAETFVDVGSNVPEGYDGFPAY-DGNNMELPTMYSQGLDMSHDDIIGTRPGRFSKGRAGLSGSKRKRGGQAFETVEI
        +N+ FPHY++LCY FGRD ATGGR ETFVDV SNV   Y+G  +  DGNN+E+PTMYSQGLDMS +DI+GTRP R S  R   S  KRKRGGQ+ E  ++
Subjt:  MNKPFPHYDDLCYAFGRDRATGGRAETFVDVGSNVPEGYDGFPAY-DGNNMELPTMYSQGLDMSHDDIIGTRPGRFSKGRAGLSGSKRKRGGQAFETVEI

Query:  ICSTIEYAND
        ICS +EY ND
Subjt:  ICSTIEYAND

TrEMBL top hitse value%identityAlignment
A0A5A7TZA5 Retrotransposon protein5.9e-2653.21Show/hide
Query:  MNKPFPHYDDLCYAFGRDRATGGRAETFVDVGSNVPEGYDGFPAYDGNNMELPTMYSQGLDMSHDDIIGTRPGRFSKGRAGLSGSKRKRGGQAFETVEII
        +NK FPHYD+L Y F +D ATGGRAE+F DVGSN P GYD F A   ++ +   MYS+GL+MS D+++GTR  R S+GR   SGSK+KRGG   ++ +I+
Subjt:  MNKPFPHYDDLCYAFGRDRATGGRAETFVDVGSNVPEGYDGFPAYDGNNMELPTMYSQGLDMSHDDIIGTRPGRFSKGRAGLSGSKRKRGGQAFETVEII

Query:  CSTIEYAND
         + IEY N+
Subjt:  CSTIEYAND

A0A5A7U9Q0 Vacuolar protein sorting-associated protein 41-like protein2.0e-2657.8Show/hide
Query:  MNKPFPHYDDLCYAFGRDRATGGRAETFVDVGSNVPEGYDGFPAYDGNNMELPTMYSQGLDMSHDDIIGTRPGRFSKGRAGLSGSKRKRGGQAFETVEII
        +NK FP+YD+L Y FGRDRATG   +TF DVGSN P+GYDGF   DGN  E P++YSQG+D+S DD+  +RP R S+GR   SGSKRKRG Q  E VE I
Subjt:  MNKPFPHYDDLCYAFGRDRATGGRAETFVDVGSNVPEGYDGFPAYDGNNMELPTMYSQGLDMSHDDIIGTRPGRFSKGRAGLSGSKRKRGGQAFETVEII

Query:  CSTIEYAND
           I+  N+
Subjt:  CSTIEYAND

A0A5A7UNI7 Retrotransposon protein1.6e-3163.3Show/hide
Query:  MNKPFPHYDDLCYAFGRDRATGGRAETFVDVGSNVPEGYDGFPAYDGNNMELPTMYSQGLDMSHDDIIGTRPGRFSKGRAGLSGSKRKRGGQAFETVEII
        +N+ F HYD+LCY FGRD  TGG  ETFV+VGSNV  GY+GF   DGN++E+P+MYSQGLDMS DDI+GTRP + S GR   S SKRK  GQ  ETV+II
Subjt:  MNKPFPHYDDLCYAFGRDRATGGRAETFVDVGSNVPEGYDGFPAYDGNNMELPTMYSQGLDMSHDDIIGTRPGRFSKGRAGLSGSKRKRGGQAFETVEII

Query:  CSTIEYAND
         ++IEY ND
Subjt:  CSTIEYAND

A0A5A7UWV7 Retrotransposon protein3.8e-2556.88Show/hide
Query:  MNKPFPHYDDLCYAFGRDRATGGRAETFVDVGSNVPEGYDGFPAYDGNNMELPTMYSQGLDMSHDDIIGTRPGRFSKGRAGLSGSKRKRGGQAFETVEII
        +NKPFP+YD+L Y F RDRA G  A+TF DVGSN P GY+GF   DGN  E P +YSQG+DMS DD+  +RP R SKGR G SGSKRKR  Q    VE I
Subjt:  MNKPFPHYDDLCYAFGRDRATGGRAETFVDVGSNVPEGYDGFPAYDGNNMELPTMYSQGLDMSHDDIIGTRPGRFSKGRAGLSGSKRKRGGQAFETVEII

Query:  CSTIEYAND
           ++  N+
Subjt:  CSTIEYAND

A0A5D3CX17 Retrotransposon protein7.9e-3162.73Show/hide
Query:  MNKPFPHYDDLCYAFGRDRATGGRAETFVDVGSNVPEGYDGFPAY-DGNNMELPTMYSQGLDMSHDDIIGTRPGRFSKGRAGLSGSKRKRGGQAFETVEI
        +N+ FPHY++LCY FGRD ATGGR ETFVDV SNV   Y+G  +  DGNN+E+PTMYSQGLDMS +DI+GTRP R S  R   S  KRKRGGQ+ E  ++
Subjt:  MNKPFPHYDDLCYAFGRDRATGGRAETFVDVGSNVPEGYDGFPAY-DGNNMELPTMYSQGLDMSHDDIIGTRPGRFSKGRAGLSGSKRKRGGQAFETVEI

Query:  ICSTIEYAND
        ICS +EY ND
Subjt:  ICSTIEYAND

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAAACCCTTTCCACATTACGACGACCTATGCTACGCATTTGGAAGAGATCGTGCAACAGGAGGTCGCGCTGAAACCTTTGTCGATGTTGGGTCAAATGTGCCTGA
AGGGTACGATGGATTCCCTGCTTATGACGGGAACAATATGGAACTCCCCACGATGTACAGTCAAGGACTGGACATGTCACATGACGACATAATTGGCACACGACCCGGTC
GATTCTCTAAGGGTAGGGCTGGTTTGAGTGGTTCGAAGAGGAAACGGGGAGGGCAGGCATTCGAGACGGTGGAAATTATTTGCAGTACCATAGAATATGCAAATGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACAAACCCTTTCCACATTACGACGACCTATGCTACGCATTTGGAAGAGATCGTGCAACAGGAGGTCGCGCTGAAACCTTTGTCGATGTTGGGTCAAATGTGCCTGA
AGGGTACGATGGATTCCCTGCTTATGACGGGAACAATATGGAACTCCCCACGATGTACAGTCAAGGACTGGACATGTCACATGACGACATAATTGGCACACGACCCGGTC
GATTCTCTAAGGGTAGGGCTGGTTTGAGTGGTTCGAAGAGGAAACGGGGAGGGCAGGCATTCGAGACGGTGGAAATTATTTGCAGTACCATAGAATATGCAAATGACTAG
Protein sequenceShow/hide protein sequence
MNKPFPHYDDLCYAFGRDRATGGRAETFVDVGSNVPEGYDGFPAYDGNNMELPTMYSQGLDMSHDDIIGTRPGRFSKGRAGLSGSKRKRGGQAFETVEIICSTIEYAND