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PI0026901 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026901
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionC2H2-type domain-containing protein
Genome locationchr11:29488745..29489241
RNA-Seq ExpressionPI0026901
SyntenyPI0026901
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651931.1 hypothetical protein Csa_006531, partial [Cucumis sativus]2.6e-4185.98Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKQDRDFQEKAS-DEIYVSHLIVGYRCEKCGCSFDIESSLRSHHCKNK----AMEIEGQEILGENKSLRKRKR
        MDDKSLPYNLRLRKDHKSSSPTEHSKTHK DRDFQEKAS D+IYVSHLIV YRCEKCGCSFDIESSL SHHCKNK    AMEIEG  ILGENKS RK+ R
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKQDRDFQEKAS-DEIYVSHLIVGYRCEKCGCSFDIESSLRSHHCKNK----AMEIEGQEILGENKSLRKRKR

Query:  KGIPRRA
        KG+PRRA
Subjt:  KGIPRRA

KAG6571418.1 hypothetical protein SDJN03_30333, partial [Cucurbita argyrosperma subsp. sororia]3.4e-2562.16Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKQ-DRDFQEKASDEIYVSHLIVGYRCEKCGCSFDIESSLRSHHCKN------KAMEIEGQEILGENKSLRKR
        MDDKS+PYNLRLRKDHK+S+ TE SK  KQ +R+FQEK  +E+     +  Y C+KCGCSFD++ SLRSHHCKN      +AME E +E LG++KSLRKR
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKQ-DRDFQEKASDEIYVSHLIVGYRCEKCGCSFDIESSLRSHHCKN------KAMEIEGQEILGENKSLRKR

Query:  KRKGIPRRAPF
         RKGIP RAPF
Subjt:  KRKGIPRRAPF

KAG7011182.1 hypothetical protein SDJN02_27980, partial [Cucurbita argyrosperma subsp. argyrosperma]9.9e-2561.26Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKQ-DRDFQEKASDEIYVSHLIVGYRCEKCGCSFDIESSLRSHHCKN------KAMEIEGQEILGENKSLRKR
        MD+KS+PYNLRLRKDHK+S+ TE SK  KQ +R+FQEK  +E+     +  Y C+KCGCSFD++ SLRSHHCKN      +AME E +E LG++KSLRKR
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKQ-DRDFQEKASDEIYVSHLIVGYRCEKCGCSFDIESSLRSHHCKN------KAMEIEGQEILGENKSLRKR

Query:  KRKGIPRRAPF
         RKGIP RAPF
Subjt:  KRKGIPRRAPF

XP_022928048.1 uncharacterized protein LOC111434950 [Cucurbita moschata]1.3e-2459.82Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKQ-DRDFQEKASDEIYVSHLIVGYRCEKCGCSFDIESSLRSHHCKN------KAMEIEGQEILGENKSLRKR
        MD+KS+PYNLRLRKDHK+S+ TE SK  KQ +R+FQEK  +E+     +  Y C+KCGCSFD++ SLRSHHCK+      +A E E +E LG++KSLRKR
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKQ-DRDFQEKASDEIYVSHLIVGYRCEKCGCSFDIESSLRSHHCKN------KAMEIEGQEILGENKSLRKR

Query:  KRKGIPRRAPFF
         RKGIP RAPFF
Subjt:  KRKGIPRRAPFF

XP_023511836.1 uncharacterized protein LOC111776737 [Cucurbita pepo subsp. pepo]8.9e-2662.5Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKQ-DRDFQEKASDEIYVSHLIVGYRCEKCGCSFDIESSLRSHHCKN------KAMEIEGQEILGENKSLRKR
        MDDKS+PYNLRLRKDHK+S+ TE SK  KQ +R+FQEK  +E+     +  Y C+KCGCSFD++ SLRSHHCKN      +AME E  E LG++KSLRKR
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKQ-DRDFQEKASDEIYVSHLIVGYRCEKCGCSFDIESSLRSHHCKN------KAMEIEGQEILGENKSLRKR

Query:  KRKGIPRRAPFF
         RKGIP RAPFF
Subjt:  KRKGIPRRAPFF

TrEMBL top hitse value%identityAlignment
A0A0A0LQ06 C2H2-type domain-containing protein4.6e-4486.36Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKQDRDFQEKAS-DEIYVSHLIVGYRCEKCGCSFDIESSLRSHHCKNK----AMEIEGQEILGENKSLRKRKR
        MDDKSLPYNLRLRKDHKSSSPTEHSKTHK DRDFQEKAS D+IYVSHLIV YRCEKCGCSFDIESSL SHHCKNK    AMEIEG  ILGENKS RK+ R
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKQDRDFQEKAS-DEIYVSHLIVGYRCEKCGCSFDIESSLRSHHCKNK----AMEIEGQEILGENKSLRKRKR

Query:  KGIPRRAPFF
        KG+PRRAPFF
Subjt:  KGIPRRAPFF

A0A6J1D739 uncharacterized protein LOC1110179591.5e-1858.12Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSK-THKQDRDFQEKASDEIYVSHLIVGYRCEKCGCSFDIESSLRSHH--CKNKAME--IEGQ---EILGEN----K
        MDDKSLPYNLRLR   K+S+PTE SK   K +RDFQEK  +EI +       RCEKCGC F IE SL SHH  CKNK  E  +E Q   E+L +N    K
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSK-THKQDRDFQEKASDEIYVSHLIVGYRCEKCGCSFDIESSLRSHH--CKNKAME--IEGQ---EILGEN----K

Query:  SLRKRKRKGIPRRAPFF
        S RKR RKGIP RAP F
Subjt:  SLRKRKRKGIPRRAPFF

A0A6J1EMR9 uncharacterized protein LOC1114349506.3e-2559.82Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKQ-DRDFQEKASDEIYVSHLIVGYRCEKCGCSFDIESSLRSHHCKN------KAMEIEGQEILGENKSLRKR
        MD+KS+PYNLRLRKDHK+S+ TE SK  KQ +R+FQEK  +E+     +  Y C+KCGCSFD++ SLRSHHCK+      +A E E +E LG++KSLRKR
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKTHKQ-DRDFQEKASDEIYVSHLIVGYRCEKCGCSFDIESSLRSHHCKN------KAMEIEGQEILGENKSLRKR

Query:  KRKGIPRRAPFF
         RKGIP RAPFF
Subjt:  KRKGIPRRAPFF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGACAAATCTCTTCCTTATAATCTTCGACTTAGGAAAGATCACAAGTCTTCTTCTCCAACCGAACATTCCAAAACTCATAAACAAGACAGAGATTTTCAGGAAAA
GGCAAGTGATGAAATATATGTAAGTCATTTAATTGTGGGTTATCGATGTGAAAAATGTGGATGCTCTTTTGATATTGAATCCTCTCTTCGTTCACACCATTGCAAAAATA
AGGCAATGGAAATTGAAGGGCAGGAAATTTTGGGAGAGAACAAATCATTGAGAAAAAGAAAGAGGAAGGGGATACCAAGAAGAGCACCTTTCTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGACAAATCTCTTCCTTATAATCTTCGACTTAGGAAAGATCACAAGTCTTCTTCTCCAACCGAACATTCCAAAACTCATAAACAAGACAGAGATTTTCAGGAAAA
GGCAAGTGATGAAATATATGTAAGTCATTTAATTGTGGGTTATCGATGTGAAAAATGTGGATGCTCTTTTGATATTGAATCCTCTCTTCGTTCACACCATTGCAAAAATA
AGGCAATGGAAATTGAAGGGCAGGAAATTTTGGGAGAGAACAAATCATTGAGAAAAAGAAAGAGGAAGGGGATACCAAGAAGAGCACCTTTCTTTTAG
Protein sequenceShow/hide protein sequence
MDDKSLPYNLRLRKDHKSSSPTEHSKTHKQDRDFQEKASDEIYVSHLIVGYRCEKCGCSFDIESSLRSHHCKNKAMEIEGQEILGENKSLRKRKRKGIPRRAPFF