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PI0026902 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026902
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr07:11825705..11826549
RNA-Seq ExpressionPI0026902
SyntenyPI0026902
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ERM93404.1 hypothetical protein AMTR_s04947p00003620 [Amborella trichopoda]2.4e-3436.8Show/hide
Query:  AAQEPNAAYMAHDLDRPIRSYTAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQSAGQFGGHPREDPHEHIRSFYSICASFHMSGISPEELRFALFLLT
        A Q  N   +A D  R IR Y AP     NPGI  P   +  +FE+KPVM QM+Q+ GQF G P EDPH H+RSF  +  SF + G+S E LR  LF  +
Subjt:  AAQEPNAAYMAHDLDRPIRSYTAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQSAGQFGGHPREDPHEHIRSFYSICASFHMSGISPEELRFALFLLT

Query:  LRMKRRG--GPMP------WR-------------------------------------MARFKRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFV
        LR + R     +P      W                                        RFK +++ CPH+GIP CI ME FY GLN A++   DA   
Subjt:  LRMKRRG--GPMP------WR-------------------------------------MARFKRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFV

Query:  GGMLKSSYNQIKAMLDTMASNNEEWDEDDFDNRRGGRGRSEEG-MDKNAVVALQGQMIAMNNLLKSMEI
        G +L  SYN+   +L+T+ASNN +W      N R    R   G ++ +A+ AL  QM +M N+LK++ I
Subjt:  GGMLKSSYNQIKAMLDTMASNNEEWDEDDFDNRRGGRGRSEEG-MDKNAVVALQGQMIAMNNLLKSMEI

KAA0062403.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]4.8e-3570.37Show/hide
Query:  NNRNAPPPQAAQEPNAAYMAHDLDRPIRSYTAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQSAGQFGGHPREDPHEHIRSFYSICASFHMSGISPEE
        NN+  P  QAAQ  N  Y+A D DRPIRSY +PNLY+FNPGIAYP F EN RFEIK VMLQ+IQ+AGQF  HPR+DPH++IR+FYSICASFHM GIS EE
Subjt:  NNRNAPPPQAAQEPNAAYMAHDLDRPIRSYTAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQSAGQFGGHPREDPHEHIRSFYSICASFHMSGISPEE

Query:  LRFALFLL
        LRF  F L
Subjt:  LRFALFLL

WP_217833177.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]6.4e-4040.52Show/hide
Query:  NRNAPPPQAAQEPNAAYMAHDLDRPIRSYTAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQSAGQFGGHPREDPHEHIRSFYSICASFHMSGISPEEL
        N NA    A  + N   +AHD +RP+R Y +PNLYNF PGI  P F  N RFE+KPVMLQM+Q+AGQFGG   EDPH H++SF  IC++F M+G+  + +
Subjt:  NRNAPPPQAAQEPNAAYMAHDLDRPIRSYTAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQSAGQFGGHPREDPHEHIRSFYSICASFHMSGISPEEL

Query:  RFALFLLTLRMKRR--------GGPMPW-------------------------------------RMARFKRMVKACPHNGIPECILMEVFYFGLNKATQ
        R  LF  +LR + R        G    W                                        RFKR+V+ CPHNGIP C+ ME+FY GLNK +Q
Subjt:  RFALFLLTLRMKRR--------GGPMPW-------------------------------------RMARFKRMVKACPHNGIPECILMEVFYFGLNKATQ

Query:  QTADAVFVGGMLKSSYNQIKAMLDTMASNNEE
          ADA   GG++  +Y Q K +LD ++ N  +
Subjt:  QTADAVFVGGMLKSSYNQIKAMLDTMASNNEE

XP_030497803.1 uncharacterized protein LOC115713460 [Cannabis sativa]4.0e-3436.43Show/hide
Query:  AAQEPNAAYMAHDLDRPIRSYTAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQSAGQFGGHPREDPHEHIRSFYSICASFHMSGISPEELRFALFLLT
        A  E N   +A D  R IR Y AP     NPGI  P   +   FE+KPVM QM+Q+ GQFGG P EDPH HIRSF  +  SF + G+S E LR  LF  +
Subjt:  AAQEPNAAYMAHDLDRPIRSYTAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQSAGQFGGHPREDPHEHIRSFYSICASFHMSGISPEELRFALFLLT

Query:  LRMKRRG--GPMP------WR-------------------------------------MARFKRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFV
        LR + R     +P      W                                        RFK +++ CPH+GIP CI +E FY GLN A++   DA   
Subjt:  LRMKRRG--GPMP------WR-------------------------------------MARFKRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFV

Query:  GGMLKSSYNQIKAMLDTMASNNEEWDEDDFDNRRGGRGRSEEG-MDKNAVVALQGQMIAMNNLLKSMEI
        G +L  SYN+   +L+ +ASNN +W        R    R   G ++ +A+ AL  QM +M N+LK+M +
Subjt:  GGMLKSSYNQIKAMLDTMASNNEEWDEDDFDNRRGGRGRSEEG-MDKNAVVALQGQMIAMNNLLKSMEI

XP_038887458.1 uncharacterized protein LOC120077591 [Benincasa hispida]9.6e-3635.69Show/hide
Query:  ENNNRNAPP-PQAAQEP--NAAYMAHDLDRPIRSYTAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQSAGQFGGHPREDPHEHIRSFYSICASFHMSG
        +NNN  AP   Q    P  +  ++A D + PIR+Y APNLY+F+PGI+ P+  ENARFEIKPVM+QMIQ+  QF     E+PH H+  F  +C++F + G
Subjt:  ENNNRNAPP-PQAAQEP--NAAYMAHDLDRPIRSYTAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQSAGQFGGHPREDPHEHIRSFYSICASFHMSG

Query:  ISPEELRFALFLLTLRMKRRGGP--------------MPWRM-------------------------------ARFKRMVKACPHNGIPECILMEVFYFG
        I+P  +R  LF  TLR K +                 + W M                                RF+R+VK CPH GI +C+LME+FY G
Subjt:  ISPEELRFALFLLTLRMKRRGGP--------------MPWRM-------------------------------ARFKRMVKACPHNGIPECILMEVFYFG

Query:  LNKATQQTADAVFVGGMLKSSYNQIKAMLDTMASNNEEWDEDDFDNRRGGRGRSEEG-MDKNAVVALQGQMIAMNNLLKSMEI
        LN++TQ  ADA  V   +  +Y + K +LD ++ N ++W +D +  R   R R++   +  N +  L  QM  + +LL+ M +
Subjt:  LNKATQQTADAVFVGGMLKSSYNQIKAMLDTMASNNEEWDEDDFDNRRGGRGRSEEG-MDKNAVVALQGQMIAMNNLLKSMEI

TrEMBL top hitse value%identityAlignment
A0A0A0K6F9 Uncharacterized protein9.1e-3264.55Show/hide
Query:  ARFKRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFVGGMLKSSYNQIKAMLDTMASNNEEWDEDDFDNRRGGRGRSEEGMDKNAVVALQGQMIAM
        +RFKR+VKACP +GIPEC+ MEVFYFGL+K T Q  + +FVGGML+SSYNQIKA LD+M++N++EWD+  F +R   RGR++EG+DK+ VV LQGQMIAM
Subjt:  ARFKRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFVGGMLKSSYNQIKAMLDTMASNNEEWDEDDFDNRRGGRGRSEEGMDKNAVVALQGQMIAM

Query:  NNLLKSMEIT
        NNLL+SM ++
Subjt:  NNLLKSMEIT

A0A5A7UDN8 Uncharacterized protein1.0e-3068.04Show/hide
Query:  NNRNAPPPQAAQEPNAAYMAHDLDRPIRSYTAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQSAGQFGGHPREDPHEHIRSFYSICASFHMSGIS
        NN+N P  Q  QE N AY+AHDLD+PI+SY +PNLY+FNPGIAY  FGEN  FEIK +ML M Q+AGQFGGHP EDP++HIR+FY ICASF+M  IS
Subjt:  NNRNAPPPQAAQEPNAAYMAHDLDRPIRSYTAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQSAGQFGGHPREDPHEHIRSFYSICASFHMSGIS

A0A5A7V1F3 Retrotrans_gag domain-containing protein8.5e-3044.32Show/hide
Query:  PPQAAQEPNAAYMAHDLDRPIRSYTAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQSAGQFGGHPREDPHEHIRSFYSICASF---HMSGISPEELRF
        P   A      Y+AH+L RPIRSY  P+LY FNPGIAYP FGENA +E K    +   S            H  + ++  +   F       I   + R 
Subjt:  PPQAAQEPNAAYMAHDLDRPIRSYTAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQSAGQFGGHPREDPHEHIRSFYSICASF---HMSGISPEELRF

Query:  ALFLLTLRMKRRGGPMPWRMARFKRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFVGGMLKSSYNQIKAMLDTMASNNEE
         L L   R  R+     W +  FKRMVKAC H+GI + +LME FYFGL+K T+Q+AD++F+GG+L+SSYNQIKAMLD+MA+N+++
Subjt:  ALFLLTLRMKRRGGPMPWRMARFKRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFVGGMLKSSYNQIKAMLDTMASNNEE

A0A5A7V2U7 Putative disease resistance RPP13-like protein 12.3e-3570.37Show/hide
Query:  NNRNAPPPQAAQEPNAAYMAHDLDRPIRSYTAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQSAGQFGGHPREDPHEHIRSFYSICASFHMSGISPEE
        NN+  P  QAAQ  N  Y+A D DRPIRSY +PNLY+FNPGIAYP F EN RFEIK VMLQ+IQ+AGQF  HPR+DPH++IR+FYSICASFHM GIS EE
Subjt:  NNRNAPPPQAAQEPNAAYMAHDLDRPIRSYTAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQSAGQFGGHPREDPHEHIRSFYSICASFHMSGISPEE

Query:  LRFALFLL
        LRF  F L
Subjt:  LRFALFLL

U5CUI2 Retrotrans_gag domain-containing protein1.1e-3436.8Show/hide
Query:  AAQEPNAAYMAHDLDRPIRSYTAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQSAGQFGGHPREDPHEHIRSFYSICASFHMSGISPEELRFALFLLT
        A Q  N   +A D  R IR Y AP     NPGI  P   +  +FE+KPVM QM+Q+ GQF G P EDPH H+RSF  +  SF + G+S E LR  LF  +
Subjt:  AAQEPNAAYMAHDLDRPIRSYTAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQSAGQFGGHPREDPHEHIRSFYSICASFHMSGISPEELRFALFLLT

Query:  LRMKRRG--GPMP------WR-------------------------------------MARFKRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFV
        LR + R     +P      W                                        RFK +++ CPH+GIP CI ME FY GLN A++   DA   
Subjt:  LRMKRRG--GPMP------WR-------------------------------------MARFKRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFV

Query:  GGMLKSSYNQIKAMLDTMASNNEEWDEDDFDNRRGGRGRSEEG-MDKNAVVALQGQMIAMNNLLKSMEI
        G +L  SYN+   +L+T+ASNN +W      N R    R   G ++ +A+ AL  QM +M N+LK++ I
Subjt:  GGMLKSSYNQIKAMLDTMASNNEEWDEDDFDNRRGGRGRSEEG-MDKNAVVALQGQMIAMNNLLKSMEI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAACAATAATAGAAATGCCCCTCCACCGCAAGCTGCCCAAGAACCAAACGCCGCCTACATGGCACATGACTTGGACAGGCCAATTAGGTCATATACGGCACCCAA
CCTCTACAACTTCAACCCAGGGATCGCTTACCCTGTGTTCGGTGAAAATGCAAGGTTTGAAATCAAGCCTGTAATGCTTCAAATGATTCAGAGTGCCGGACAATTTGGCG
GTCACCCTAGAGAAGATCCACACGAGCACATTAGAAGTTTCTATTCTATCTGTGCTTCCTTCCATATGTCAGGCATCTCACCTGAAGAACTGAGATTCGCCCTCTTCCTG
TTAACTCTGAGGATGAAGCGAAGAGGTGGGCCAATGCCTTGGAGGATGGCGAGGTTCAAGAGGATGGTTAAAGCATGCCCCCACAATGGCATTCCCGAGTGCATATTGAT
GGAGGTCTTCTATTTTGGTTTGAACAAGGCTACACAGCAGACTGCTGATGCTGTGTTTGTAGGTGGTATGTTAAAAAGCTCCTACAACCAGATTAAGGCAATGCTGGACA
CAATGGCCAGCAATAATGAAGAATGGGATGAAGATGATTTCGACAATCGCCGAGGAGGACGAGGAAGAAGCGAAGAAGGTATGGATAAGAACGCTGTGGTGGCGTTGCAG
GGACAAATGATTGCGATGAACAATCTGCTCAAATCTATGGAAATAACGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAACAATAATAGAAATGCCCCTCCACCGCAAGCTGCCCAAGAACCAAACGCCGCCTACATGGCACATGACTTGGACAGGCCAATTAGGTCATATACGGCACCCAA
CCTCTACAACTTCAACCCAGGGATCGCTTACCCTGTGTTCGGTGAAAATGCAAGGTTTGAAATCAAGCCTGTAATGCTTCAAATGATTCAGAGTGCCGGACAATTTGGCG
GTCACCCTAGAGAAGATCCACACGAGCACATTAGAAGTTTCTATTCTATCTGTGCTTCCTTCCATATGTCAGGCATCTCACCTGAAGAACTGAGATTCGCCCTCTTCCTG
TTAACTCTGAGGATGAAGCGAAGAGGTGGGCCAATGCCTTGGAGGATGGCGAGGTTCAAGAGGATGGTTAAAGCATGCCCCCACAATGGCATTCCCGAGTGCATATTGAT
GGAGGTCTTCTATTTTGGTTTGAACAAGGCTACACAGCAGACTGCTGATGCTGTGTTTGTAGGTGGTATGTTAAAAAGCTCCTACAACCAGATTAAGGCAATGCTGGACA
CAATGGCCAGCAATAATGAAGAATGGGATGAAGATGATTTCGACAATCGCCGAGGAGGACGAGGAAGAAGCGAAGAAGGTATGGATAAGAACGCTGTGGTGGCGTTGCAG
GGACAAATGATTGCGATGAACAATCTGCTCAAATCTATGGAAATAACGTAA
Protein sequenceShow/hide protein sequence
MENNNRNAPPPQAAQEPNAAYMAHDLDRPIRSYTAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQSAGQFGGHPREDPHEHIRSFYSICASFHMSGISPEELRFALFL
LTLRMKRRGGPMPWRMARFKRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFVGGMLKSSYNQIKAMLDTMASNNEEWDEDDFDNRRGGRGRSEEGMDKNAVVALQ
GQMIAMNNLLKSMEIT