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PI0026908 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026908
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr04:19582590..19583361
RNA-Seq ExpressionPI0026908
SyntenyPI0026908
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046851.1 uncharacterized protein E6C27_scaffold19358G00020 [Cucumis melo var. makuwa]1.9e-1279.55Show/hide
Query:  VVLSWVSRTGIGKGVMRKLWRVLWCASIYFIWNERNRRLHGGQA
        V LSW+   GIGKGV RKLWRVLWCA+IYFIWNERN RLHGG+A
Subjt:  VVLSWVSRTGIGKGVMRKLWRVLWCASIYFIWNERNRRLHGGQA

KAA0062333.1 putative reverse transcriptase [Cucumis melo var. makuwa]1.4e-1279.55Show/hide
Query:  VVLSWVSRTGIGKGVMRKLWRVLWCASIYFIWNERNRRLHGGQA
        V LSW+   GIGKGV RKLWRVLWCA+IY+IWNERN RLHGGQA
Subjt:  VVLSWVSRTGIGKGVMRKLWRVLWCASIYFIWNERNRRLHGGQA

KAA0062558.1 uncharacterized protein E6C27_scaffold79G00430 [Cucumis melo var. makuwa]1.1e-1769.23Show/hide
Query:  LFGLVSFGIWRPLTGLGVE-VVLSWVSRTGIGKGVMRKLWRVLWCASIYFIWNERNRRLHGGQAH
        +FGL S+  W PLTGLG+E V LSW+   GI KGV RKLWRVLWC +IYFIW E+N RLHGGQAH
Subjt:  LFGLVSFGIWRPLTGLGVE-VVLSWVSRTGIGKGVMRKLWRVLWCASIYFIWNERNRRLHGGQAH

KAA0065356.1 hypothetical protein E6C27_scaffold17G00040 [Cucumis melo var. makuwa]8.4e-1381.82Show/hide
Query:  VVLSWVSRTGIGKGVMRKLWRVLWCASIYFIWNERNRRLHGGQA
        V LSW+   GIGKGV RKLWRVLWCA+IYFIWNERN RLHGGQA
Subjt:  VVLSWVSRTGIGKGVMRKLWRVLWCASIYFIWNERNRRLHGGQA

TYK26641.1 putative non-LTR retroelement reverse transcriptase [Cucumis melo var. makuwa]6.4e-1381.82Show/hide
Query:  VVLSWVSRTGIGKGVMRKLWRVLWCASIYFIWNERNRRLHGGQA
        V LSW+   GIGKGV RKLWRVLWCA+IYFIWNERN RLHGGQA
Subjt:  VVLSWVSRTGIGKGVMRKLWRVLWCASIYFIWNERNRRLHGGQA

TrEMBL top hitse value%identityAlignment
A0A5A7TZS0 Reverse transcriptase domain-containing protein9.1e-1379.55Show/hide
Query:  VVLSWVSRTGIGKGVMRKLWRVLWCASIYFIWNERNRRLHGGQA
        V LSW+   GIGKGV RKLWRVLWCA+IYFIWNERN RLHGG+A
Subjt:  VVLSWVSRTGIGKGVMRKLWRVLWCASIYFIWNERNRRLHGGQA

A0A5A7V2L9 Putative reverse transcriptase7.0e-1379.55Show/hide
Query:  VVLSWVSRTGIGKGVMRKLWRVLWCASIYFIWNERNRRLHGGQA
        V LSW+   GIGKGV RKLWRVLWCA+IY+IWNERN RLHGGQA
Subjt:  VVLSWVSRTGIGKGVMRKLWRVLWCASIYFIWNERNRRLHGGQA

A0A5A7V4Q6 Uncharacterized protein5.5e-1869.23Show/hide
Query:  LFGLVSFGIWRPLTGLGVE-VVLSWVSRTGIGKGVMRKLWRVLWCASIYFIWNERNRRLHGGQAH
        +FGL S+  W PLTGLG+E V LSW+   GI KGV RKLWRVLWC +IYFIW E+N RLHGGQAH
Subjt:  LFGLVSFGIWRPLTGLGVE-VVLSWVSRTGIGKGVMRKLWRVLWCASIYFIWNERNRRLHGGQAH

A0A5A7VG93 Uncharacterized protein4.1e-1381.82Show/hide
Query:  VVLSWVSRTGIGKGVMRKLWRVLWCASIYFIWNERNRRLHGGQA
        V LSW+   GIGKGV RKLWRVLWCA+IYFIWNERN RLHGGQA
Subjt:  VVLSWVSRTGIGKGVMRKLWRVLWCASIYFIWNERNRRLHGGQA

A0A5D3DSA8 Putative non-LTR retroelement reverse transcriptase3.1e-1381.82Show/hide
Query:  VVLSWVSRTGIGKGVMRKLWRVLWCASIYFIWNERNRRLHGGQA
        V LSW+   GIGKGV RKLWRVLWCA+IYFIWNERN RLHGGQA
Subjt:  VVLSWVSRTGIGKGVMRKLWRVLWCASIYFIWNERNRRLHGGQA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATTTGGTCTCGTATCATTCGGGATATGGCGTCCTCTCACAGGGTTGGGGGTGGAGGTTGTGTTGTCTTGGGTTAGTCGTACGGGTATTGGGAAGGGTGTGATGAG
GAAGCTTTGGCGTGTGCTCTGGTGTGCTTCTATCTACTTTATCTGGAATGAGCGGAATCGCCGTCTCCATGGTGGTCAAGCTCATGGAGGTGCCGATATGCCTGCTAAGG
TCACGATTAGTCTGAGGGGAGTGGAATTTATTGTGCTAGTTACTTATGAGTGGAAACCCTGTAAATATAATTCTTGTCATACGTTTAGACATTCTGTTGGTAAATATCCT
TGGAATGAGGAGGTTCAGGTGCAACAAGAGGCGAGTGTGAGAGAGCCTGCCCCTAGTAAAGGTGCTGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTATTTGGTCTCGTATCATTCGGGATATGGCGTCCTCTCACAGGGTTGGGGGTGGAGGTTGTGTTGTCTTGGGTTAGTCGTACGGGTATTGGGAAGGGTGTGATGAG
GAAGCTTTGGCGTGTGCTCTGGTGTGCTTCTATCTACTTTATCTGGAATGAGCGGAATCGCCGTCTCCATGGTGGTCAAGCTCATGGAGGTGCCGATATGCCTGCTAAGG
TCACGATTAGTCTGAGGGGAGTGGAATTTATTGTGCTAGTTACTTATGAGTGGAAACCCTGTAAATATAATTCTTGTCATACGTTTAGACATTCTGTTGGTAAATATCCT
TGGAATGAGGAGGTTCAGGTGCAACAAGAGGCGAGTGTGAGAGAGCCTGCCCCTAGTAAAGGTGCTGAGTAG
Protein sequenceShow/hide protein sequence
MLFGLVSFGIWRPLTGLGVEVVLSWVSRTGIGKGVMRKLWRVLWCASIYFIWNERNRRLHGGQAHGGADMPAKVTISLRGVEFIVLVTYEWKPCKYNSCHTFRHSVGKYP
WNEEVQVQQEASVREPAPSKGAE