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PI0026928 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026928
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr11:18043486..18044533
RNA-Seq ExpressionPI0026928
SyntenyPI0026928
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031751.1 hypothetical protein E6C27_scaffold506G00140 [Cucumis melo var. makuwa]1.6e-3374.23Show/hide
Query:  KHRTYFEDNRHNLVSSAIPPLSQPKLPKNRGSNVGGKQIRLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVP
        KH TYFEDNRH+LVSS IPP SQP+LPKNRGSN+GGK+IRL+EAMAP  + EVKEH+++SDSS+SDRHWKRPLKKAK SGD   GRG +A+E+P+VP
Subjt:  KHRTYFEDNRHNLVSSAIPPLSQPKLPKNRGSNVGGKQIRLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVP

KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]3.5e-3374.23Show/hide
Query:  KHRTYFEDNRHNLVSSAIPPLSQPKLPKNRGSNVGGKQIRLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVP
        KH TYFEDNRH+LVSSAIPP SQP+LPKNRGSN+GGK+IRL+EAMAP  + EVKE +++SDSS+SDRHWKRPLKKAK SGD   GRG +A+E+P+VP
Subjt:  KHRTYFEDNRHNLVSSAIPPLSQPKLPKNRGSNVGGKQIRLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVP

KAA0054388.1 hypothetical protein E6C27_scaffold24G001310 [Cucumis melo var. makuwa]5.0e-3272.45Show/hide
Query:  MKHRTYFEDNRHNLVSSAIPPLSQPKLPKNRGSNVGGKQIRLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVP
        M+H TYFEDN H+LVSS IPP SQPKL KNRGSN+GGK+IRL+E MA T   E+KEH+++SDSS+SDRHWKRPLKKAK SGDD  GRGS+A  +PNVP
Subjt:  MKHRTYFEDNRHNLVSSAIPPLSQPKLPKNRGSNVGGKQIRLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVP

KAA0055892.1 hypothetical protein E6C27_scaffold438G00100 [Cucumis melo var. makuwa]5.9e-3373.2Show/hide
Query:  KHRTYFEDNRHNLVSSAIPPLSQPKLPKNRGSNVGGKQIRLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVP
        KH TYFEDNRH+LVSS IPP SQP+LPKNRGSN+GGK+IRL+EAMAP  + EVK+H+++SDSS+SDRHWKRPLKKAK SGD   GRG +A+E+P+VP
Subjt:  KHRTYFEDNRHNLVSSAIPPLSQPKLPKNRGSNVGGKQIRLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVP

KAA0057699.1 hypothetical protein E6C27_scaffold126G00510 [Cucumis melo var. makuwa]1.3e-3271.43Show/hide
Query:  MKHRTYFEDNRHNLVSSAIPPLSQPKLPKNRGSNVGGKQIRLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVP
        M+H TYFE+NRH+LVSSAIPP SQP+LPKNRGSN+GGK+IRL+EAMAP  + EV EH+++SDSS+SDRHWKRPLKKAK SGD+  GRG +A+ +P+VP
Subjt:  MKHRTYFEDNRHNLVSSAIPPLSQPKLPKNRGSNVGGKQIRLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVP

TrEMBL top hitse value%identityAlignment
A0A5A7SQC9 PMD domain-containing protein7.6e-3474.23Show/hide
Query:  KHRTYFEDNRHNLVSSAIPPLSQPKLPKNRGSNVGGKQIRLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVP
        KH TYFEDNRH+LVSS IPP SQP+LPKNRGSN+GGK+IRL+EAMAP  + EVKEH+++SDSS+SDRHWKRPLKKAK SGD   GRG +A+E+P+VP
Subjt:  KHRTYFEDNRHNLVSSAIPPLSQPKLPKNRGSNVGGKQIRLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVP

A0A5A7TX42 Uncharacterized protein1.7e-3374.23Show/hide
Query:  KHRTYFEDNRHNLVSSAIPPLSQPKLPKNRGSNVGGKQIRLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVP
        KH TYFEDNRH+LVSSAIPP SQP+LPKNRGSN+GGK+IRL+EAMAP  + EVKE +++SDSS+SDRHWKRPLKKAK SGD   GRG +A+E+P+VP
Subjt:  KHRTYFEDNRHNLVSSAIPPLSQPKLPKNRGSNVGGKQIRLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVP

A0A5A7UJ48 PMD domain-containing protein2.9e-3373.2Show/hide
Query:  KHRTYFEDNRHNLVSSAIPPLSQPKLPKNRGSNVGGKQIRLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVP
        KH TYFEDNRH+LVSS IPP SQP+LPKNRGSN+GGK+IRL+EAMAP  + EVK+H+++SDSS+SDRHWKRPLKKAK SGD   GRG +A+E+P+VP
Subjt:  KHRTYFEDNRHNLVSSAIPPLSQPKLPKNRGSNVGGKQIRLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVP

A0A5A7UVX0 PMD domain-containing protein6.4e-3371.43Show/hide
Query:  MKHRTYFEDNRHNLVSSAIPPLSQPKLPKNRGSNVGGKQIRLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVP
        M+H TYFE+NRH+LVSSAIPP SQP+LPKNRGSN+GGK+IRL+EAMAP  + EV EH+++SDSS+SDRHWKRPLKKAK SGD+  GRG +A+ +P+VP
Subjt:  MKHRTYFEDNRHNLVSSAIPPLSQPKLPKNRGSNVGGKQIRLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVP

A0A5D3BCT1 Uncharacterized protein2.4e-3272.45Show/hide
Query:  MKHRTYFEDNRHNLVSSAIPPLSQPKLPKNRGSNVGGKQIRLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVP
        M+H TYFEDN H+LVSS IPP SQPKL KNRGSN+GGK+IRL+E MA T   E+KEH+++SDSS+SDRHWKRPLKKAK SGDD  GRGS+A  +PNVP
Subjt:  MKHRTYFEDNRHNLVSSAIPPLSQPKLPKNRGSNVGGKQIRLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCATAGGACCTATTTTGAGGATAATAGACACAATTTGGTGAGCAGTGCCATTCCTCCCCTGTCACAACCCAAACTACCCAAGAATCGAGGAAGCAATGTGGGCGG
CAAACAGATCCGCTTGATTGAGGCAATGGCTCCTACCCACGATAGAGAGGTCAAGGAACATAGAGAGCAGAGCGATAGCAGCAGAAGCGACCGTCATTGGAAGAGACCTT
TGAAGAAAGCAAAGGCATCAGGCGATGATTCATGTGGAAGAGGTTCAACTGCTATGGAAATTCCTAATGTTCCAACACCATTGACATCTGCATCAAAGAAGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCATAGGACCTATTTTGAGGATAATAGACACAATTTGGTGAGCAGTGCCATTCCTCCCCTGTCACAACCCAAACTACCCAAGAATCGAGGAAGCAATGTGGGCGG
CAAACAGATCCGCTTGATTGAGGCAATGGCTCCTACCCACGATAGAGAGGTCAAGGAACATAGAGAGCAGAGCGATAGCAGCAGAAGCGACCGTCATTGGAAGAGACCTT
TGAAGAAAGCAAAGGCATCAGGCGATGATTCATGTGGAAGAGGTTCAACTGCTATGGAAATTCCTAATGTTCCAACACCATTGACATCTGCATCAAAGAAGCCTTGA
Protein sequenceShow/hide protein sequence
MKHRTYFEDNRHNLVSSAIPPLSQPKLPKNRGSNVGGKQIRLIEAMAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVPTPLTSASKKP