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PI0026932 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026932
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr11:23772075..23772861
RNA-Seq ExpressionPI0026932
SyntenyPI0026932
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043564.1 retrotransposon protein [Cucumis melo var. makuwa]6.3e-3677.66Show/hide
Query:  WNEEYQCIIVERDLFDNWVKSHPRAKGLLHKSFPYYDDLSYVFGRDRAIGARAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYSQRVNMSPD
        WNE++QCII ERDLFDNWVKSHP A+GLLHKSFPYYDDLSYVF +DRA  AR ETFADVGSNV N FND VPL D +D+DIP MYSQ V++SPD
Subjt:  WNEEYQCIIVERDLFDNWVKSHPRAKGLLHKSFPYYDDLSYVFGRDRAIGARAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYSQRVNMSPD

KAA0062747.1 retrotransposon protein [Cucumis melo var. makuwa]3.1e-4376.15Show/hide
Query:  WNEEYQCIIVERDLFDNWVKSHPRAKGLLHKSFPYYDDLSYVFGRDRAIGARAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYSQRVNMSPDDMVGTR
        WNEE+QCII ERDLFD+WVKSHP  KGLLHKSFPYYDDLSYVFG+DRA GAR+ETF DVGSNVPN FND++PL D HDEDIPTMYSQ V++SPD+M G R
Subjt:  WNEEYQCIIVERDLFDNWVKSHPRAKGLLHKSFPYYDDLSYVFGRDRAIGARAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYSQRVNMSPDDMVGTR

Query:  AGVKHAIHE
        A V  ++ E
Subjt:  AGVKHAIHE

TYK07962.1 retrotransposon protein [Cucumis melo var. makuwa]7.2e-3260.33Show/hide
Query:  WNEEYQCIIVERDLFDNWVKSHPRAKGLLHKSFPYYDDLSYVFGRDRAIGARAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYSQRVNMSPDDMVGTR
        WNEE+QCI+ + + FD+W  SH  AKG LHKSF YYDDL YVF +D+A GA  ETFADVGSN+ N FND VPLDD HD+DIPTMYSQ V+MS D+M GTR
Subjt:  WNEEYQCIIVERDLFDNWVKSHPRAKGLLHKSFPYYDDLSYVFGRDRAIGARAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYSQRVNMSPDDMVGTR

Query:  AG---VKHAIHEECARSIYTQ
              KHA   E    +  Q
Subjt:  AG---VKHAIHEECARSIYTQ

TYK19779.1 retrotransposon protein [Cucumis melo var. makuwa]1.7e-3379.31Show/hide
Query:  WNEEYQCIIVERDLFDNWVKSHPRAKGLLHKSFPYYDDLSYVFGRDRAIGARAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYSQ
        WNE++QCII ERDLFDNWVKSHP A+GLLHKSFPYYDDLSYVF +DRA  AR ETFADVGSNV N FND VPL D +D+DIP MYSQ
Subjt:  WNEEYQCIIVERDLFDNWVKSHPRAKGLLHKSFPYYDDLSYVFGRDRAIGARAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYSQ

XP_008441954.1 PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]2.0e-4279.41Show/hide
Query:  WNEEYQCIIVERDLFDNWVKSHPRAKGLLHKSFPYYDDLSYVFGRDRAIGARAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYSQRVNMSPDDMVGTR
        WNEE+QCII ERDLFD+W+KSHP AKGLLHKSFPYYDDLSYVFG+DRA GAR+ETF +VGSNV N FND++PL D HDEDIPTMYSQ V+MSPD+M G R
Subjt:  WNEEYQCIIVERDLFDNWVKSHPRAKGLLHKSFPYYDDLSYVFGRDRAIGARAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYSQRVNMSPDDMVGTR

Query:  AG
        AG
Subjt:  AG

TrEMBL top hitse value%identityAlignment
A0A1S3B4L3 uncharacterized protein LOC1034859539.8e-4379.41Show/hide
Query:  WNEEYQCIIVERDLFDNWVKSHPRAKGLLHKSFPYYDDLSYVFGRDRAIGARAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYSQRVNMSPDDMVGTR
        WNEE+QCII ERDLFD+W+KSHP AKGLLHKSFPYYDDLSYVFG+DRA GAR+ETF +VGSNV N FND++PL D HDEDIPTMYSQ V+MSPD+M G R
Subjt:  WNEEYQCIIVERDLFDNWVKSHPRAKGLLHKSFPYYDDLSYVFGRDRAIGARAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYSQRVNMSPDDMVGTR

Query:  AG
        AG
Subjt:  AG

A0A5A7TJS2 Retrotransposon protein3.1e-3677.66Show/hide
Query:  WNEEYQCIIVERDLFDNWVKSHPRAKGLLHKSFPYYDDLSYVFGRDRAIGARAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYSQRVNMSPD
        WNE++QCII ERDLFDNWVKSHP A+GLLHKSFPYYDDLSYVF +DRA  AR ETFADVGSNV N FND VPL D +D+DIP MYSQ V++SPD
Subjt:  WNEEYQCIIVERDLFDNWVKSHPRAKGLLHKSFPYYDDLSYVFGRDRAIGARAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYSQRVNMSPD

A0A5A7U0H7 Retrotransposon protein9.8e-4379.41Show/hide
Query:  WNEEYQCIIVERDLFDNWVKSHPRAKGLLHKSFPYYDDLSYVFGRDRAIGARAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYSQRVNMSPDDMVGTR
        WNEE+QCII ERDLFD+W+KSHP AKGLLHKSFPYYDDLSYVFG+DRA GAR+ETF +VGSNV N FND++PL D HDEDIPTMYSQ V+MSPD+M G R
Subjt:  WNEEYQCIIVERDLFDNWVKSHPRAKGLLHKSFPYYDDLSYVFGRDRAIGARAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYSQRVNMSPDDMVGTR

Query:  AG
        AG
Subjt:  AG

A0A5D3D8J6 Retrotransposon protein8.3e-3479.31Show/hide
Query:  WNEEYQCIIVERDLFDNWVKSHPRAKGLLHKSFPYYDDLSYVFGRDRAIGARAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYSQ
        WNE++QCII ERDLFDNWVKSHP A+GLLHKSFPYYDDLSYVF +DRA  AR ETFADVGSNV N FND VPL D +D+DIP MYSQ
Subjt:  WNEEYQCIIVERDLFDNWVKSHPRAKGLLHKSFPYYDDLSYVFGRDRAIGARAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYSQ

A0A5D3DG22 Retrotransposon protein1.5e-4376.15Show/hide
Query:  WNEEYQCIIVERDLFDNWVKSHPRAKGLLHKSFPYYDDLSYVFGRDRAIGARAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYSQRVNMSPDDMVGTR
        WNEE+QCII ERDLFD+WVKSHP  KGLLHKSFPYYDDLSYVFG+DRA GAR+ETF DVGSNVPN FND++PL D HDEDIPTMYSQ V++SPD+M G R
Subjt:  WNEEYQCIIVERDLFDNWVKSHPRAKGLLHKSFPYYDDLSYVFGRDRAIGARAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYSQRVNMSPDDMVGTR

Query:  AGVKHAIHE
        A V  ++ E
Subjt:  AGVKHAIHE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G24960.2 unknown protein2.3e-0426Show/hide
Query:  WNEEYQCIIVERDLFDNWVKSHPRAKGLLHKSFPYYDDLSYVFGRDRAIG
        W+     +I + D+++ ++++HP A+    K+ P Y +L ++FG++ + G
Subjt:  WNEEYQCIIVERDLFDNWVKSHPRAKGLLHKSFPYYDDLSYVFGRDRAIG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGAATGAAGAATATCAGTGCATCATTGTGGAACGCGACTTGTTTGATAATTGGGTCAAGAGTCATCCTAGGGCGAAAGGACTGTTACACAAATCATTTCCATATTA
TGACGATTTGTCGTACGTGTTCGGCAGAGATCGGGCAATAGGAGCACGTGCGGAGACGTTTGCTGACGTGGGATCTAATGTGCCAAACAGTTTCAACGACAGTGTTCCAC
TTGATGATCTACATGACGAAGACATCCCGACGATGTATAGCCAAAGGGTGAATATGTCCCCAGATGACATGGTAGGAACACGTGCAGGTGTGAAACATGCGATTCATGAG
GAATGTGCGAGATCAATTTACACGCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGAATGAAGAATATCAGTGCATCATTGTGGAACGCGACTTGTTTGATAATTGGGTCAAGAGTCATCCTAGGGCGAAAGGACTGTTACACAAATCATTTCCATATTA
TGACGATTTGTCGTACGTGTTCGGCAGAGATCGGGCAATAGGAGCACGTGCGGAGACGTTTGCTGACGTGGGATCTAATGTGCCAAACAGTTTCAACGACAGTGTTCCAC
TTGATGATCTACATGACGAAGACATCCCGACGATGTATAGCCAAAGGGTGAATATGTCCCCAGATGACATGGTAGGAACACGTGCAGGTGTGAAACATGCGATTCATGAG
GAATGTGCGAGATCAATTTACACGCAATGA
Protein sequenceShow/hide protein sequence
MWNEEYQCIIVERDLFDNWVKSHPRAKGLLHKSFPYYDDLSYVFGRDRAIGARAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYSQRVNMSPDDMVGTRAGVKHAIHE
ECARSIYTQ