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PI0026943 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026943
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionC2H2-type domain-containing protein
Genome locationchr04:18783867..18784403
RNA-Seq ExpressionPI0026943
SyntenyPI0026943
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066236.1 protein LATE FLOWERING-like [Cucumis melo var. makuwa]6.9e-7996.71Show/hide
Query:  MEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPSPTSLVFAASQQQHHP-GLLPHPVYIATHGANLHCFPNNQQLLY
        MEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPF +PTSLVFAASQQQHHP GLLPHPVYIATHGANLHCFPNNQQLLY
Subjt:  MEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPSPTSLVFAASQQQHHP-GLLPHPVYIATHGANLHCFPNNQQLLY

Query:  ENMVFCGGVCSSNRYHQDEENLFNWERNIKKDLSRINHDKEKEQKLDLSLHL
        ENMVFCGGVCSSNRYHQDEENL NWERNIK DLSRINHDKEKEQKLDLSLHL
Subjt:  ENMVFCGGVCSSNRYHQDEENLFNWERNIKKDLSRINHDKEKEQKLDLSLHL

KAE8650843.1 hypothetical protein Csa_017433, partial [Cucumis sativus]1.2e-5995.16Show/hide
Query:  MEYEESLAKVVEIETNSNNNIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPSPTSLVFAASQQQHHPG
        MEYEESL+KVVEIETN +NNIVEKV+EMEE PSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFP+PTSLVFAASQQQHHPG
Subjt:  MEYEESLAKVVEIETNSNNNIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPSPTSLVFAASQQQHHPG

Query:  LLPHPVYIATHGANLHCFPNNQQL
        LLPHPVYIATHGANLHCFPNNQQL
Subjt:  LLPHPVYIATHGANLHCFPNNQQL

XP_008447640.1 PREDICTED: protein LATE FLOWERING-like [Cucumis melo]1.8e-9095.53Show/hide
Query:  MEYEESLAKVVEIETNSNNNIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPSPTSLVFAASQQQHHP-
        MEYEESL+KVVEIETN NN+IVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPF +PTSLVFAASQQQHHP 
Subjt:  MEYEESLAKVVEIETNSNNNIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPSPTSLVFAASQQQHHP-

Query:  GLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQDEENLFNWERNIKKDLSRINHDKEKEQKLDLSLHL
        GLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQDEENL NWERNIK DLSRINHDKEKEQKLDLSLHL
Subjt:  GLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQDEENLFNWERNIKKDLSRINHDKEKEQKLDLSLHL

XP_031739318.1 protein LATE FLOWERING [Cucumis sativus]7.1e-9295.51Show/hide
Query:  MEYEESLAKVVEIETNSNNNIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPSPTSLVFAASQQQHHPG
        MEYEESL+KVVEIETN +NNIVEKV+EMEE PSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFP+PTSLVFAASQQQHHPG
Subjt:  MEYEESLAKVVEIETNSNNNIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPSPTSLVFAASQQQHHPG

Query:  LLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQDEENLFNWERNIKKDLSRINHDKEKEQKLDLSLHL
        LLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVC SNRYHQDEENL NWERNIKKDLSRINHDKEKEQKLDLSLHL
Subjt:  LLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQDEENLFNWERNIKKDLSRINHDKEKEQKLDLSLHL

XP_038888938.1 protein LATE FLOWERING [Benincasa hispida]1.1e-7682.61Show/hide
Query:  MEYEESLAKVVEIETNSNNNIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSV---SPPSPFPSPTSLVFAASQQQH
        MEYEE L++V E    +NNNIV    EMEETP+RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI DYS    SPPSPFP+P SLVF AS QQH
Subjt:  MEYEESLAKVVEIETNSNNNIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSV---SPPSPFPSPTSLVFAASQQQH

Query:  HPGLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQ---DEENLFNWERNIKKDLSRINHDKEKEQKLDLSLHL
        HPGLLP PVYIATHG NLHCFPNNQQLLYENMV+CGGVC+SNRYHQ   DEENL NWER+IKKDLSRINHDKEKEQKLDLSLHL
Subjt:  HPGLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQ---DEENLFNWERNIKKDLSRINHDKEKEQKLDLSLHL

TrEMBL top hitse value%identityAlignment
A0A0A0LE19 C2H2-type domain-containing protein6.1e-8197.35Show/hide
Query:  MEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPSPTSLVFAASQQQHHPGLLPHPVYIATHGANLHCFPNNQQLLYE
        MEE PSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFP+PTSLVFAASQQQHHPGLLPHPVYIATHGANLHCFPNNQQLLYE
Subjt:  MEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPSPTSLVFAASQQQHHPGLLPHPVYIATHGANLHCFPNNQQLLYE

Query:  NMVFCGGVCSSNRYHQDEENLFNWERNIKKDLSRINHDKEKEQKLDLSLHL
        NMVFCGGVC SNRYHQDEENL NWERNIKKDLSRINHDKEKEQKLDLSLHL
Subjt:  NMVFCGGVCSSNRYHQDEENLFNWERNIKKDLSRINHDKEKEQKLDLSLHL

A0A1S3BIU8 protein LATE FLOWERING-like8.5e-9195.53Show/hide
Query:  MEYEESLAKVVEIETNSNNNIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPSPTSLVFAASQQQHHP-
        MEYEESL+KVVEIETN NN+IVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPF +PTSLVFAASQQQHHP 
Subjt:  MEYEESLAKVVEIETNSNNNIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPSPTSLVFAASQQQHHP-

Query:  GLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQDEENLFNWERNIKKDLSRINHDKEKEQKLDLSLHL
        GLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQDEENL NWERNIK DLSRINHDKEKEQKLDLSLHL
Subjt:  GLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQDEENLFNWERNIKKDLSRINHDKEKEQKLDLSLHL

A0A5A7VIQ7 Protein LATE FLOWERING-like3.4e-7996.71Show/hide
Query:  MEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPSPTSLVFAASQQQHHP-GLLPHPVYIATHGANLHCFPNNQQLLY
        MEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPF +PTSLVFAASQQQHHP GLLPHPVYIATHGANLHCFPNNQQLLY
Subjt:  MEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPSPTSLVFAASQQQHHP-GLLPHPVYIATHGANLHCFPNNQQLLY

Query:  ENMVFCGGVCSSNRYHQDEENLFNWERNIKKDLSRINHDKEKEQKLDLSLHL
        ENMVFCGGVCSSNRYHQDEENL NWERNIK DLSRINHDKEKEQKLDLSLHL
Subjt:  ENMVFCGGVCSSNRYHQDEENLFNWERNIKKDLSRINHDKEKEQKLDLSLHL

A0A6J1ETH7 protein LATE FLOWERING1.0e-5161.38Show/hide
Query:  MEYEESLAKVVEIETNSNNNIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPSPTSLVFAASQQQHHPG
        ME EE   +V E  +          +EMEETPSR+FPCLFCSRKFQ+SQALGGHQNAHKKERTA RKAKR+ DYS S  S   S    VFA +QQ HHP 
Subjt:  MEYEESLAKVVEIETNSNNNIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPSPTSLVFAASQQQHHPG

Query:  LLPHPVYIATHGANLHCFPNNQQLLY---------ENMVFCGGVCSSNRYH--QDEENLFNWERNIKKDLSRINHDKEKEQKLDLSLHL
        +LPHPVYIA HGANLHCFPNNQQ+ Y         E+MV+ GGVCS NRY   +DE+++ NW+R+IKK       DKEKEQKLDLSLHL
Subjt:  LLPHPVYIATHGANLHCFPNNQQLLY---------ENMVFCGGVCSSNRYH--QDEENLFNWERNIKKDLSRINHDKEKEQKLDLSLHL

A0A6J1HVN7 protein LATE FLOWERING-like1.5e-5069.38Show/hide
Query:  MEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVS-PPSPFPSPTSLVFAASQQQ-HHPGLLPHPVYIATHGANLHCFPNNQQLL
        MEE PSR+FPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI DY+ S  PSP  S +S VFAA+  Q HHPGL PHP+YIA + ANLHCFPNN  L 
Subjt:  MEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVS-PPSPFPSPTSLVFAASQQQ-HHPGLLPHPVYIATHGANLHCFPNNQQLL

Query:  YENMVFCGGVCSSNRYH-------QDEENLFNWERNIKKDLSRINHDKEKEQKLDLSLHL
        YE+M + GGVCSSNRYH       +DE+N+ NW+RNIK       +DK+KEQKLDLSLHL
Subjt:  YENMVFCGGVCSSNRYH-------QDEENLFNWERNIKKDLSRINHDKEKEQKLDLSLHL

SwissProt top hitse value%identityAlignment
Q39261 Zinc finger protein 23.0e-0857.41Show/hide
Query:  RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPSPTS
        RVF C +C RKF SSQALGGHQNAHK ERT A+K++ +   S +  S  P P S
Subjt:  RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPSPTS

Q39263 Zinc finger protein 46.0e-0943.66Show/hide
Query:  MEYEESLAKVVEIETNSNNNIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI
        ++ E S   +    T+ ++N  ++  +      RVF C +C RKF SSQALGGHQNAHK+ERT A++A R+
Subjt:  MEYEESLAKVVEIETNSNNNIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI

Q39266 Zinc finger protein 73.0e-0841.49Show/hide
Query:  VEIETNSNNNIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPSPTSLVFAASQQQHHPGLLPH
        ++++ N   N   K  + E  P RVF C +C RKF SSQALGGHQNAHK+ERT A++A  +         P+   +S    +   Q H GLL H
Subjt:  VEIETNSNNNIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPSPTSLVFAASQQQHHPGLLPH

Q9FFX4 Zinc finger protein KNUCKLES3.9e-0873.53Show/hide
Query:  RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARK
        R+FPC +C RKF +SQALGGHQNAHK+ER AAR+
Subjt:  RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARK

Q9FKA9 Protein LATE FLOWERING3.2e-1838.25Show/hide
Query:  VEIETNSNNNIVEKVLEMEETPS--RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPSPTSLVFAASQQQHHPGLLPHPVYI
        VE+E        ++  + +E  S  R+FPCLFCSRKF SSQALGGHQNAHKKERTAAR+AKR  D+  +       P   VF +S  QHH  +L +P   
Subjt:  VEIETNSNNNIVEKVLEMEETPS--RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPSPTSLVFAASQQQHHPGLLPHPVYI

Query:  ATHGANLHCFPNNQQLLYENMVF-------------CGGVCSSNRYHQDEENLFNWERNIKKDLSRINHDKEKEQKLDLSLHL
            A++ CFP       ++ +F              G  C      Q   ++ +   N+      +N DK K+Q LDLSLHL
Subjt:  ATHGANLHCFPNNQQLLYENMVF-------------CGGVCSSNRYHQDEENLFNWERNIKKDLSRINHDKEKEQKLDLSLHL

Arabidopsis top hitse value%identityAlignment
AT1G24625.1 zinc finger protein 72.1e-0941.49Show/hide
Query:  VEIETNSNNNIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPSPTSLVFAASQQQHHPGLLPH
        ++++ N   N   K  + E  P RVF C +C RKF SSQALGGHQNAHK+ERT A++A  +         P+   +S    +   Q H GLL H
Subjt:  VEIETNSNNNIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPSPTSLVFAASQQQHHPGLLPH

AT1G66140.1 zinc finger protein 44.3e-1043.66Show/hide
Query:  MEYEESLAKVVEIETNSNNNIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI
        ++ E S   +    T+ ++N  ++  +      RVF C +C RKF SSQALGGHQNAHK+ERT A++A R+
Subjt:  MEYEESLAKVVEIETNSNNNIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI

AT5G01860.1 C2H2 and C2HC zinc fingers superfamily protein1.5e-1046.15Show/hide
Query:  ETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI-CDY-SVSPPSPFPSPTSLVFAASQQQHHPGLLPHP
        E  +RVF C FC ++F +SQALGGHQNAHK+ER+ A++ K I  +Y  +S  S +P P+ L F++S  Q+  G+  +P
Subjt:  ETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI-CDY-SVSPPSPFPSPTSLVFAASQQQHHPGLLPHP

AT5G48890.1 C2H2-like zinc finger protein2.3e-1938.25Show/hide
Query:  VEIETNSNNNIVEKVLEMEETPS--RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPSPTSLVFAASQQQHHPGLLPHPVYI
        VE+E        ++  + +E  S  R+FPCLFCSRKF SSQALGGHQNAHKKERTAAR+AKR  D+  +       P   VF +S  QHH  +L +P   
Subjt:  VEIETNSNNNIVEKVLEMEETPS--RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPSPTSLVFAASQQQHHPGLLPHPVYI

Query:  ATHGANLHCFPNNQQLLYENMVF-------------CGGVCSSNRYHQDEENLFNWERNIKKDLSRINHDKEKEQKLDLSLHL
            A++ CFP       ++ +F              G  C      Q   ++ +   N+      +N DK K+Q LDLSLHL
Subjt:  ATHGANLHCFPNNQQLLYENMVF-------------CGGVCSSNRYHQDEENLFNWERNIKKDLSRINHDKEKEQKLDLSLHL

AT5G57520.1 zinc finger protein 22.1e-0957.41Show/hide
Query:  RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPSPTS
        RVF C +C RKF SSQALGGHQNAHK ERT A+K++ +   S +  S  P P S
Subjt:  RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPSPTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATATGAAGAAAGCCTTGCAAAAGTAGTTGAAATTGAAACCAACAGCAACAACAATATTGTTGAAAAAGTACTTGAAATGGAAGAAACCCCATCAAGAGTTTTCCC
CTGTTTGTTCTGTTCAAGAAAGTTTCAAAGCTCCCAAGCTTTAGGAGGCCATCAAAATGCTCATAAGAAAGAGAGGACTGCCGCGAGGAAAGCCAAGCGAATCTGCGATT
ACTCAGTGTCGCCACCATCGCCGTTCCCGTCACCGACATCGTTGGTTTTTGCAGCTAGCCAGCAGCAACATCATCCAGGGCTATTGCCACATCCTGTTTATATTGCTACT
CATGGAGCTAATCTTCATTGTTTCCCTAATAACCAACAATTGTTATATGAAAACATGGTTTTTTGTGGTGGGGTTTGTTCAAGCAATAGATATCATCAAGATGAAGAAAA
TTTGTTCAATTGGGAGAGAAACATAAAGAAAGATCTTAGTAGGATAAATCATGATAAGGAAAAAGAGCAAAAACTTGATCTTTCTCTCCATTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAATATGAAGAAAGCCTTGCAAAAGTAGTTGAAATTGAAACCAACAGCAACAACAATATTGTTGAAAAAGTACTTGAAATGGAAGAAACCCCATCAAGAGTTTTCCC
CTGTTTGTTCTGTTCAAGAAAGTTTCAAAGCTCCCAAGCTTTAGGAGGCCATCAAAATGCTCATAAGAAAGAGAGGACTGCCGCGAGGAAAGCCAAGCGAATCTGCGATT
ACTCAGTGTCGCCACCATCGCCGTTCCCGTCACCGACATCGTTGGTTTTTGCAGCTAGCCAGCAGCAACATCATCCAGGGCTATTGCCACATCCTGTTTATATTGCTACT
CATGGAGCTAATCTTCATTGTTTCCCTAATAACCAACAATTGTTATATGAAAACATGGTTTTTTGTGGTGGGGTTTGTTCAAGCAATAGATATCATCAAGATGAAGAAAA
TTTGTTCAATTGGGAGAGAAACATAAAGAAAGATCTTAGTAGGATAAATCATGATAAGGAAAAAGAGCAAAAACTTGATCTTTCTCTCCATTTATAG
Protein sequenceShow/hide protein sequence
MEYEESLAKVVEIETNSNNNIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPSPTSLVFAASQQQHHPGLLPHPVYIAT
HGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQDEENLFNWERNIKKDLSRINHDKEKEQKLDLSLHL