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PI0026950 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026950
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationchr12:6237464..6238236
RNA-Seq ExpressionPI0026950
SyntenyPI0026950
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN65550.1 hypothetical protein Csa_019856 [Cucumis sativus]4.9e-11793.01Show/hide
Query:  MPPPPCLSLHYNFFSSLKQVEKRLKLDHSSQRDVLHPPPSLPVETNSSSSTEHSLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNSSQSPPSHPKSESNP
        +P PPCLSLH NFFSSLKQVEKRLKLDHSSQRDVLHPPP LPV TNSSS+ E SLSTPMYLHFPQTNTSSTLQESSQ PLEFLS+SSQSPPSHPKSESNP
Subjt:  MPPPPCLSLHYNFFSSLKQVEKRLKLDHSSQRDVLHPPPSLPVETNSSSSTEHSLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNSSQSPPSHPKSESNP

Query:  PNPIDCGQNRDVDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRSEPLRLAYLLLGKAVF
        P PID GQNRDVDDIQRLIQLLGLEDSCDEKE GAK GCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDR EPLRLAYLLLGKAVF
Subjt:  PNPIDCGQNRDVDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRSEPLRLAYLLLGKAVF

Query:  ASNGDDGCLEGLEFPSTVEDFLLNDPPAL
        ASN DDGCLEGLEFPSTVEDFLLNDPPAL
Subjt:  ASNGDDGCLEGLEFPSTVEDFLLNDPPAL

XP_004147438.2 uncharacterized protein LOC101217056 [Cucumis sativus]5.8e-11892.34Show/hide
Query:  MGENM--PPPPCLSLHYNFFSSLKQVEKRLKLDHSSQRDVLHPPPSLPVETNSSSSTEHSLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNSSQSPPSHP
        MGE M  P PPCLSLH NFFSSLKQVEKRLKLDHSSQRDVLHPPP LPV TNSSS+ E SLSTPMYLHFPQTNTSSTLQESSQ PLEFLS+SSQSPPSHP
Subjt:  MGENM--PPPPCLSLHYNFFSSLKQVEKRLKLDHSSQRDVLHPPPSLPVETNSSSSTEHSLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNSSQSPPSHP

Query:  KSESNPPNPIDCGQNRDVDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRSEPLRLAYLL
        KSESNPP PID GQNRDVDDIQRLIQLLGLEDSCDEKE GAK GCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDR EPLRLAYLL
Subjt:  KSESNPPNPIDCGQNRDVDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRSEPLRLAYLL

Query:  LGKAVFASNGDDGCLEGLEFPSTVEDFLLNDPPAL
        LGKAVFASN DDGCLEGLEFPSTVEDFLLNDPPAL
Subjt:  LGKAVFASNGDDGCLEGLEFPSTVEDFLLNDPPAL

XP_008444181.1 PREDICTED: uncharacterized protein LOC103487596 [Cucumis melo]5.4e-11689.92Show/hide
Query:  MGENM----PPPPCLSLHYNFFSSLKQVEKRLKLDHSSQRDVLHPPPSLPVETNSSSSTEHS-LSTPMYLHFPQTNTSSTLQESSQPPLEFLSNSSQSPP
        MGE M    PPPPCLSLH +FFSSLKQVEKRLKLDHSSQRDVLHPPP +PV+TN+SSSTE   LSTPMYLHFPQTNTSSTLQESSQPPLEFLSN S SPP
Subjt:  MGENM----PPPPCLSLHYNFFSSLKQVEKRLKLDHSSQRDVLHPPPSLPVETNSSSSTEHS-LSTPMYLHFPQTNTSSTLQESSQPPLEFLSNSSQSPP

Query:  SHPKSESNPPNPIDCGQNRDVDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRSEPLRLA
        SHPKS SNPPN ID GQNRD+DDIQRLIQLLGLEDSCDEKELG KIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGG EEDR EPLRLA
Subjt:  SHPKSESNPPNPIDCGQNRDVDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRSEPLRLA

Query:  YLLLGKAVFASNGDDGCLEGLEFPSTVEDFLLNDPPAL
        YLLLGKAVFASNGDDGCL+GLEFPSTVEDFLLNDPPAL
Subjt:  YLLLGKAVFASNGDDGCLEGLEFPSTVEDFLLNDPPAL

XP_022927255.1 uncharacterized protein LOC111434155 [Cucurbita moschata]2.6e-9476.45Show/hide
Query:  MGENMPPP-----PCLSLHYNFFSSLKQVEKRLKLDHSSQRDVLHPP-----PSLPVETNSSSSTEHSLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNS
        MGE MPPP     P +SLH +FFSSLKQVEKRLKLD+ SQRD L PP     PSLPVE +SSSS E SLSTPMYLH PQTNT+S+LQESS+PP EFLSNS
Subjt:  MGENMPPP-----PCLSLHYNFFSSLKQVEKRLKLDHSSQRDVLHPP-----PSLPVETNSSSSTEHSLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNS

Query:  SQSPPSHPKSESNPPNPIDCGQNRDVDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRSE
        S       KSESN PN IDCGQNR VDDIQRL+QLLGL DS +E+ELGA+ GCNGCEGCESGFYSKIVGLKGPKC KEVERLNGWI +F  GG E +R E
Subjt:  SQSPPSHPKSESNPPNPIDCGQNRDVDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRSE

Query:  PLRLAYLLLGKAVFASNGDDGCLEGLEFPSTVEDFLLNDPPA
        PLRLAYLL+GKAVFASNG D CLEGLEFPSTVEDFLLNDPPA
Subjt:  PLRLAYLLLGKAVFASNGDDGCLEGLEFPSTVEDFLLNDPPA

XP_038895328.1 uncharacterized protein LOC120083579 [Benincasa hispida]8.4e-10988.11Show/hide
Query:  PPPPCLSLHYNFFSSLKQVEKRLKLDHSSQRDVLHPPPSLPVETNSSSSTEHSLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNSSQSPPSHPKSESNPP
        PPPP +SLH NFFSSLKQVEKRLKLDH SQRDVLHPPPS PVETNSSSSTE SLSTPMYLHFPQTNT S LQESS+PPLEFLSNSSQSPPSHPKSESNP 
Subjt:  PPPPCLSLHYNFFSSLKQVEKRLKLDHSSQRDVLHPPPSLPVETNSSSSTEHSLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNSSQSPPSHPKSESNPP

Query:  NPIDCGQNRDVDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRSEPLRLAYLLLGKAVFA
          ID GQN  V DIQRLIQLLGL +SCDE ELGAK GCNGCEGCESGFYSKIVGLKGPKC+KEVERLNGWIEFFSNGG EE+R EPLRLAYLL GK+VFA
Subjt:  NPIDCGQNRDVDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRSEPLRLAYLLLGKAVFA

Query:  SNGDDGCLEGLEFPSTVEDFLLNDPPA
        SNGDDGCLEG+EFPSTVEDFLLNDPPA
Subjt:  SNGDDGCLEGLEFPSTVEDFLLNDPPA

TrEMBL top hitse value%identityAlignment
A0A0A0LUG6 Uncharacterized protein2.4e-11793.01Show/hide
Query:  MPPPPCLSLHYNFFSSLKQVEKRLKLDHSSQRDVLHPPPSLPVETNSSSSTEHSLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNSSQSPPSHPKSESNP
        +P PPCLSLH NFFSSLKQVEKRLKLDHSSQRDVLHPPP LPV TNSSS+ E SLSTPMYLHFPQTNTSSTLQESSQ PLEFLS+SSQSPPSHPKSESNP
Subjt:  MPPPPCLSLHYNFFSSLKQVEKRLKLDHSSQRDVLHPPPSLPVETNSSSSTEHSLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNSSQSPPSHPKSESNP

Query:  PNPIDCGQNRDVDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRSEPLRLAYLLLGKAVF
        P PID GQNRDVDDIQRLIQLLGLEDSCDEKE GAK GCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDR EPLRLAYLLLGKAVF
Subjt:  PNPIDCGQNRDVDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRSEPLRLAYLLLGKAVF

Query:  ASNGDDGCLEGLEFPSTVEDFLLNDPPAL
        ASN DDGCLEGLEFPSTVEDFLLNDPPAL
Subjt:  ASNGDDGCLEGLEFPSTVEDFLLNDPPAL

A0A1S3B9V1 uncharacterized protein LOC1034875962.6e-11689.92Show/hide
Query:  MGENM----PPPPCLSLHYNFFSSLKQVEKRLKLDHSSQRDVLHPPPSLPVETNSSSSTEHS-LSTPMYLHFPQTNTSSTLQESSQPPLEFLSNSSQSPP
        MGE M    PPPPCLSLH +FFSSLKQVEKRLKLDHSSQRDVLHPPP +PV+TN+SSSTE   LSTPMYLHFPQTNTSSTLQESSQPPLEFLSN S SPP
Subjt:  MGENM----PPPPCLSLHYNFFSSLKQVEKRLKLDHSSQRDVLHPPPSLPVETNSSSSTEHS-LSTPMYLHFPQTNTSSTLQESSQPPLEFLSNSSQSPP

Query:  SHPKSESNPPNPIDCGQNRDVDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRSEPLRLA
        SHPKS SNPPN ID GQNRD+DDIQRLIQLLGLEDSCDEKELG KIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGG EEDR EPLRLA
Subjt:  SHPKSESNPPNPIDCGQNRDVDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRSEPLRLA

Query:  YLLLGKAVFASNGDDGCLEGLEFPSTVEDFLLNDPPAL
        YLLLGKAVFASNGDDGCL+GLEFPSTVEDFLLNDPPAL
Subjt:  YLLLGKAVFASNGDDGCLEGLEFPSTVEDFLLNDPPAL

A0A5A7UHE6 Uncharacterized protein2.6e-11689.92Show/hide
Query:  MGENM----PPPPCLSLHYNFFSSLKQVEKRLKLDHSSQRDVLHPPPSLPVETNSSSSTEHS-LSTPMYLHFPQTNTSSTLQESSQPPLEFLSNSSQSPP
        MGE M    PPPPCLSLH +FFSSLKQVEKRLKLDHSSQRDVLHPPP +PV+TN+SSSTE   LSTPMYLHFPQTNTSSTLQESSQPPLEFLSN S SPP
Subjt:  MGENM----PPPPCLSLHYNFFSSLKQVEKRLKLDHSSQRDVLHPPPSLPVETNSSSSTEHS-LSTPMYLHFPQTNTSSTLQESSQPPLEFLSNSSQSPP

Query:  SHPKSESNPPNPIDCGQNRDVDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRSEPLRLA
        SHPKS SNPPN ID GQNRD+DDIQRLIQLLGLEDSCDEKELG KIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGG EEDR EPLRLA
Subjt:  SHPKSESNPPNPIDCGQNRDVDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRSEPLRLA

Query:  YLLLGKAVFASNGDDGCLEGLEFPSTVEDFLLNDPPAL
        YLLLGKAVFASNGDDGCL+GLEFPSTVEDFLLNDPPAL
Subjt:  YLLLGKAVFASNGDDGCLEGLEFPSTVEDFLLNDPPAL

A0A6J1END4 uncharacterized protein LOC1114341551.3e-9476.45Show/hide
Query:  MGENMPPP-----PCLSLHYNFFSSLKQVEKRLKLDHSSQRDVLHPP-----PSLPVETNSSSSTEHSLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNS
        MGE MPPP     P +SLH +FFSSLKQVEKRLKLD+ SQRD L PP     PSLPVE +SSSS E SLSTPMYLH PQTNT+S+LQESS+PP EFLSNS
Subjt:  MGENMPPP-----PCLSLHYNFFSSLKQVEKRLKLDHSSQRDVLHPP-----PSLPVETNSSSSTEHSLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNS

Query:  SQSPPSHPKSESNPPNPIDCGQNRDVDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRSE
        S       KSESN PN IDCGQNR VDDIQRL+QLLGL DS +E+ELGA+ GCNGCEGCESGFYSKIVGLKGPKC KEVERLNGWI +F  GG E +R E
Subjt:  SQSPPSHPKSESNPPNPIDCGQNRDVDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRSE

Query:  PLRLAYLLLGKAVFASNGDDGCLEGLEFPSTVEDFLLNDPPA
        PLRLAYLL+GKAVFASNG D CLEGLEFPSTVEDFLLNDPPA
Subjt:  PLRLAYLLLGKAVFASNGDDGCLEGLEFPSTVEDFLLNDPPA

A0A6J1KGL6 uncharacterized protein LOC1114955904.8e-9476.03Show/hide
Query:  MGENM-----PPPPCLSLHYNFFSSLKQVEKRLKLDHSSQRDVLHPP-----PSLPVETNSSSSTEHSLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNS
        MGE M     PPPP +SLH +FFSSLKQVEKRLKLD+ SQRD L PP     PSLPVE +SSSS E SLSTPMYLH  QTNT+S+LQESS+PP EFLSNS
Subjt:  MGENM-----PPPPCLSLHYNFFSSLKQVEKRLKLDHSSQRDVLHPP-----PSLPVETNSSSSTEHSLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNS

Query:  SQSPPSHPKSESNPPNPIDCGQNRDVDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRSE
        S       KSESN PN IDCGQNR VDDIQRL+QLLG  DS +EKELGA+ GCNGCEGCESGFYSKIVGLKGPKC KEVERLNGWI++F  GG E +R E
Subjt:  SQSPPSHPKSESNPPNPIDCGQNRDVDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRSE

Query:  PLRLAYLLLGKAVFASNGDDGCLEGLEFPSTVEDFLLNDPPA
        PLRLAYLL+GKAVFASNG D CLEGLEFPSTVEDFLLNDPPA
Subjt:  PLRLAYLLLGKAVFASNGDDGCLEGLEFPSTVEDFLLNDPPA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGAAAATATGCCGCCGCCACCGTGTTTATCTCTTCACTACAATTTCTTTTCCTCTCTAAAGCAGGTCGAAAAGCGCCTCAAATTAGATCATTCATCGCAACGAGA
CGTTCTTCATCCTCCACCGTCATTGCCAGTAGAAACTAATTCTTCTTCATCAACCGAACACTCACTGAGCACTCCCATGTACCTTCATTTCCCCCAAACCAACACAAGCT
CCACTCTACAAGAAAGCAGCCAACCGCCACTCGAATTCCTCTCAAATTCCTCCCAATCTCCACCATCTCATCCGAAATCAGAATCGAATCCTCCAAATCCCATCGATTGT
GGCCAAAATCGGGATGTAGACGACATTCAACGGCTAATTCAACTCCTAGGGTTAGAAGATTCGTGTGACGAAAAGGAATTAGGAGCTAAGATTGGCTGTAATGGCTGTGA
GGGATGTGAAAGCGGGTTCTACAGTAAGATTGTTGGCTTAAAAGGCCCCAAATGTAGAAAGGAGGTGGAGAGGCTAAATGGATGGATTGAGTTCTTTAGTAATGGTGGTG
ATGAAGAAGACAGGTCAGAGCCTCTTAGATTGGCGTATTTGCTGTTGGGGAAAGCTGTTTTTGCTTCTAATGGCGATGATGGATGTTTGGAAGGATTGGAATTCCCTTCA
ACTGTAGAGGATTTCTTGCTGAATGATCCTCCTGCATTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTGAAAATATGCCGCCGCCACCGTGTTTATCTCTTCACTACAATTTCTTTTCCTCTCTAAAGCAGGTCGAAAAGCGCCTCAAATTAGATCATTCATCGCAACGAGA
CGTTCTTCATCCTCCACCGTCATTGCCAGTAGAAACTAATTCTTCTTCATCAACCGAACACTCACTGAGCACTCCCATGTACCTTCATTTCCCCCAAACCAACACAAGCT
CCACTCTACAAGAAAGCAGCCAACCGCCACTCGAATTCCTCTCAAATTCCTCCCAATCTCCACCATCTCATCCGAAATCAGAATCGAATCCTCCAAATCCCATCGATTGT
GGCCAAAATCGGGATGTAGACGACATTCAACGGCTAATTCAACTCCTAGGGTTAGAAGATTCGTGTGACGAAAAGGAATTAGGAGCTAAGATTGGCTGTAATGGCTGTGA
GGGATGTGAAAGCGGGTTCTACAGTAAGATTGTTGGCTTAAAAGGCCCCAAATGTAGAAAGGAGGTGGAGAGGCTAAATGGATGGATTGAGTTCTTTAGTAATGGTGGTG
ATGAAGAAGACAGGTCAGAGCCTCTTAGATTGGCGTATTTGCTGTTGGGGAAAGCTGTTTTTGCTTCTAATGGCGATGATGGATGTTTGGAAGGATTGGAATTCCCTTCA
ACTGTAGAGGATTTCTTGCTGAATGATCCTCCTGCATTATAG
Protein sequenceShow/hide protein sequence
MGENMPPPPCLSLHYNFFSSLKQVEKRLKLDHSSQRDVLHPPPSLPVETNSSSSTEHSLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNSSQSPPSHPKSESNPPNPIDC
GQNRDVDDIQRLIQLLGLEDSCDEKELGAKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRSEPLRLAYLLLGKAVFASNGDDGCLEGLEFPS
TVEDFLLNDPPAL